| scholarly article | Q13442814 |
| P50 | author | Christina A Cuomo | Q30502916 |
| P2093 | author name string | Diego A Martinez | |
| Qiandong Zeng | |||
| Zehua Chen | |||
| Zheng Wang | |||
| Sharvari Gujja | |||
| Paul J Szaniszlo | |||
| Sean M Sykes | |||
| P2860 | cites work | Production of melanin by Aspergillus fumigatus | Q43849175 |
| Relapsing Exophiala jeanselmei phaeohyphomycosis in a lung-transplant patient | Q43885858 | ||
| High diversity of polyketide synthase genes and the melanin biosynthesis gene cluster in Penicillium marneffei. | Q44666317 | ||
| VelB/VeA/LaeA complex coordinates light signal with fungal development and secondary metabolism | Q46537897 | ||
| Bioinformatic and expression analysis of the putative gliotoxin biosynthetic gene cluster of Aspergillus fumigatus | Q46567962 | ||
| Characterization of a gene in the car cluster of Fusarium fujikuroi that codes for a protein of the carotenoid oxygenase family | Q46622984 | ||
| Phylogenetic and biochemical characterization of a novel cluster of intracellular fungal alpha-amylase enzymes. | Q46874282 | ||
| DAGchainer: a tool for mining segmental genome duplications and synteny | Q47215965 | ||
| Studies on a saprophyte of Exophiala dermatitidis isolated from a humidifier | Q48965319 | ||
| Comprehensive genomic analysis of cell wall genes in Aspergillus nidulans | Q62640388 | ||
| Importance of calcium to the regulation of polymorphism in Wangiella (Exophiala) dermatitidis | Q74187478 | ||
| Analysis of subgroup C of fungal chitinases containing chitin-binding and LysM modules in the mycoparasite Trichoderma atroviride | Q85034830 | ||
| Ionizing radiation changes the electronic properties of melanin and enhances the growth of melanized fungi | Q21090114 | ||
| Adaptation of the black yeast Wangiella dermatitidis to ionizing radiation: molecular and cellular mechanisms | Q21133910 | ||
| LTR retrotransposons in fungi | Q21134922 | ||
| Ultrafast and memory-efficient alignment of short DNA sequences to the human genome | Q21183894 | ||
| Comparative genomic analysis of human fungal pathogens causing paracoccidioidomycosis | Q21563376 | ||
| Reconstructing the early evolution of Fungi using a six-gene phylogeny | Q21972837 | ||
| Comparative Genome Analysis of Trichophyton rubrum and Related Dermatophytes Reveals Candidate Genes Involved in Infection | Q22065436 | ||
| The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex | Q22065724 | ||
| Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives | Q22065777 | ||
| Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles | Q24536351 | ||
| IntEnz, the integrated relational enzyme database | Q24599172 | ||
| MUSCLE: multiple sequence alignment with high accuracy and high throughput | Q24613456 | ||
| Full-length transcriptome assembly from RNA-Seq data without a reference genome | Q24620766 | ||
| Biosynthesis of UDP-GlcNAc(3NAc)A by WbpB, WbpE, and WbpD: enzymes in the Wbp pathway responsible for O-antigen assembly in Pseudomonas aeruginosa PAO1 | Q24648470 | ||
| The Transporter Classification Database: recent advances | Q24655401 | ||
| Statistical significance for genomewide studies | Q24681264 | ||
| Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments | Q27486121 | ||
| RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models | Q27860746 | ||
| edgeR: a Bioconductor package for differential expression analysis of digital gene expression data | Q27860819 | ||
| Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes | Q27860838 | ||
| OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes | Q27860860 | ||
| MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods | Q27860929 | ||
| Dissecting and manipulating the pathway for glycosylphos-phatidylinositol-anchor biosynthesis | Q27938016 | ||
| Surface hydrophobin prevents immune recognition of airborne fungal spores | Q28256741 | ||
| Enzymes of UDP-GlcNAc biosynthesis in yeast | Q28291422 | ||
| Insights into fungal pathogenesis from the iatrogenic epidemic of Exserohilum rostratum fungal meningitis | Q28298036 | ||
| Biochemical characterization of WbpA, a UDP-N-acetyl-D-glucosamine 6-dehydrogenase involved in O-antigen biosynthesis in Pseudomonas aeruginosa PAO1 | Q28492510 | ||
| Approaches to Fungal Genome Annotation | Q28743183 | ||
| A glimpse into the basis of vision in the kingdom Mycota | Q28748994 | ||
| The evolution of sex: a perspective from the fungal kingdom | Q28751643 | ||
| SignalP 4.0: discriminating signal peptides from transmembrane regions | Q29547202 | ||
| InterProScan--an integration platform for the signature-recognition methods in InterPro | Q29547336 | ||
| RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome | Q29547458 | ||
| Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research | Q29547461 | ||
| High-quality draft assemblies of mammalian genomes from massively parallel sequence data | Q29615830 | ||
| De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis | Q29615950 | ||
| De novo identification of repeat families in large genomes | Q29617348 | ||
| Aspergillus nidulans HOG pathway is activated only by two-component signalling pathway in response to osmotic stress | Q30160244 | ||
| Cytolocalization of the class V chitin synthase in the yeast, hyphal and sclerotic morphotypes of Wangiella (Exophiala) dermatitidis | Q30373183 | ||
