| scholarly article | Q13442814 |
| P2093 | author name string | Fukuda M | |
| Yano K | |||
| Hashimoto T | |||
| Takagi M | |||
| Oishi M | |||
| Kimbara K | |||
| Koana T | |||
| P2860 | cites work | DNA sequencing with chain-terminating inhibitors | Q22066207 |
| Detection of specific sequences among DNA fragments separated by gel electrophoresis | Q25939003 | ||
| Nucleotide sequence of the 2,3-dihydroxybiphenyl dioxygenase gene of Pseudomonas pseudoalcaligenes | Q28362145 | ||
| Production of single-stranded plasmid DNA | Q29547328 | ||
| Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid | Q29614535 | ||
| Homology between nucleotide sequences of promoter regions of nah and sal operons of NAH7 plasmid of Pseudomonas putida | Q35586292 | ||
| Transcriptional regulation, nucleotide sequence, and localization of the promoter of the catBC operon in Pseudomonas putida | Q36195473 | ||
| Cloning of genes for naphthalene metabolism in Pseudomonas putida. | Q36293266 | ||
| Cloning of genes controlling alginate biosynthesis from a mucoid cystic fibrosis isolate of Pseudomonas aeruginosa. | Q36301138 | ||
| Common induction and regulation of biphenyl, xylene/toluene, and salicylate catabolism in Pseudomonas paucimobilis | Q36330624 | ||
| Molecular and functional analysis of the TOL plasmid pWWO from Pseudomonas putida and cloning of genes for the entire regulated aromatic ring meta cleavage pathway | Q36382584 | ||
| Degradation of polychlorinated biphenyls by two species of Achromobacter | Q36525213 | ||
| Involvement of plasmids in total degradation of chlorinated biphenyls | Q36708726 | ||
| The use of transposon Tn5 mutagenesis in the rapid generation of correlated physical and genetic maps of DNA segments cloned into multicopy plasmids — a review | Q38583740 | ||
| Extensive degradation of Aroclors and environmentally transformed polychlorinated biphenyls by Alcaligenes eutrophus H850. | Q39924812 | ||
| Evidence for novel mechanisms of polychlorinated biphenyl metabolism in Alcaligenes eutrophus H850 | Q39924819 | ||
| Cloning of a gene cluster encoding biphenyl and chlorobiphenyl degradation in Pseudomonas pseudoalcaligenes | Q39965430 | ||
| Molecular cloning of gene xylS of the TOL plasmid: evidence for positive regulation of the xylDEGF operon by xylS. | Q39971204 | ||
| Molecular cloning of regulatory gene xylR and operator-promoter regions of the xylABC and xylDEGF operons of the TOL plasmid. | Q39976782 | ||
| Determination of the transcription initiation site and identification of the protein product of the regulatory gene xylR for xyl operons on the TOL plasmid | Q39981174 | ||
| Rapid assay for screening and characterizing microorganisms for the ability to degrade polychlorinated biphenyls | Q40053464 | ||
| Functional expression of cloned yeast DNA in Escherichia coli: Specific complementation of argininosuccinate lyase (argH) mutations | Q40891685 | ||
| Transcription of the TOL plasmid toluate catabolic pathway operon of Pseudomonas putida is determined by a pair of co-ordinately and positively regulated overlapping promoters | Q41582704 | ||
| Complete nucleotide sequence of the metapyrocatechase gene on the TOI plasmid of Pseudomonas putida mt-2. | Q48399500 | ||
| A general method for site-directed mutagenesis in prokaryotes | Q59069134 | ||
| P433 | issue | 5 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | polychlorinated biphenyl | Q211171 |
| soil bacterium | Q123856864 | ||
| P304 | page(s) | 2740-2747 | |
| P577 | publication date | 1989-05-01 | |
| P1433 | published in | Journal of Bacteriology | Q478419 |
| P1476 | title | Cloning and sequencing of two tandem genes involved in degradation of 2,3-dihydroxybiphenyl to benzoic acid in the polychlorinated biphenyl-degrading soil bacterium Pseudomonas sp. strain KKS102. | |
| P478 | volume | 171 |
