Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing

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Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1020645631
P356DOI10.1038/ISMEJ.2010.112
P932PMC publication ID3105721
P698PubMed publication ID20668490
P5875ResearchGate publication ID45406862

P50authorStanley C K LauQ55427542
Feras F LafiQ55687719
P2093author name stringYong Wang
Pei-Yuan Qian
Jiangke Yang
On On Lee
Abdulaziz Al-Suwailem
Tim Y H Wong
P2860cites workUse of 16S ribosomal DNA for delineation of marine bacterioplankton speciesQ34101072
SAR11 clade dominates ocean surface bacterioplankton communities.Q34165899
DNA recovery from soils of diverse composition.Q35188380
Manganese binding and oxidation by spores of a marine bacillusQ36388748
Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environmentQ36802597
Biogeography and degree of endemicity of fluorescent Pseudomonas strains in soilQ39488782
Arsenic resistance in Halobacterium sp. strain NRC-1 examined by using an improved gene knockout system.Q40816248
Manganese(II)-oxidizing Bacillus spores in Guaymas Basin hydrothermal sediments and plumesQ41919431
14C-Catecholamine Synthesis in Mouse Brain during Morphine WithdrawalQ48714717
Connate Origin Proposed for Hot Salty Bottom Water from a Red Sea BasinQ59005956
Hot Salty Water at the Bottom of the Red SeaQ59069108
The development and impact of 454 sequencingQ82255359
Non-parametric multivariate analyses of changes in community structureQ104206070
Environmental shotgun sequencing: its potential and challenges for studying the hidden world of microbesQ21092764
Genome sequencing in microfabricated high-density picolitre reactorsQ24544260
Microbial diversity of the brine-seawater interface of the Kebrit Deep, Red Sea, studied via 16S rRNA gene sequences and cultivation methodsQ24549971
MUSCLE: multiple sequence alignment with high accuracy and high throughputQ24613456
Pyrosequencing enumerates and contrasts soil microbial diversityQ24616826
A core gut microbiome in obese and lean twinsQ24649648
Phylogenetic identification and in situ detection of individual microbial cells without cultivationQ24651527
Microbial diversity in the deep sea and the underexplored "rare biosphere"Q24685531
Environmental genome shotgun sequencing of the Sargasso SeaQ27860605
A sequencing method based on real-time pyrophosphateQ28279786
The Ribosomal Database Project: improved alignments and new tools for rRNA analysisQ29547434
UniFrac: a new phylogenetic method for comparing microbial communitiesQ29547435
Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richnessQ29614293
Community genomics among stratified microbial assemblages in the ocean's interiorQ29614711
Prokaryotic phylogenetic diversity and corresponding geochemical data of the brine-seawater interface of the Shaban Deep, Red Sea.Q30750892
Poles apart: biodiversity and biogeography of sea ice bacteriaQ30806509
Geographic barriers isolate endemic populations of hyperthermophilic archaeaQ30969227
Community composition of marine bacterioplankton determined by 16S rRNA gene clone libraries and fluorescence in situ hybridizationQ30972191
Global patterns of diversity and community structure in marine bacterioplankton.Q33272481
Polymerase chain reaction primers miss half of rRNA microbial diversityQ33495081
Conservative fragments in bacterial 16S rRNA genes and primer design for 16S ribosomal DNA amplicons in metagenomic studiesQ33509522
Prevalence of the Chloroflexi-related SAR202 bacterioplankton cluster throughout the mesopelagic zone and deep oceanQ33708503
Uncultured archaea in deep marine subsurface sediments: have we caught them all?Q34009273
P433issue3
P921main subjectRed SeaQ23406
pyrosequencingQ2342248
P304page(s)507-518
P577publication date2010-07-29
P1433published inThe ISME JournalQ7741240
P1476titleVertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing
P478volume5

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cites work (P2860)
Q3091607416S rRNA gene high-throughput sequencing data mining of microbial diversity and interactions
Q34101452454 pyrosequencing reveals bacterial diversity of activated sludge from 14 sewage treatment plants
Q30489533A catalogue of 136 microbial draft genomes from Red Sea metagenomes.
