| scholarly article | Q13442814 |
| P2093 | author name string | P A Williams | |
| M Wild | |||
| S L Fuenmayor | |||
| A L Boyes | |||
| P2860 | cites work | Bacterial metabolism of naphthalene: construction and use of recombinant bacteria to study ring cleavage of 1,2-dihydroxynaphthalene and subsequent reactions | Q24679821 |
| Metabolism of dibenzothiophene and naphthalene in Pseudomonas strains: complete DNA sequence of an upper naphthalene catabolic pathway | Q24681768 | ||
| Naphthalene dioxygenase: purification and properties of a terminal oxygenase component | Q24685253 | ||
| Basic local alignment search tool | Q25938991 | ||
| Detection of specific sequences among DNA fragments separated by gel electrophoresis | Q25939003 | ||
| Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors | Q26778475 | ||
| Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes | Q27860623 | ||
| Rubredoxin reductase of Pseudomonas oleovorans. Structural relationship to other flavoprotein oxidoreductases based on one NAD and two FAD fingerprints | Q28280271 | ||
| Initial reactions in the oxidation of naphthalene by Pseudomonas putida | Q28285911 | ||
| 4-Toluene sulfonate methyl-monooxygenase from Comamonas testosteroni T-2: purification and some properties of the oxygenase component | Q28328219 | ||
| Organization and evolution of naphthalene catabolic pathways: sequence of the DNA encoding 2-hydroxychromene-2-carboxylate isomerase and trans-o-hydroxybenzylidenepyruvate hydratase-aldolase from the NAH7 plasmid | Q28369173 | ||
| Catalytic function of tyrosine residues in para-hydroxybenzoate hydroxylase as determined by the study of site-directed mutants | Q28493173 | ||
| A rapid boiling method for the preparation of bacterial plasmids | Q29615281 | ||
| Fast and sensitive multiple sequence alignments on a microcomputer | Q29618252 | ||
| Transmissible Plasmid Coding Early Enzymes of Naphthalene Oxidation in Pseudomonas putida | Q33784915 | ||
| General Method for the Isolation of Plasmid Deoxyribonucleic Acid | Q33790768 | ||
| Functional and evolutionary relationships among diverse oxygenases | Q33972461 | ||
| Purification and properties of gentisate 1,2-dioxygenase from Moraxella osloensis | Q34333079 | ||
| Cloning and sequencing of two tandem genes involved in degradation of 2,3-dihydroxybiphenyl to benzoic acid in the polychlorinated biphenyl-degrading soil bacterium Pseudomonas sp. strain KKS102. | Q35424732 | ||
| Homology between nucleotide sequences of promoter regions of nah and sal operons of NAH7 plasmid of Pseudomonas putida | Q35586292 | ||
| Isolation and preliminary characterization of the subunits of the terminal component of naphthalene dioxygenase from Pseudomonas putida NCIB 9816-4. | Q36122173 | ||
| Nucleotide sequences of the Acinetobacter calcoaceticus benABC genes for benzoate 1,2-dioxygenase reveal evolutionary relationships among multicomponent oxygenases | Q36152441 | ||
| Purification and properties of NADH-ferredoxinNAP reductase, a component of naphthalene dioxygenase from Pseudomonas sp. strain NCIB 9816. | Q36157496 | ||
| Purification and properties of ferredoxinNAP, a component of naphthalene dioxygenase from Pseudomonas sp. strain NCIB 9816. | Q36157509 | ||
| Demonstration, characterization, and mutational analysis of NahR protein binding to nah and sal promoters. | Q36174183 | ||
| Complete nucleotide sequence and polypeptide analysis of multicomponent phenol hydroxylase from Pseudomonas sp. strain CF600. | Q36191694 | ||
| Plasmid gene organization: naphthalene/salicylate oxidation | Q36280676 | ||
| Oxidation of naphthalene by a multicomponent enzyme system from Pseudomonas sp. strain NCIB 9816. | Q36310523 | ||
