Characterization of transcriptional regulatory genes for biphenyl degradation in Rhodococcus sp. strain RHA1.

scientific article published on April 2004

Characterization of transcriptional regulatory genes for biphenyl degradation in Rhodococcus sp. strain RHA1. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/JB.186.7.2134-2146.2004
P932PMC publication ID374424
P698PubMed publication ID15028699
P5875ResearchGate publication ID8672007

P50authorEiji MasaiQ42634099
Masao FukudaQ48040863
P2093author name stringKeisuke Miyauchi
Akihiro Yamada
Hisashi Takeda
P2860cites workProtein phosphorylation and regulation of adaptive responses in bacteriaQ24634755
Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classificationQ28131753
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Two nearly identical aromatic compound hydrolase genes in a strong polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1.Q33708717
Genetic and functional analysis of the styrene catabolic cluster of Pseudomonas sp. strain Y2.Q33725076
The histidine protein kinase superfamily.Q33740391
Benzylsuccinate synthase of Azoarcus sp. strain T: cloning, sequencing, transcriptional organization, and its role in anaerobic toluene and m-xylene mineralizationQ33997078
A Novel Transformation of Polychlorinated Biphenyls by Rhodococcus sp. Strain RHA1.Q34422950
Cloning and expression in Escherichia coli of Pseudomonas strain LB400 genes encoding polychlorinated biphenyl degradationQ35189154
Identification of an alternative 2,3-dihydroxybiphenyl 1,2-dioxygenase in Rhodococcus sp. strain RHA1 and cloning of the geneQ35192654
Cloning and sequencing of two tandem genes involved in degradation of 2,3-dihydroxybiphenyl to benzoic acid in the polychlorinated biphenyl-degrading soil bacterium Pseudomonas sp. strain KKS102.Q35424732
Characterization of the genes encoding a receptor-like histidine kinase and a cognate response regulator from a biphenyl/polychlorobiphenyl-degrading bacterium, Rhodococcus sp. strain M5.Q35622416
A bacterial basic region leucine zipper histidine kinase regulating toluene degradationQ35997638
Involvement of plasmids in total degradation of chlorinated biphenylsQ36708726
Identification and sequence analysis of two regulatory genes involved in anaerobic toluene metabolism by strain T1.Q36845469
Versatile transcription of biphenyl catabolic bph operon in Pseudomonas pseudoalcaligenes KF707.Q38310463
A GntR-like negative regulator of the biphenyl degradation genes of the transposon Tn4371.Q38316702
Characterization of the 450-kb linear plasmid in a polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1.Q39490708
Cross-regulation between a novel two-component signal transduction system for catabolism of toluene in Pseudomonas mendocina and the TodST system from Pseudomonas putidaQ39680909
2-Hydroxypenta-2,4-dienoate metabolic pathway genes in a strong polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1.Q39743171
Characterization of biphenyl catabolic genes of gram-positive polychlorinated biphenyl degrader Rhodococcus sp. strain RHA1.Q39797754
Cloning and nucleotide sequence of the gene encoding the positive regulator (DmpR) of the phenol catabolic pathway encoded by pVI150 and identification of DmpR as a member of the NtrC family of transcriptional activatorsQ39925462
Nucleotide sequence and functional analysis of the meta-cleavage pathway involved in biphenyl and polychlorinated biphenyl degradation in Pseudomonas sp. strain KKS102Q39932667
Development of a host-vector system in a Rhodococcus strain and its use for expression of the cloned nitrile hydratase gene clusterQ41838541
Multiple Polychlorinated Biphenyl Transformation Systems in the Gram-Positive Bacterium Rhodococcus sp. Strain RHA1.Q42124805
Toluene metabolism by the solvent-tolerant Pseudomonas putida DOT-T1 strain, and its role in solvent impermeabilization.Q42601984
Cloning and expression of genes involved in 4-chlorobiphenyl transformation by Pseudomonas testosteroni: homology to polychlorobiphenyl-degrading genes in other bacteriaQ43464106
BphS, a key transcriptional regulator of bph genes involved in polychlorinated biphenyl/biphenyl degradation in Pseudomonas sp. KKS102.Q43680010
Multiplicity of aromatic ring hydroxylation dioxygenase genes in a strong PCB degrader, Rhodococcus sp. strain RHA1 demonstrated by denaturing gradient gel electrophoresis.Q43751325
Styrene-catabolism regulation in Pseudomonas fluorescens ST: phosphorylation of StyR induces dimerization and cooperative DNA-bindingQ44386985
Diversity of 2,3-dihydroxybiphenyl dioxygenase genes in a strong PCB degrader, Rhodococcus sp. strain RHA1.Q46759749
Structural analysis of the 6 kb cryptic plasmid pFAJ2600 from Rhodococcus erythropolis NI86/21 and construction of Escherichia coli-Rhodococcus shuttle vectorsQ48043153
The bphDEF meta-cleavage pathway genes involved in biphenyl/polychlorinated biphenyl degradation are located on a linear plasmid and separated from the initial bphACB genes in Rhodococcus sp. strain RHA1.Q48052684
The biphenyl/polychlorinated biphenyl-degradation locus (bph) of Pseudomonas sp. LB400 encodes four additional metabolic enzymesQ48081618
The use of the luxA gene of the bacterial luciferase operon as a reporter gene.Q54738299
Analysis of transcription of the bph locus of Burkholderia sp. strain LB400 and evidence that the ORF0 gene product acts as a regulator of the bphA1 promoterQ74339113
A two-component system involved in regulation of anaerobic toluene metabolism in Thauera aromaticaQ77311642
P433issue7
P407language of work or nameEnglishQ1860
P304page(s)2134-2146
P577publication date2004-04-01
P1433published inJournal of BacteriologyQ478419
P1476titleCharacterization of transcriptional regulatory genes for biphenyl degradation in Rhodococcus sp. strain RHA1
P478volume186

