Identification in vivo of different rate-limiting steps associated with transcriptional activators in the presence and absence of a GAGA element

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Identification in vivo of different rate-limiting steps associated with transcriptional activators in the presence and absence of a GAGA element is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/MCB.25.9.3543-3552.2005
P932PMC publication ID1084279
P698PubMed publication ID15831460

P2093author name stringDavid S Gilmour
Hongbing Tang
Yunyuan Vivian Wang
P2860cites workThree transitions in the RNA polymerase II transcription complex during initiationQ24532893
Tight control of gene expression in mammalian cells by tetracycline-responsive promotersQ24564850
Exploring the sequence space for tetracycline-dependent transcriptional activators: novel mutations yield expanded range and sensitivityQ24676926
Molecular characterization of Drosophila NELFQ24798796
Promoter-associated pausing in promoter architecture and postinitiation transcriptional regulationQ28138307
FACT relieves DSIF/NELF-mediated inhibition of transcriptional elongation and reveals functional differences between P-TEFb and TFIIHQ28141838
Molecular cloning and expression of a hexameric Drosophila heat shock factor subject to negative regulationQ28266377
Translocation after synthesis of a four-nucleotide RNA commits RNA polymerase II to promoter escapeQ28646693
Polymerase II promoter activation: closed complex formation and ATP-driven start site openingQ28646720
Promoter escape by RNA polymerase IIQ29030884
Promoter-proximal pausing on the hsp70 promoter in Drosophila melanogaster depends on the upstream regulatorQ33962719
The C-terminal region of Drosophila heat shock factor (HSF) contains a constitutively functional transactivation domainQ34588152
Dynamics of potentiation and activation: GAGA factor and its role in heat shock gene regulationQ34639083
ATP-dependent nucleosome disruption at a heat-shock promoter mediated by binding of GAGA transcription factor.Q34727012
Genomewide analysis of Drosophila GAGA factor target genes reveals context-dependent DNA bindingQ34807363
NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in DrosophilaQ35965503
In vivo transcriptional pausing and cap formation on three Drosophila heat shock genesQ36499506
Dynamic protein-DNA architecture of a yeast heat shock promoterQ36551052
(CT)n (GA)n repeats and heat shock elements have distinct roles in chromatin structure and transcriptional activation of the Drosophila hsp26 geneQ36681709
RNA polymerase II pauses at the 5' end of the transcriptionally induced Drosophila hsp70 geneQ36738468
HSF access to heat shock elements in vivo depends critically on promoter architecture defined by GAGA factor, TFIID, and RNA polymerase II binding sitesQ38289211
Promoter melting and TFIID complexes on Drosophila genes in vivoQ38324780
GAGA factor and the TFIID complex collaborate in generating an open chromatin structure at the Drosophila melanogaster hsp26 promoterQ39675363
Mechanism of rapid transcriptional induction of tumor necrosis factor alpha-responsive genes by NF-kappaB.Q39681517
Tetracycline-controlled transcription in eukaryotes: novel transactivators with graded transactivation potentialQ39720663
Analyses of promoter-proximal pausing by RNA polymerase II on the hsp70 heat shock gene promoter in a Drosophila nuclear extractQ40019946
Molecular architecture of the hsp70 promoter after deletion of the TATA box or the upstream regulation regionQ40022625
Elongation and premature termination of transcripts initiated from c-fos and c-myc promoters show dissimilar patternsQ41379713
KMnO4 as a probe for lac promoter DNA melting and mechanism in vivoQ41790921
Co-operative DNA binding by GAGA transcription factor requires the conserved BTB/POZ domain and reorganizes promoter topologyQ41960652
Promoter sequence containing (CT)n.(GA)n repeats is critical for the formation of the DNase I hypersensitive sites in the Drosophila hsp26 geneQ41979565
Mediator, not holoenzyme, is directly recruited to the heat shock promoter by HSF upon heat shockQ42508865
Regulation of c-fos expression by RNA polymerase elongation competenceQ42828009
Drosophila nuclear proteins bind to regions of alternating C and T residues in gene promotersQ43556275
Mapping the location of TFIIB within the RNA polymerase II transcription preinitiation complex: a model for the structure of the PIC.Q45103213
Abortive initiation by RNA polymerase II in vitro at the adenovirus 2 major late promoterQ45345542
Dual functions of largest NURF subunit NURF301 in nucleosome sliding and transcription factor interactionsQ47070476
Polycomb silencing blocks transcription initiation.Q47850992
The block to transcriptional elongation within the human c-myc gene is determined in the promoter-proximal regionQ49162171
DNA sequence requirements for generating paused polymerase at the start of hsp70Q52445465
Vectors for Drosophila P-element-mediated transformation and tissue culture transfection.Q52461005
Cooperative and competitive protein interactions at the hsp70 promoter.Q52528488
Distribution of GAGA protein on Drosophila genes in vivo.Q52538983
Purification and properties of an ATP-dependent nucleosome remodeling factor.Q52546410
Studies of in vitro transcription by calf thymus RNA polymerase II using a novel duplex DNA templateQ70312271
P433issue9
P407language of work or nameEnglishQ1860
P304page(s)3543-3552
P577publication date2005-05-01
P1433published inMolecular and Cellular BiologyQ3319478
P1476titleIdentification in vivo of different rate-limiting steps associated with transcriptional activators in the presence and absence of a GAGA element
P478volume25

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cites work (P2860)
Q35564591Activity of heat shock genes' promoters in thermally contrasting animal species
Q34038245Control of transcriptional elongation
Q37952115Controlling gene expression in response to stress.
Q33963951Corepressor-directed preacetylation of histone H3 in promoter chromatin primes rapid transcriptional switching of cell-type-specific genes in yeast
Q33708432Defining mechanisms that regulate RNA polymerase II transcription in vivo
Q51776964Detecting transcriptionally engaged RNA polymerase in eukaryotic cells with permanganate genomic footprinting.
Q37666209Developmental gene regulation in the era of genomics
Q37075889Enforcing the pause: transcription factor Sp3 limits productive elongation by RNA polymerase II.
Q35588343GAGA factor maintains nucleosome-free regions and has a role in RNA polymerase II recruitment to promoters
Q36997701Imaging Drosophila gene activation and polymerase pausing in vivo
Q37737546Inducible gene expression: diverse regulatory mechanisms
Q36710845NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila
Q36676820Promoter elements associated with RNA Pol II stalling in the Drosophila embryo
Q37284766Promoter proximal pausing on genes in metazoans
Q39442921Transcription regulation through promoter-proximal pausing of RNA polymerase II.

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