| Molecular characterization of 4-hydroxyphenylacetate 3-hydroxylase of Escherichia coli. A two-protein component enzyme | Q36739114 | ||
| 2,4-Dinitrotoluene dioxygenase from Burkholderia sp. strain DNT: similarity to naphthalene dioxygenase | Q39842396 | ||
| Identification and characterization of genes encoding polycyclic aromatic hydrocarbon dioxygenase and polycyclic aromatic hydrocarbon dihydrodiol dehydrogenase in Pseudomonas putida OUS82. | Q39931564 | ||
| Metabolism of toluene and xylenes by Pseudomonas (putida (arvilla) mt-2: evidence for a new function of the TOL plasmid | Q40036071 | ||
| Comparative molecular analysis of genes for polycyclic aromatic hydrocarbon degradation | Q41507009 | ||
| Transcription of the TOL plasmid toluate catabolic pathway operon of Pseudomonas putida is determined by a pair of co-ordinately and positively regulated overlapping promoters | Q41582704 | ||
| Oxidative metabolism of naphthalene by soil pseudomonads. The ring-fission mechanism | Q42049423 | ||
| The Pseudomonas oleovorans alkBAC operon encodes two structurally related rubredoxins and an aldehyde dehydrogenase. | Q42195438 | ||
| Expression of Naphthalene Oxidation Genes in Escherichia coli Results in the Biosynthesis of Indigo | Q42247533 | ||
| The 4-hydroxy-2-oxovalerate aldolase and acetaldehyde dehydrogenase (acylating) encoded by the nahM and nahO genes of the naphthalene catabolic plasmid pWW60-22 provide further evidence of conservation of meta-cleavage pathway gene sequences | Q42274774 | ||
| Sequences of genes encoding naphthalene dioxygenase in Pseudomonas putida strains G7 and NCIB 9816-4. | Q42622124 | ||
| Cloning and sequencing of the genes encoding 2-nitrotoluene dioxygenase from Pseudomonas sp. JS42. | Q42646852 | ||
| Cloning, nucleotide sequence and characterization of genes encoding naphthalene dioxygenase of Pseudomonas putida strain NCIB9816. | Q42655847 | ||
| Characterization of polycyclic aromatic hydrocarbons degradative soil Pseudomonas | Q43496288 | ||
| Sequencing of Comamonas testosteroni strain B-356-biphenyl/chlorobiphenyl dioxygenase genes: evolutionary relationships among Gram-negative bacterial biphenyl dioxygenases | Q48059186 | ||
| New Pathways in the Oxidative Metabolism of Aromatic Compounds by Micro-Organisms | Q59050207 | ||
| Comparison of the meta pathway operons on NAH plasmid pWW60-22 and TOL plasmid pWW53-4 and its evolutionary significance | Q68085237 | ||
| Analysis of the active site of the flavoprotein p-hydroxybenzoate hydroxylase and some ideas with respect to its reaction mechanism | Q68780211 | ||
| Purification and characterization of salicylate hydroxylase from Pseudomonas putida PpG7 | Q68839115 | ||
| Rapid Methods for the Study of both Stable and Unstable Plasmids in Pseudomonas | Q72920858 | ||
| P433 | issue | 9 | |
| P407 | language of work or name | English | Q1860 |
| P304 | page(s) | 2522-2530 | |
| P577 | publication date | 1998-05-01 | |
| P1433 | published in | Journal of Bacteriology | Q478419 |
| P1476 | title | A gene cluster encoding steps in conversion of naphthalene to gentisate in Pseudomonas sp. strain U2. | |
| P478 | volume | 180 |
| Q39587065 | A novel phenanthrene dioxygenase from Nocardioides sp. Strain KP7: expression in Escherichia coli. |
| Q54578546 | A targeted real-time PCR assay for studying naphthalene degradation in the environment. |
| Q28775687 | Abundance of dioxygenase genes similar to Ralstonia sp. strain U2 nagAc is correlated with naphthalene concentrations in coal tar-contaminated freshwater sediments |
