Evolutionary relationship between chlorocatechol catabolic enzymes from Rhodococcus opacus 1CP and their counterparts in proteobacteria: sequence divergence and functional convergence.

scientific article published on March 1998

Evolutionary relationship between chlorocatechol catabolic enzymes from Rhodococcus opacus 1CP and their counterparts in proteobacteria: sequence divergence and functional convergence. is …
instance of (P31):
scholarly articleQ13442814

External links are
P932PMC publication ID106994
P698PubMed publication ID9495745

P2093author name stringL A Golovleva
M Schlömann
D Eulberg
E M Kourbatova
P2860cites workPurification and characterization of dichloromuconate cycloisomerase from Alcaligenes eutrophus JMP 134Q24527355
Chemical structure and biodegradability of halogenated aromatic compounds. Conversion of chlorinated muconic acids into maleoylacetic acidQ24530751
Improved tools for biological sequence comparisonQ24652199
Basic local alignment search toolQ25938991
The refined X-ray structure of muconate lactonizing enzyme from Pseudomonas putida PRS2000 at 1.85 A resolutionQ27729331
The alpha/beta hydrolase foldQ28156084
Cloning and characterization of plasmid-encoded genes for the degradation of 1,2-dichloro-, 1,4-dichloro-, and 1,2,4-trichlorobenzene of Pseudomonas sp. strain P51Q28334620
Sequence analysis of the Pseudomonas sp. strain P51 tcb gene cluster, which encodes metabolism of chlorinated catechols: evidence for specialization of catechol 1,2-dioxygenases for chlorinated substratesQ28335321
Different types of dienelactone hydrolase in 4-fluorobenzoate-utilizing bacteriaQ28335944
Identification of protein coding regions by database similarity searchQ29617233
Fast and sensitive multiple sequence alignments on a microcomputerQ29618252
Crystal structure of chloromuconate cycloisomerase from Alcaligenes eutrophus JMP134 (pJP4) at 3 A resolution.Q30194586
Organization and nucleotide sequence determination of a gene cluster involved in 3-chlorocatechol degradationQ34634784
Genetic rearrangements in plasmids specifying total degradation of chlorinated benzoic acidsQ67259843
Denaturants or cosolvents improve the specificity of PCR amplification of a G + C-rich DNA using genetically engineered DNA polymerasesQ72286231
Chlorocatechol 1,2-dioxygenase from Rhodococcus erythropolis 1CP. Kinetic and immunochemical comparison with analogous enzymes from gram-negative strainsQ72389648
Characterization of diverse 2,4-dichlorophenoxyacetic acid-degradative plasmids isolated from soil by complementationQ35184035
2,4-Dichlorophenoxyacetic acid-degrading bacteria contain mosaics of catabolic genes.Q35185634
Microbial breakdown of halogenated aromatic pesticides and related compoundsQ35355248
Discontinuities in the evolution of Pseudomonas putida cat genesQ35577519
catM encodes a LysR-type transcriptional activator regulating catechol degradation in Acinetobacter calcoaceticusQ35596735
Gene probe analysis of soil microbial populations selected by amendment with 2,4-dichlorophenoxyacetic acidQ35698834
Maximizing sensitivity and specificity of PCR by preamplification heatingQ35771071
Nucleotide sequence and initial functional characterization of the clcR gene encoding a LysR family activator of the clcABD chlorocatechol operon in Pseudomonas putidaQ35966343
Genetic and phenotypic diversity of 2,4-dichlorophenoxyacetic acid (2,4-D)-degrading bacteria isolated from 2,4-D-treated field soilsQ36054054
Discovery and characterization of a new transposable element, Tn4811, in Streptomyces lividans 66Q36136765
DNA sequences of genes encoding Acinetobacter calcoaceticus protocatechuate 3,4-dioxygenase: evidence indicating shuffling of genes and of DNA sequences within genes during their evolutionary divergence.Q36158267
Organization and sequence analysis of the 2,4-dichlorophenol hydroxylase and dichlorocatechol oxidative operons of plasmid pJP4Q36161998
Transcriptional regulation, nucleotide sequence, and localization of the promoter of the catBC operon in Pseudomonas putidaQ36195473
DNA sequence of the Acinetobacter calcoaceticus catechol 1,2-dioxygenase I structural gene catA: evidence for evolutionary divergence of intradiol dioxygenases by acquisition of DNA sequence repetitionsQ36219672