| Q35946767 | "Mark the gene": a method for nondestructive introduction of marker sequences inside the gene frame of transgenes |
| Q89862243 | A Rotational Slurry Bioreactor Accelerates Biodegradation of A-Fuel in Oil-Contaminated Soil Even under Low Temperature Conditions |
| Q33730377 | A gene cluster encoding steps in conversion of naphthalene to gentisate in Pseudomonas sp. strain U2. |
| Q35580261 | A manganese-dependent dioxygenase from Arthrobacter globiformis CM-2 belongs to the major extradiol dioxygenase family |
| Q33666989 | A nitrilase from a metagenomic library acts regioselectively on aliphatic dinitriles. |
| Q39500228 | A novel bacterial ATP-binding cassette transporter system that allows uptake of macromolecules |
| Q38307175 | Alginate-dependent gene expression mechanism in Sphingomonas sp. strain A1 |
| Q35195841 | Analysis of cumene (isopropylbenzene) degradation genes from Pseudomonas fluorescens IP01 |
| Q90052992 | Bacterial chemotaxis towards polysaccharide pectin by pectin-binding protein |
| Q43329048 | Biodegradation of acrylamide by Enterobacter aerogenes isolated from wastewater in Thailand. |
| Q28776143 | Biodegradation of halogenated organic compounds |
| Q35855080 | Biphenyl dioxygenases: functional versatilities and directed evolution |
| Q43680010 | BphS, a key transcriptional regulator of bph genes involved in polychlorinated biphenyl/biphenyl degradation in Pseudomonas sp. KKS102. |
| Q35190577 | Catechol 2,3-dioxygenases functional in oxygen-limited (hypoxic) environments. |
| Q36123899 | Characterization of 2,2',3-trihydroxybiphenyl dioxygenase, an extradiol dioxygenase from the dibenzofuran- and dibenzo-p-dioxin-degrading bacterium Sphingomonas sp. strain RW1. |
| Q24672782 | Characterization of active recombinant 2,3-dihydro-2,3-dihydroxybiphenyl dehydrogenase from Comamonas testosteroni B-356 and sequence of the encoding gene (bphB) |
| Q39797754 | Characterization of biphenyl catabolic genes of gram-positive polychlorinated biphenyl degrader Rhodococcus sp. strain RHA1. |
| Q35622416 | Characterization of the genes encoding a receptor-like histidine kinase and a cognate response regulator from a biphenyl/polychlorobiphenyl-degrading bacterium, Rhodococcus sp. strain M5. |
| Q39482314 | Characterization of the meta-cleavage compound hydrolase gene involved in degradation of the lignin-related biphenyl structure by Sphingomonas paucimobilis SYK-6. |
| Q36840362 | Characterization of three distinct extradiol dioxygenases involved in mineralization of dibenzofuran by Terrabacter sp. strain DPO360. |
| Q37097068 | Characterization of transcriptional regulatory genes for biphenyl degradation in Rhodococcus sp. strain RHA1. |
| Q39505201 | Cloning and characterization of benzoate catabolic genes in the gram-positive polychlorinated biphenyl degrader Rhodococcus sp. strain RHA1. |
| Q24319172 | Cloning and expression analysis of a novel human serine hydrolase with sequence similarity to prokaryotic enzymes involved in the degradation of aromatic compounds |
| Q30936361 | Cloning and sequence analyses of a 2,3-dihydroxybiphenyl 1,2-dioxygenase gene ( bphC) from Comamonas sp. SMN4 for phylogenetic and structural analysis |
| Q28367558 | Cloning and sequencing of a 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase gene involved in the degradation of gamma-hexachlorocyclohexane in Pseudomonas paucimobilis |
| Q28379395 | Cloning and sequencing of a 2,5-dichlorohydroquinone reductive dehalogenase gene whose product is involved in degradation of gamma-hexachlorocyclohexane by Sphingomonas paucimobilis |
| Q28368049 | Cloning and sequencing of a dehalogenase gene encoding an enzyme with hydrolase activity involved in the degradation of gamma-hexachlorocyclohexane in Pseudomonas paucimobilis |
| Q24549124 | Cloning and sequencing of a novel meta-cleavage dioxygenase gene whose product is involved in degradation of gamma-hexachlorocyclohexane in Sphingomonas paucimobilis |