| Q45973414 | Active site residues controlling substrate specificity in 2-nitrotoluene dioxygenase from Acidovorax sp. strain JS42. |
| Q28754666 | Bacterial degradation of aromatic compounds |
| Q92008992 | Bacterial nanocellulose production from naphthalene |
| Q56895785 | Biodegradation of Crude Oil and Corexit 9500 in Arctic Seawater |
| Q34905240 | Biodegradation, biotransformation, and biocatalysis (b3) |
| Q35924329 | Characterization and regulation of the genes for a novel anthranilate 1,2-dioxygenase from Burkholderia cepacia DBO1 |
| Q24549124 | Cloning and sequencing of a novel meta-cleavage dioxygenase gene whose product is involved in degradation of gamma-hexachlorocyclohexane in Sphingomonas paucimobilis |
| Q33984916 | Cloning, expression, and nucleotide sequence of the Pseudomonas aeruginosa 142 ohb genes coding for oxygenolytic ortho dehalogenation of halobenzoates. |
| Q39492828 | Cloning, nucleotide sequencing, and functional analysis of a novel, mobile cluster of biodegradation genes from Pseudomonas aeruginosa strain JB2. |
| Q39649751 | Coexistence of two distinct copies of naphthalene degradation genes in Pseudomonas strains isolated from the western Mediterranean region |
| Q41962933 | Combination of degradation pathways for naphthalene utilization in Rhodococcus sp. strain TFB. |
| Q33853412 | Complete sequence of a 184-kilobase catabolic plasmid from Sphingomonas aromaticivorans F199. |
| Q40822076 | Constitutive Expression of a Nag-Like Dioxygenase Gene through an Internal Promoter in the 2-Chloronitrobenzene Catabolism Gene Cluster of Pseudomonas stutzeri ZWLR2-1 |
| Q43234789 | Control of substrate specificity by active-site residues in nitrobenzene dioxygenase |
| Q28829453 | Degradation of the Plant Defense Signal Salicylic Acid Protects Ralstonia solanacearum from Toxicity and Enhances Virulence on Tobacco |
| Q39774648 | Detection and enumeration of aromatic oxygenase genes by multiplex and real-time PCR. |
| Q35663092 | Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays |
| Q36313713 | Diversity of ndo genes in mangrove sediments exposed to different sources of polycyclic aromatic hydrocarbon pollution |
| Q33187448 | Expression of the nitroarene dioxygenase genes in Comamonas sp. strain JS765 and Acidovorax sp. strain JS42 is induced by multiple aromatic compounds |
| Q33884777 | Functional identification of novel genes involved in the glutathione-independent gentisate pathway in Corynebacterium glutamicum |
| Q33992182 | Genetic analysis of a chromosomal region containing vanA and vanB, genes required for conversion of either ferulate or vanillate to protocatechuate in Acinetobacter |
| Q35449833 | Genetic determinants involved in the biodegradation of naphthalene and phenanthrene in Pseudomonas aeruginosa PAO1. |
| Q34199476 | Heterologous expression of polycyclic aromatic hydrocarbon ring-hydroxylating dioxygenase genes from a novel pyrene-degrading betaproteobacterium |
| Q34993063 | Horizontal transfer of phnAc dioxygenase genes within one of two phenotypically and genotypically distinctive naphthalene-degrading guilds from adjacent soil environments |
| Q33984027 | In situ, real-time catabolic gene expression: extraction and characterization of naphthalene dioxygenase mRNA transcripts from groundwater. |
| Q31147312 | Insights into functional and evolutionary analysis of carbaryl metabolic pathway from Pseudomonas sp. strain C5pp. |
| Q29346531 | Involvement of the global regulator GlxR in 3-hydroxybenzoate and gentisate utilization by Corynebacterium glutamicum |
| Q92259477 | Isolation and Characterization of Genes Responsible for Naphthalene Degradation from Thermophilic Naphthalene Degrader, Geobacillus sp. JF8 |