Characterization of aquatic bacteria and cloning of genes specifying partial degradation of 2,4-dichlorophenoxyacetic acid.Q36659662
Cloning, DNA Sequencing, and Amino Acid Sequencing of Catechol 1,2-Dioxygenases (Pyrocatechase) from Pseudomonas putida mt-2 and Pseudomonas arvilla C-1Q36690875
Crystallization and preliminary X-ray data of chloromuconate cycloisomerase from Alcaligenes eutrophus JMP134 (pJP4).Q36765000
Classification of catechol 1,2-dioxygenase family: sequence analysis of a gene for the catechol 1,2-dioxygenase showing high specificity for methylcatechols from Gram+ aniline-assimilating Rhodococcus erythropolis AN-13.Q36846679
Characterization of a protocatechuate catabolic gene cluster from Rhodococcus opacus 1CP: evidence for a merged enzyme with 4-carboxymuconolactone-decarboxylating and 3-oxoadipate enol-lactone-hydrolyzing activityQ39564777
Characterization of muconate and chloromuconate cycloisomerase from Rhodococcus erythropolis 1CP: indications for functionally convergent evolution among bacterial cycloisomerasesQ39836769
The tfdR gene product can successfully take over the role of the insertion element-inactivated TfdT protein as a transcriptional activator of the tfdCDEF gene cluster, which encodes chlorocatechol degradation in Ralstonia eutropha JMP134(pJP4)Q39843605
Characterization of catechol catabolic genes from Rhodococcus erythropolis 1CPQ39844012
Analysis of duplicated gene sequences associated with tfdR and tfdS in Alcaligenes eutrophus JMP134.Q39931502
Inability of muconate cycloisomerases to cause dehalogenation during conversion of 2-chloro-cis,cis-muconateQ39932720
Characterization of the Pseudomonas sp. strain P51 gene tcbR, a LysR-type transcriptional activator of the tcbCDEF chlorocatechol oxidative operon, and analysis of the regulatory regionQ39941940
Transposon mutagenesis and cloning analysis of the pathways for degradation of 2,4-dichlorophenoxyacetic acid and 3-chlorobenzoate in Alcaligenes eutrophus JMP134(pJP4).Q39966254
Chemical wastes and their biodegradation--an overviewQ40209686
Construction of T-vectors, a rapid and general system for direct cloning of unmodified PCR productsQ40531964
Evolution of chlorocatechol catabolic pathways. Conclusions to be drawn from comparisons of lactone hydrolasesQ40535918
Convergent evolution: the need to be explicitQ40731512
Unusual G + C content and codon usage in catIJF, a segment of the ben-cat supra-operonic cluster in the Acinetobacter calcoaceticus chromosomeQ42602983
Acquisition of apparent DNA slippage structures during extensive evolutionary divergence of pcaD and catD genes encoding identical catalytic activities in Acinetobacter calcoaceticusQ42605665
A family of IS1031 elements in the genome of Acetobacter xylinum: nucleotide sequences and strain distributionQ42618002
Genetic organization, nucleotide sequence and regulation of expression of genes encoding phenol hydroxylase and catechol 1,2-dioxygenase in Acinetobacter calcoaceticus NCIB8250.Q42627847
Chemical structure and biodegradability of halogenated aromatic compounds. Substituent effects on 1,2-dioxygenation of catecholQ42935823
Genetic and molecular analysis of a regulatory region of the herbicide 2,4-dichlorophenoxyacetate catabolic plasmid pJP4.Q46319795
pBluescriptII: multifunctional cloning and mapping vectorsQ46737419
Sequence analysis of the 2,4-dichlorophenol hydroxylase gene tfdB and 3,5-dichlorocatechol 1,2-dioxygenase gene tfdC of 2,4-dichlorophenoxyacetic acid degrading plasmid pEST4011.Q48059161
Cloning and characterization of a gene coding for the catechol 1,2-dioxygenase of Arthrobacter sp. mA3.Q48136865
Sequence of the plasmid-encoded catechol 1,2-dioxygenase-expressing gene, pheB, of phenol-degrading Pseudomonas sp. strain EST1001.Q48236327
P433issue5
P407language of work or nameEnglishQ1860
P921main subjectProteobacteriaQ130999
Rhodococcus opacusQ16989149
P304page(s)1082-1094
P577publication date1998-03-01
P1433published inJournal of BacteriologyQ478419
P1476titleEvolutionary relationship between chlorocatechol catabolic enzymes from Rhodococcus opacus 1CP and their counterparts in proteobacteria: sequence divergence and functional convergence
P478volume180