| Q24519437 | Cloning of a Sphingomonas paucimobilis SYK-6 gene encoding a novel oxygenase that cleaves lignin-related biphenyl and characterization of the enzyme |
| Q28379059 | Cloning of genes involved in carbazole degradation of Pseudomonas sp. strain CA10: nucleotide sequences of genes and characterization of meta-cleavage enzymes and hydrolase |
| Q36830513 | Cloning, sequencing, and expression of isopropylbenzene degradation genes from Pseudomonas sp. strain JR1: identification of isopropylbenzene dioxygenase that mediates trichloroethene oxidation. |
| Q42371323 | Complete genome sequence of Acidovorax sp. strain KKS102, a polychlorinated-biphenyl degrader. |
| Q35130009 | Complete nucleotide sequence of an exogenously isolated plasmid, pLB1, involved in gamma-hexachlorocyclohexane degradation. |
| Q90777810 | Composition of heterotrophic specialized sub-guilds defined by a positive RNA and polyhydroxyalkanoate correlation in activated sludge |
| Q42138422 | Conjugal transfer of polychlorinated biphenyl/biphenyl degradation genes in Acidovorax sp. strain KKS102, which are located on an integrative and conjugative element. |
| Q27660026 | Crystal Structure of the Putidaredoxin Reductase·Putidaredoxin Electron Transfer Complex |
| Q27631079 | Crystal structures of substrate free and complex forms of reactivated BphC, an extradiol type ring-cleavage dioxygenase |
| Q27639570 | Crystal structures of the reaction intermediate and its homologue of an extradiol-cleaving catecholic dioxygenase |
| Q36459668 | Crystallization and preliminary X-ray analysis of the Rieske-type [2Fe-2S] ferredoxin component of biphenyl dioxygenase from Pseudomonas sp. strain KKS102 |
| Q36585093 | Crystallization and preliminary X-ray analysis of the electron-transfer complex of Rieske-type [2Fe-2S] ferredoxin and NADH-dependent ferredoxin reductase derived from Acidovorax sp. strain KKS102. |
| Q36580630 | Crystallization and preliminary X-ray analysis of the reduced Rieske-type [2Fe-2S] ferredoxin derived from Pseudomonas sp. strain KKS102. |
| Q36294298 | Crystallization and preliminary crystallographic analysis of the catechol 2,3-dioxygenase PheB from Bacillus stearothermophilus BR219 |
| Q37096285 | Crystallographic comparison of manganese- and iron-dependent homoprotocatechuate 2,3-dioxygenases |
| Q81368177 | Current bioremediation practice and perspective |
| Q33489375 | DNA-stable isotope probing integrated with metagenomics for retrieval of biphenyl dioxygenase genes from polychlorinated biphenyl-contaminated river sediment |
| Q41763366 | Degradation of 2,3-dihydroxybenzoate by a novel meta-cleavage pathway. |
| Q39774648 | Detection and enumeration of aromatic oxygenase genes by multiplex and real-time PCR. |
| Q35961956 | Detection of polychlorinated biphenyl degradation genes in polluted sediments by direct DNA extraction and polymerase chain reaction |
| Q42248278 | Dual two-component regulatory systems are involved in aromatic compound degradation in a polychlorinated-biphenyl degrader, Rhodococcus jostii RHA1 |
| Q35975798 | Energy metabolism and alginate biosynthesis in Pseudomonas aeruginosa: role of the tricarboxylic acid cycle |
| Q34564229 | Engineered membrane superchannel improves bioremediation potential of dioxin-degrading bacteria |
| Q35614251 | Evolutionary relationships among extradiol dioxygenases |
| Q53079080 | Expression in Escherichia coli of biphenyl 2,3-dioxygenase genes from a Gram-positive polychlorinated biphenyl degrader, Rhodococcus jostii RHA1. |
| Q73131188 | Expression of the bph genes involved in biphenyl/PCB degradation in Pseudomonas sp. KKS102 induced by the biphenyl degradation intermediate, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid |
| Q35691741 | Expression, localization, and functional analysis of polychlorinated biphenyl degradation genes cbpABCD of Pseudomonas putida |