Q59806112Activated sludge bacterial communities of typical wastewater treatment plants: distinct genera identification and metabolic potential differential analysis
Q35311748Aerobic methanotrophic communities at the Red Sea brine-seawater interface
Q36190930Amplicon-based profiling of bacteria in raw and secondary treated wastewater from treatment plants across Australia.
Q57230247An Updated View of the Microbial Diversity in Deep Hypersaline Anoxic Basins
Q55277574Analysis of Bacterial Community Structure of Activated Sludge from Wastewater Treatment Plants in Winter.
Q33943054Analysis of the bacterial community in a laboratory-scale nitrification reactor and a wastewater treatment plant by 454-pyrosequencing.
Q37348797Bacterial abundance and diversity in pond water supplied with different feeds
Q42144795Bacterial and diazotrophic diversities of endophytes in Dendrobium catenatum determined through barcoded pyrosequencing.
Q34255646Bacterial communities in different sections of a municipal wastewater treatment plant revealed by 16S rDNA 454 pyrosequencing.
Q35614309Bacterial communities of Beijing surface waters as revealed by 454 pyrosequencing of the 16S rRNA gene
Q46550842Bacterial community composition in the water column of the deepest freshwater Lake Baikal as determined by next-generation sequencing.
Q30904823Bacterial diversity in native habitats of the medicinal fungus Ophiocordyceps sinensis on Tibetan Plateau as determined using Illumina sequencing data
Q35887300Biodiversity patterns of plankton assemblages at the extremes of the Red Sea.
Q34088485Biogeography of pelagic bacterioplankton across an antagonistic temperature-salinity gradient in the Red Sea.
Q36377114Building a bio-based industry in the Middle East through harnessing the potential of the Red Sea biodiversity
Q45038751Characterization of bacterial communities in sediments receiving various wastewater effluents with high-throughput sequencing analysis
Q35153851Characterization of biofouling in a lab-scale forward osmosis membrane bioreactor (FOMBR).
Q53121010Characterization of tetracycline resistant bacterial community in saline activated sludge using batch stress incubation with high-throughput sequencing analysis.
Q34491245Combined analyses of the ITS loci and the corresponding 16S rRNA genes reveal high micro- and macrodiversity of SAR11 populations in the Red Sea.
Q91893446Community Structure and Abundance of Archaea in a Zostera marina Meadow: A Comparison between Seagrass-Colonized and Bare Sediment Sites
Q34307046Comparative survey of rumen microbial communities and metabolites across one caprine and three bovine groups, using bar-coded pyrosequencing and ¹H nuclear magnetic resonance spectroscopy
Q46939195Composition of Archaea in seawater, sediment, and sponges in the Kepulauan Seribu reef system, Indonesia.
Q58053955Descent toward the Icehouse: Eocene sea surface cooling inferred from GDGT distributions
Q92867400Distinct temporal dynamics of planktonic archaeal and bacterial assemblages in the bays of the Yellow Sea
Q34642681Distinctive microbial community structure in highly stratified deep-sea brine water columns
Q50195790Distribution of bacterial communities along the spatial and environmental gradients from Bohai Sea to northern Yellow Sea.
Q53091154Distribution patterns of bacterioplankton in the oligotrophic south-eastern Mediterranean Sea.
Q37268170Diversification and niche adaptations of Nitrospina-like bacteria in the polyextreme interfaces of Red Sea brines.
Q34785441Diversity of Microbial Communities in Production and Injection Waters of Algerian Oilfields Revealed by 16S rRNA Gene Amplicon 454 Pyrosequencing
Q34959044Diversity of picoeukaryotes at an oligotrophic site off the Northeastern Red Sea Coast
Q35682064Earthworms modify microbial community structure and accelerate maize stover decomposition during vermicomposting
Q47805554Effect of hydraulic retention time (HRT) on the biodegradation of trichloroethylene wastewater and anaerobic bacterial community in the UASB reactor
Q57534369Effects of Seasonal Thermal Stratification on the Functional Diversity and Composition of the Microbial Community in a Drinking Water Reservoir
Q37733095Effects of water stratification and mixing on microbial community structure in a subtropical deep reservoir
Q34296018Evolution of antibiotic resistance, catabolic pathways and niche colonization.