Reverse relations

cites work (P2860)
Q39680415A new modified ortho cleavage pathway of 3-chlorocatechol degradation by Rhodococcus opacus 1CP: genetic and biochemical evidence
Q33937410Amino acids in positions 48, 52, and 73 differentiate the substrate specificities of the highly homologous chlorocatechol 1,2-dioxygenases CbnA and TcbC.
Q39564777Characterization of a protocatechuate catabolic gene cluster from Rhodococcus opacus 1CP: evidence for a merged enzyme with 4-carboxymuconolactone-decarboxylating and 3-oxoadipate enol-lactone-hydrolyzing activity
Q33601998Characterization of a second tfd gene cluster for chlorophenol and chlorocatechol metabolism on plasmid pJP4 in Ralstonia eutropha JMP134(pJP4)
Q39566626Characterization of the maleylacetate reductase MacA of Rhodococcus opacus 1CP and evidence for the presence of an isofunctional enzyme
Q28351206Chlorocatechols substituted at positions 4 and 5 are substrates of the broad-spectrum chlorocatechol 1,2-dioxygenase of Pseudomonas chlororaphis RW71
Q42006049Chloromethylmuconolactones as critical metabolites in the degradation of chloromethylcatechols: recalcitrance of 2-chlorotoluene
Q33987334Chromosomal integration of tcb chlorocatechol degradation pathway genes as a means of expanding the growth substrate range of bacteria to include haloaromatics
Q39503322Cloning and characterization of the gene cluster for palatinose metabolism from the phytopathogenic bacterium Erwinia rhapontici.
Q42200497Crystallization and preliminary characterization of chloromuconolactone dehalogenase from Rhodococcus opacus 1CP
Q34766809Expression of chlorocatechol 1,2-dioxygenase and chlorocatechol 2,3-dioxygenase genes in chlorobenzene-contaminated subsurface samples
Q42232506Identification of a novel self-sufficient styrene monooxygenase from Rhodococcus opacus 1CP.
Q39679890Importance of different tfd genes for degradation of chloroaromatics by Ralstonia eutropha JMP134
Q28343703Mechanism of chloride elimination from 3-chloro- and 2,4-dichloro-cis,cis-muconate: new insight obtained from analysis of muconate cycloisomerase variant CatB-K169A
Q48084982Novel organization of catechol meta pathway genes in the nitrobenzene degrader Comamonas sp. JS765 and its evolutionary implication
Q33986964Role of tfdC(I)D(I)E(I)F(I) and tfdD(II)C(II)E(II)F(II) gene modules in catabolism of 3-chlorobenzoate by Ralstonia eutropha JMP134(pJP4).
Q33719711Substrate specificity of and product formation by muconate cycloisomerases: an analysis of wild-type enzymes and engineered variants
Q33984281The chlorocatechol-catabolic transposon Tn5707 of Alcaligenes eutrophus NH9, carrying a gene cluster highly homologous to that in the 1,2,4-trichlorobenzene-degrading bacterium Pseudomonas sp. strain P51, confers the ability to grow on 3-chlorobenzo
Q39679842Two chlorocatechol catabolic gene modules on plasmid pJP4.

Search more.