| P50 | author | Frederic Chedin | Q77179826 |
| P2093 | author name string | Ian F Korf | |
| | Stella R Hartono | |
| P2860 | cites work | Human senataxin resolves RNA/DNA hybrids formed at transcriptional pause sites to promote Xrn2-dependent termination | Q24307617 |
| | RNA exosome depletion reveals transcription upstream of active human promoters | Q24321777 |
| | Structural basis for recognition of H3K4 methylation status by the DNA methyltransferase 3A ATRX-DNMT3-DNMT3L domain | Q24336418 |
| | Ensembl 2014 | Q24567767 |
| | Human DNA methylomes at base resolution show widespread epigenomic differences | Q24633677 |
| | Epigenetic conservation at gene regulatory elements revealed by non-methylated DNA profiling in seven vertebrates | Q36640718 |
| | Transcription induces strand-specific mutations at the 5' end of human genes | Q36804846 |
| | Global regulation of promoter melting in naive lymphocytes | Q36935665 |
| | ZF-CxxC domain-containing proteins, CpG islands and the chromatin connection | Q36936680 |
| | Promoter directionality is controlled by U1 snRNP and polyadenylation signals | Q37038710 |
| | CpG islands influence chromatin structure via the CpG-binding protein Cfp1. | Q37061200 |
| | G clustering is important for the initiation of transcription-induced R-loops in vitro, whereas high G density without clustering is sufficient thereafter | Q37192001 |
| | CpG islands--'a rough guide'. | Q37450048 |
| | Divergent transcription: a driving force for new gene origination? | Q37508064 |
| | Transcription-coupled and splicing-coupled strand asymmetries in eukaryotic genomes | Q37563647 |
| | Genomic patterns and context specific interpretation of DNA methylation | Q38194829 |
| | Evidence that protein binding specifies sites of DNA demethylation | Q39444301 |
| | Selected base sequence outside the target binding site of zinc finger protein Sp1. | Q39516111 |
| | Loss of splicing factor ASF/SF2 induces G2 cell cycle arrest and apoptosis, but inhibits internucleosomal DNA fragmentation | Q39705452 |
| | DNA-binding factors shape the mouse methylome at distal regulatory regions | Q42818364 |
| | Recombinant mammalian DNA methyltransferase activity on model transcriptional gene silencing short RNA-DNA heteroduplex substrates | Q42905785 |
| | Competition between the RNA transcript and the nontemplate DNA strand during R-loop formation in vitro: a nick can serve as a strong R-loop initiation site | Q42947445 |
| | Identification of genetic elements that autonomously determine DNA methylation states. | Q51852051 |
| | A fraction of the mouse genome that is derived from islands of nonmethylated, CpG-rich DNA | Q64441637 |
| | Stability and Properties of Double and Triple Helices: Dramatic Effects of RNA or DNA Backbone Composition | Q67464150 |
| | Sequence specific thermodynamic and structural properties for DNA.RNA duplexes | Q71621842 |
| | DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA | Q24645346 |
| | Comprehensive analysis of the base composition around the transcription start site in Metazoa | Q24796884 |
| | CpG islands in vertebrate genomes | Q27861045 |
| | Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters | Q28302903 |
| | CpG islands and the regulation of transcription | Q28315762 |
| | Chromosomal DNA demethylation specified by protein binding | Q28360836 |
| | CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes | Q29547486 |
| | Divergent transcription from active promoters | Q29614332 |
| | The long-range interaction landscape of gene promoters | Q29615403 |
| | Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation | Q29615949 |
| | Genome-wide analysis of mammalian promoter architecture and evolution | Q29616717 |
| | DNA methylation: roles in mammalian development | Q29616796 |
| | DNA methylation landscapes: provocative insights from epigenomics | Q29617144 |
| | Global epigenomic reconfiguration during mammalian brain development | Q29617800 |
| | The NIH Roadmap Epigenomics Mapping Consortium | Q29619856 |
| | A genome-wide siRNA screen reveals diverse cellular processes and pathways that mediate genome stability | Q33489221 |
| | StochHMM: a flexible hidden Markov model tool and C++ library. | Q33641957 |
| | Chromosomal redistribution of male-biased genes in mammalian evolution with two bursts of gene gain on the X chromosome | Q33722055 |
| | Dynamic changes in the human methylome during differentiation | Q33736539 |
| | Epigenetic memory at embryonic enhancers identified in DNA methylation maps from adult mouse tissues | Q33893082 |
| | Chromatin and sequence features that define the fine and gross structure of genomic methylation patterns. | Q33940969 |
| | Mechanisms and implications of transcription blockage by guanine-rich DNA sequences. | Q34059204 |
| | Genome-wide evolutionary analysis of eukaryotic DNA methylation. | Q34110385 |
| | Primate CpG islands are maintained by heterogeneous evolutionary regimes involving minimal selection | Q34188001 |
| | R-loops at immunoglobulin class switch regions in the chromosomes of stimulated B cells | Q34188845 |
| | DNA methylation and the frequency of CpG in animal DNA. | Q34252001 |
| | R-loop formation is a distinctive characteristic of unmethylated human CpG island promoters | Q34258378 |
| | R loops: from transcription byproducts to threats to genome stability | Q34271508 |
| | GC skew at the 5' and 3' ends of human genes links R-loop formation to epigenetic regulation and transcription termination | Q34358463 |
| | Downstream boundary of chromosomal R-loops at murine switch regions: implications for the mechanism of class switch recombination | Q34596833 |
| | Protection of CpG islands against de novo DNA methylation during oogenesis is associated with the recognition site of E2f1 and E2f2. | Q34631463 |
| | On the nature of human housekeeping genes | Q34825854 |
| | Understanding the relationship between DNA methylation and histone lysine methylation | Q35046027 |
| | Transcription factor occupancy can mediate active turnover of DNA methylation at regulatory regions. | Q35075152 |
| | The spatiotemporal program of DNA replication is associated with specific combinations of chromatin marks in human cells | Q35160747 |
| | Transcription-induced mutations: increase in C to T mutations in the nontranscribed strand during transcription in Escherichia coli | Q35937258 |
| | Directional DNA methylation changes and complex intermediate states accompany lineage specificity in the adult hematopoietic compartment | Q36142013 |
| P433 | issue | 20 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | CpG island | Q1138360 |
| P1104 | number of pages | 13 | |
| P304 | page(s) | 9729-9741 | |
| P577 | publication date | 2015-08-07 | |
| P1433 | published in | Nucleic Acids Research | Q135122 |
| P1476 | title | GC skew is a conserved property of unmethylated CpG island promoters across vertebrates | |
| P478 | volume | 43 | |