| Q54374981 | Expression, purification and functional characterization of a recombinant 2,3-dihydroxybiphenyl-1,2-dioxygenase from Rhodococcus rhodochrous |
| Q39648808 | Flow cytometry analysis of changes in the DNA content of the polychlorinated biphenyl degrader Comamonas testosteroni TK102: effect of metabolites on cell-cell separation |
| Q67914989 | Gene-specific transposon mutagenesis of the biphenyl/polychlorinated biphenyl-degradation-controlling bph operon in soil bacteria |
| Q40948763 | Genetic adaptation of bacteria to halogenated aliphatic compounds |
| Q40535939 | Genetic construction of PCB degraders |
| Q41786435 | Genetic improvement of Escherichia coli for enhanced biological removal of phosphate from wastewater |
| Q35188277 | Genetic structures of the genes encoding 2,3-dihydroxybiphenyl 1,2-dioxygenase and 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid hydrolase from biphenyl- and 4-chlorobiphenyl-degrading Pseudomonas sp. strain DJ-12. |
| Q40535901 | Genetics and biochemistry of 1,2-dichloroethane degradation |
| Q40535888 | Genetics and biochemistry of phenol degradation by Pseudomonas sp. CF600. |
| Q38607525 | Global response to desiccation stress in the soil actinomycete Rhodococcus jostii RHA1. |
| Q39881420 | Identification and analysis of polychlorinated biphenyls (PCBs)-biodegrading bacterial strains in Shanghai |
| Q35879213 | Identification and characterization of genes encoding a putative ABC-type transporter essential for utilization of gamma-hexachlorocyclohexane in Sphingobium japonicum UT26. |
| Q33758509 | Identification and characterization of genes involved in the downstream degradation pathway of gamma-hexachlorocyclohexane in Sphingomonas paucimobilis UT26. |
| Q35736989 | Identification and localization of 3-phenylcatechol dioxygenase and 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase genes of Pseudomonas putida and expression in Escherichia coli |
| Q39925494 | Identification of a catabolic transposon, Tn4371, carrying biphenyl and 4-chlorobiphenyl degradation genes in Alcaligenes eutrophus A5. |
| Q35192654 | Identification of an alternative 2,3-dihydroxybiphenyl 1,2-dioxygenase in Rhodococcus sp. strain RHA1 and cloning of the gene |
| Q39931025 | Identification of the bphA4 gene encoding ferredoxin reductase involved in biphenyl and polychlorinated biphenyl degradation in Pseudomonas sp. strain KKS102 |
| Q33984027 | In situ, real-time catabolic gene expression: extraction and characterization of naphthalene dioxygenase mRNA transcripts from groundwater. |
| Q43026798 | Isolation and characterization of a thermophilic Bacillus sp. JF8 capable of degrading polychlorinated biphenyls and naphthalene |
| Q39479468 | Isolation of marine polycyclic aromatic hydrocarbon (PAH)-degrading Cycloclasticus strains from the Gulf of Mexico and comparison of their PAH degradation ability with that of puget sound Cycloclasticus strains |
| Q35540708 | Isolation of oxygenase genes for indigo-forming activity from an artificially polluted soil metagenome by functional screening using Pseudomonas putida strains as hosts. |
| Q34447424 | Lipases and alpha/beta hydrolase fold |
| Q35586827 | Molecular and biochemical characterization of two meta-cleavage dioxygenases involved in biphenyl and m-xylene degradation by Beijerinckia sp. strain B1. |
| Q111347534 | Molecular cloning and characterization of biphenyl hydrolase-like (BPHL) protein gene from silkworm, Bombyx mori |
| Q33267629 | Molecular cloning of a Pseudomonas paucimobilis gene encoding a 17-kilodalton polypeptide that eliminates HCl molecules from gamma-hexachlorocyclohexane |
| Q40535913 | Molecular genetics and evolutionary relationship of PCB-degrading bacteria |
| Q38310191 | Molecular identification of oligoalginate lyase of Sphingomonas sp. strain A1 as one of the enzymes required for complete depolymerization of alginate |