| Q99712610 | Isolation and characterization of novel soil- and plant-associated bacteria with multiple phytohormone-degrading activities using a targeted methodology |
| Q34767096 | Isolation and characterization of thermophilic bacilli degrading cinnamic, 4-coumaric, and ferulic acids. |
| Q24548519 | Microbial relatives of the seed storage proteins of higher plants: conservation of structure and diversification of function during evolution of the cupin superfamily |
| Q35946689 | Molecular and biochemical characterization of 3-hydroxybenzoate 6-hydroxylase from Polaromonas naphthalenivorans CJ2. |
| Q24634308 | Molecular and biochemical characterization of the 5-nitroanthranilic acid degradation pathway in Bradyrhizobium sp. strain JS329 |
| Q28776689 | Molecular characterization and substrate preference of a polycyclic aromatic hydrocarbon dioxygenase from Cycloclasticus sp. strain A5 |
| Q33183334 | Molecular characterization and substrate specificity of nitrobenzene dioxygenase from Comamonas sp. strain JS765. |
| Q30692964 | Molecular cloning, nucleotide sequence, and expression of genes encoding a polycyclic aromatic ring dioxygenase from Mycobacterium sp. strain PYR-1. |
| Q36156313 | Novel L-cysteine-dependent maleylpyruvate isomerase in the gentisate pathway of Paenibacillus sp. strain NyZ101 |
| Q28767889 | Novel intermediates of acenaphthylene degradation by Rhizobium sp. strain CU-A1: evidence for naphthalene-1,8-dicarboxylic acid metabolism |
| Q33199036 | Novel pathway of salicylate degradation by Streptomyces sp. strain WA46. |
| Q34315553 | Origins of the 2,4-dinitrotoluene pathway |
| Q36143557 | Over-the-Counter Monocyclic Non-Steroidal Anti-Inflammatory Drugs in Environment-Sources, Risks, Biodegradation |
| Q37191203 | Pathway and evolutionary implications of diphenylamine biodegradation by Burkholderia sp. strain JS667 |
| Q33788440 | Protein engineering of the archetypal nitroarene dioxygenase of Ralstonia sp. strain U2 for activity on aminonitrotoluenes and dinitrotoluenes through alpha-subunit residues leucine 225, phenylalanine 350, and glycine 407. |
| Q28607238 | Pseudomonads Rule Degradation of Polyaromatic Hydrocarbons in Aerated Sediment |
| Q28776477 | Recent advances in petroleum microbiology |
| Q39678463 | Salicylate 5-hydroxylase from Ralstonia sp. strain U2: a monooxygenase with close relationships to and shared electron transport proteins with naphthalene dioxygenase |
| Q42286271 | Salt Adaptation and Evolutionary Implication of a Nah-related PAHs Dioxygenase cloned from a Halophilic Phenanthrene Degrading Consortium |
| Q34779061 | Saturation mutagenesis of Burkholderia cepacia R34 2,4-dinitrotoluene dioxygenase at DntAc valine 350 for synthesizing nitrohydroquinone, methylhydroquinone, and methoxyhydroquinone. |
| Q40387772 | The BH1999 protein of Bacillus halodurans C-125 is gentisyl-coenzyme A thioesterase |
| Q27021171 | The challenge of constructing, classifying, and representing metabolic pathways |
| Q24544059 | The naphthalene catabolic (nag) genes of Polaromonas naphthalenivorans CJ2: evolutionary implications for two gene clusters and novel regulatory control |
| Q39887833 | The naphthalene catabolic (nag) genes of Ralstonia sp. strain U2 are an operon that is regulated by NagR, a LysR-type transcriptional regulator. |
| Q39493800 | The phn genes of Burkholderia sp. strain RP007 constitute a divergent gene cluster for polycyclic aromatic hydrocarbon catabolism. |
| Q28345381 | nag genes of Ralstonia (formerly Pseudomonas) sp. strain U2 encoding enzymes for gentisate catabolism |
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