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cites work (P2860)
Q36531240Biodegradation by members of the genus Rhodococcus: biochemistry, physiology, and genetic adaptation
Q46990323Biphenyl and ethylbenzene dioxygenases of Rhodococcus jostii RHA1 transform PBDEs
Q35855080Biphenyl dioxygenases: functional versatilities and directed evolution
Q46146901Catabolic plasmid specifying polychlorinated biphenyl degradation in Cupriavidus sp. strain SK-4: mobilization and expression in a pseudomonad
Q33855547Catabolism of benzoate and phthalate in Rhodococcus sp. strain RHA1: redundancies and convergence
Q41978527Characterization of the isophthalate degradation genes of Comamonas sp. strain E6.
Q64102321Comparative Genomic Analysis of the Regulation of Aromatic Metabolism in Betaproteobacteria
Q46470017Construction, properties, and application of the pCB5 plasmid, a novel conjugative shuttle vector with a Cupriavidus basilensis origin of replication.
Q42248278Dual two-component regulatory systems are involved in aromatic compound degradation in a polychlorinated-biphenyl degrader, Rhodococcus jostii RHA1
Q53079080Expression in Escherichia coli of biphenyl 2,3-dioxygenase genes from a Gram-positive polychlorinated biphenyl degrader, Rhodococcus jostii RHA1.
Q40038819Identification of novel extracellular protein for PCB/biphenyl metabolism in Rhodococcus jostii RHA1.
Q41859187Molecular and biochemical characterization of the tetralin degradation pathway in Rhodococcus sp. strain TFB
Q42064111Multiple-subunit genes of the aromatic-ring-hydroxylating dioxygenase play an active role in biphenyl and polychlorinated biphenyl degradation in Rhodococcus sp. strain RHA1.
Q41773394Roles of ring-hydroxylating dioxygenases in styrene and benzene catabolism in Rhodococcus jostii RHA1.
Q37033442The GAF-like-domain-containing transcriptional regulator DfdR is a sensor protein for dibenzofuran and several hydrophobic aromatic compounds
Q42076404Transcriptomic analysis reveals a bifurcated terephthalate degradation pathway in Rhodococcus sp. strain RHA1.
Q42057117Transcriptomic assessment of isozymes in the biphenyl pathway of Rhodococcus sp. strain RHA1

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