Q35796030Illumina-based analysis of bacterial diversity related to halophytes Salicornia europaea and Sueada aralocaspica
Q35055858Isolation and characterization of a heavy metal-resistant, thermophilic esterase from a Red Sea brine pool.
Q31138327Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone
Q37582313Microbial communities mediating algal detritus turnover under anaerobic conditions
Q39574342Microbial diversity and activity in seafloor brine lake sediments (Alaminos Canyon block 601, Gulf of Mexico).
Q38659105Microbial planktonic communities in the Red Sea: high levels of spatial and temporal variability shaped by nutrient availability and turbulence
Q35165653Molecular-based approaches to characterize coastal microbial community and their potential relation to the trophic state of Red Sea.
Q35122061Novel microbial populations in ambient and mesophilic biogas-producing and phenol-degrading consortia unraveled by high-throughput sequencing
Q53569314Operation performance and microbial community dynamics of phosphorus removal sludge with different electron acceptors.
Q35732094Permeable Reactive Barriers Designed To Mitigate Eutrophication Alter Bacterial Community Composition and Aquifer Redox Conditions
Q21559535Phylogenetic diversity of the Bacillus pumilus group and the marine ecotype revealed by multilocus sequence analysis
Q37031988Potential sources of microbial colonizers in an initial soil ecosystem after retreat of an alpine glacier
Q92446616Production and Characterization of Bioplastic by Polyhydroxybutyrate Accumulating Erythrobacter aquimaris Isolated from Mangrove Rhizosphere
Q34356077Pyrosequencing analysis of bacterial diversity in 14 wastewater treatment systems in China
Q34631567Pyrosequencing assessment of prokaryotic and eukaryotic diversity in biofilm communities from a French river
Q45761524Pyrosequencing reveals higher impact of silver nanoparticles than Ag+ on the microbial community structure of activated sludge
Q58814611Ring Index: A new strategy to evaluate the integrity of TEX86paleothermometry
Q90093995Seasonal variability and vertical distribution of autotrophic and heterotrophic picoplankton in the Central Red Sea
Q37424857Silver Nanoparticles Impact Biofilm Communities and Mussel Settlement
Q57900422Spatial Variations of Prokaryotic Communities in Surface Water from India Ocean to Chinese Marginal Seas and their Underlining Environmental Determinants
Q34584112Spatial variations in microbial community composition in surface seawater from the ultra-oligotrophic center to rim of the South Pacific Gyre
Q30593542Species sorting during biofilm assembly by artificial substrates deployed in a cold seep system
Q38546630Studies on the Red Sea Sponge Haliclona sp. for its Chemical and Cytotoxic Properties.
Q34933742Temporal and vertical distributions of bacterioplankton at the Gray's Reef National Marine Sanctuary
Q35842571Temporal-spatial variation of bacterial diversity in estuary sediments in the south of Zhejiang Province, China
Q21133768The discovery of stromatolites developing at 3570 m above sea level in a high-altitude volcanic lake Socompa, Argentinean Andes
Q35713372The dynamics of the bacterial diversity in the redox transition and anoxic zones of the Cariaco Basin assessed by parallel tag sequencing
Q58110712Toxicity responses of bacterial community as a biological indicator after repeated exposure to lead (Pb) in the presence of decabromodiphenyl ether (BDE209)
Q43318140Two-stage biogas production by co-digesting molasses wastewater and sewage sludge.
Q34391095Unique prokaryotic consortia in geochemically distinct sediments from Red Sea Atlantis II and discovery deep brine pools.
Q35013664Unveiling abundance and distribution of planktonic Bacteria and Archaea in a polynya in Amundsen Sea, Antarctica
Q91711666Vertical Beta-Diversity of Bacterial Communities Depending on Water Stratification
Q61449176Vertical Stratification of Sediment Microbial Communities Along Geochemical Gradients of a Subterranean Estuary Located at the Gloucester Beach of Virginia, United States
Q40594337Viruses-to-mobile genetic elements skew in the deep Atlantis II brine pool sediments.
Q35076750Water stratification affects the microeukaryotic community in a subtropical deep reservoir.
Q37349196mdRNA-Seq analysis of marine microbial communities from the northern Red Sea.
Q39797228pH levels drive bacterial community structure in sediments of the Qiantang River as determined by 454 pyrosequencing

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