StochHMM: a flexible hidden Markov model tool and C++ library.

scientific article

StochHMM: a flexible hidden Markov model tool and C++ library. is …
instance of (P31):
scholarly articleQ13442814

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P8978DBLP publication IDjournals/bioinformatics/LottK14
P356DOI10.1093/BIOINFORMATICS/BTU057
P932PMC publication ID4029032
P698PubMed publication ID24489371
P5875ResearchGate publication ID260063053

P50authorPaul LottQ46502662
P2093author name stringIan Korf
P2860cites workGene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sourcesQ25257211
R-loop formation is a distinctive characteristic of unmethylated human CpG island promotersQ34258378
GC skew at the 5' and 3' ends of human genes links R-loop formation to epigenetic regulation and transcription terminationQ34358463
AUGUSTUS: ab initio prediction of alternative transcriptsQ34548015
Large-scale methylation domains mark a functional subset of neuronally expressed genes.Q35451679
The human placenta methylomeQ36762410
HMMCONVERTER 1.0: a toolbox for hidden Markov modelsQ38434163
HMMoC--a compiler for hidden Markov modelsQ38440656
A generalized hidden Markov model for the recognition of human genes in DNA.Q45967570
MAMOT: hidden Markov modeling toolQ46184949
HMM sampling and applications to gene finding and alternative splicingQ62493432
P433issue11
P407language of work or nameEnglishQ1860
P921main subjecthidden Markov modelQ176769
Markov modelQ6771326
P304page(s)1625-1626
P577publication date2014-01-30
P1433published inBioinformaticsQ4914910
P1476titleStochHMM: a flexible hidden Markov model tool and C++ library
P478volume30

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cites work (P2860)
Q37347992A New Advanced Backcross Tomato Population Enables High Resolution Leaf QTL Mapping and Gene Identification
Q59699637Characterization of the canine immunoglobulin heavy chain repertoire by next generation sequencing
Q28602773Consistency of VDJ Rearrangement and Substitution Parameters Enables Accurate B Cell Receptor Sequence Annotation
Q36676606GC skew is a conserved property of unmethylated CpG island promoters across vertebrates
Q35925694Genome-wide DNA hypomethylation and RNA:DNA hybrid accumulation in Aicardi-Goutières syndrome
Q29109555Placental methylome analysis from a prospective autism study
Q38637885Self-reported pregnancy exposures and placental DNA methylation in the MARBLES prospective autism sibling study
Q92450124Topology and expressed repertoire of the Felis catus T cell receptor loci

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