| Q36683268 | Multiple genes encoding 2,3-dihydroxybiphenyl 1,2-dioxygenase in the gram-positive polychlorinated biphenyl-degrading bacterium Rhodococcus erythropolis TA421, isolated from a termite ecosystem |
| Q42064111 | Multiple-subunit genes of the aromatic-ring-hydroxylating dioxygenase play an active role in biphenyl and polychlorinated biphenyl degradation in Rhodococcus sp. strain RHA1. |
| Q35108662 | New hydrocarbon degradation pathways in the microbial metagenome from Brazilian petroleum reservoirs |
| Q69729186 | New nucleotide sequence data on the EMBL File Server |
| Q39743264 | Novel approach to the improvement of biphenyl and polychlorinated biphenyl degradation activity: promoter implantation by homologous recombination |
| Q39932667 | Nucleotide sequence and functional analysis of the meta-cleavage pathway involved in biphenyl and polychlorinated biphenyl degradation in Pseudomonas sp. strain KKS102 |
| Q40517338 | Nucleotide sequence of metapyrocatechase I (catechol 2,3-oxygenase I) gene mpcI from Alcaligenes eutrophus JMP222. |
| Q51336961 | Nucleotide sequences and characterization of genes encoding naphthalene upper pathway of pseudomonas aeruginosa PaK1 and Pseudomonas putida OUS82. |
| Q39836869 | Nucleotide sequences and expression of genes from Streptomyces purpurascens that cause the production of new anthracyclines in Streptomyces galilaeus |
| Q39488955 | Occurrence of Tn4371-related mobile elements and sequences in (chloro)biphenyl-degrading bacteria |
| Q42119731 | Proteomic analysis of survival of Rhodococcus jostii RHA1 during carbon starvation |
| Q36158725 | Pseudomonas putida KF715 bphABCD operon encoding biphenyl and polychlorinated biphenyl degradation: cloning, analysis, and expression in soil bacteria |
| Q24676866 | Purification and characterization of a 1,2-dihydroxynaphthalene dioxygenase from a bacterium that degrades naphthalenesulfonic acids |
| Q34185393 | Purification and properties of 2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2,4-dienoic acid hydrolase involved in microbial degradation of carbazole. |
| Q35190808 | Purification of 2,3-dihydroxybiphenyl 1,2-dioxygenase from Pseudomonas putida OU83 and characterization of the gene (bphC). |
| Q39639633 | Rapid assessment of the physiological status of the polychlorinated biphenyl degrader Comamonas testosteroni TK102 by flow cytometry |
| Q36052131 | Recombination of the bph (Biphenyl) Catabolic Genes from Plasmid pWW100 and Their Deletion during Growth on Benzoate |
| Q39483076 | Regiospecificity of dioxygenation of di- to pentachlorobiphenyls and their degradation to chlorobenzoates by the bph-encoded catabolic pathway of Burkholderia sp. strain LB400. |
| Q41953342 | Structure-based conversion of the coenzyme requirement of a short-chain dehydrogenase/reductase involved in bacterial alginate metabolism |
| Q30816609 | The biphenyl- and 4-chlorobiphenyl-catabolic transposon Tn4371, a member of a new family of genomic islands related to IncP and Ti plasmids. |
| Q48052684 | The bphDEF meta-cleavage pathway genes involved in biphenyl/polychlorinated biphenyl degradation are located on a linear plasmid and separated from the initial bphACB genes in Rhodococcus sp. strain RHA1. |
| Q40535883 | The evolution of pathways for aromatic hydrocarbon oxidation in Pseudomonas. |
| Q42156464 | Tolerance of the Rieske-type [2Fe-2S] cluster in recombinant ferredoxin BphA3 from Pseudomonas sp. KKS102 to histidine ligand mutations. |
| Q40535933 | Transfer and expression of PCB-degradative genes into heavy metal resistant Alcaligenes eutrophus strains |
| Q33708717 | Two nearly identical aromatic compound hydrolase genes in a strong polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1. |
| Q38310463 | Versatile transcription of biphenyl catabolic bph operon in Pseudomonas pseudoalcaligenes KF707. |
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