| Molecular cloning and characterization of WdPKS1, a gene involved in dihydroxynaphthalene melanin biosynthesis and virulence in Wangiella (Exophiala) dermatitidis | Q30652807 | ||
| Effects of disrupting the polyketide synthase gene WdPKS1 in Wangiella [Exophiala] dermatitidis on melanin production and resistance to killing by antifungal compounds, enzymatic degradation, and extremes in temperature | Q33247219 | ||
| A developmentally regulated gene cluster involved in conidial pigment biosynthesis in Aspergillus fumigatus. | Q33638317 | ||
| Comprehensive comparative analysis of strand-specific RNA sequencing methods | Q33658471 | ||
| U.S. case report of cerebral phaeohyphomycosis caused by Ramichloridium obovoideum (R. mackenziei): criteria for identification, therapy, and review of other known dematiaceous neurotropic taxa | Q33659270 | ||
| Expression of a constitutively active Cdc42 homologue promotes development of sclerotic bodies but represses hyphal growth in the zoopathogenic fungus Wangiella (Exophiala) dermatitidis | Q33791573 | ||
| Cell wall integrity signaling in Saccharomyces cerevisiae | Q33939988 | ||
| Acute cerebral phaeohyphomycosis due to Wangiella dermatitidis accompanied by cerebrospinal fluid eosinophilia. | Q33967001 | ||
| Pathogenic roles for fungal melanins | Q34056367 | ||
| Pyomelanin formation in Aspergillus fumigatus requires HmgX and the transcriptional activator HmgR but is dispensable for virulence | Q34064545 | ||
| High prevalence of the neurotrope Exophiala dermatitidis and related oligotrophic black yeasts in sauna facilities | Q34158124 | ||
| Molecular genetic studies of the model dematiaceous pathogen Wangiella dermatitidis | Q34160923 | ||
| Exophiala infection from contaminated injectable steroids prepared by a compounding pharmacy--United States, July-November 2002. | Q34170876 | ||
| Dishwashers--a man-made ecological niche accommodating human opportunistic fungal pathogens. | Q34219127 | ||
| A normalization strategy for comparing tag count data | Q34219998 | ||
| Microsporidian genome analysis reveals evolutionary strategies for obligate intracellular growth. | Q34289122 | ||
| Surface α-1,3-glucan facilitates fungal stealth infection by interfering with innate immunity in plants. | Q34395277 | ||
| Seeing the rainbow: light sensing in fungi | Q34577011 | ||
| Towards defining the chloroviruses: a genomic journey through a genus of large DNA viruses. | Q34623351 | ||
| Spectrum of clinically relevant Exophiala species in the United States | Q34642468 | ||
| WdChs1p, a class II chitin synthase, is more responsible than WdChs2p (Class I) for normal yeast reproductive growth in the polymorphic, pathogenic fungus Wangiella (Exophiala) dermatitidis | Q34696222 | ||
| The presence of peptidoglycan O-acetyltransferase in various staphylococcal species correlates with lysozyme resistance and pathogenicity | Q34975810 | ||
| Biosynthesis of fungal melanins and their importance for human pathogenic fungi | Q35079260 | ||
| The contribution of melanin to microbial pathogenesis | Q35098810 | ||
| Protein Glycosylation in Aspergillus fumigatus Is Essential for Cell Wall Synthesis and Serves as a Promising Model of Multicellular Eukaryotic Development | Q35250951 | ||
| The Aspergillus niger multicopper oxidase family: analysis and overexpression of laccase-like encoding genes | Q35431747 | ||
| Phaeohyphomycosis of the central nervous system in immunocompetent hosts: report of a case and review of the literature | Q35600599 | ||
| Histoplasma capsulatum alpha-(1,3)-glucan blocks innate immune recognition by the beta-glucan receptor. | Q35611609 | ||
| Elevated cell wall chitin in Candida albicans confers echinocandin resistance in vivo | Q35666505 | ||
| Iron - A Key Nexus in the Virulence of Aspergillus fumigatus | Q35738573 | ||
| Gliotoxin is a virulence factor of Aspergillus fumigatus: gliP deletion attenuates virulence in mice immunosuppressed with hydrocortisone | Q36095263 | ||
| WdStuAp, an APSES transcription factor, is a regulator of yeast-hyphal transitions in Wangiella (Exophiala) dermatitidis | Q36095268 | ||
| Stimulation of beta(1----3)glucan synthetase of various fungi by nucleoside triphosphates: generalized regulatory mechanism for cell wall biosynthesis | Q36292591 | ||
| Molecular cloning and characterization of WdTUP1, a gene that encodes a potential transcriptional repressor important for yeast-hyphal transitions in Wangiella (Exophiala) dermatitidis | Q36661420 | ||
| Gene cluster involved in melanin biosynthesis of the filamentous fungus Alternaria alternata | Q36771790 | ||
| Vi antigen biosynthesis in Salmonella typhi: characterization of UDP-N-acetylglucosamine C-6 dehydrogenase (TviB) and UDP-N-acetylglucosaminuronic acid C-4 epimerase (TviC) | Q36835447 | ||
| New biosynthetic step in the melanin pathway of Wangiella (Exophiala) dermatitidis: evidence for 2-acetyl-1,3,6,8-Tetrahydroxynaphthalene as a novel precursor | Q36939039 | ||
| Yeast osmoregulation | Q36944160 | ||
| Using a meiosis detection toolkit to investigate ancient asexual "scandals" and the evolution of sex. | Q37163188 | ||
| Transcriptome analysis by strand-specific sequencing of complementary DNA. | Q37393534 | ||
| Comparative genomics of MAP kinase and calcium-calcineurin signalling components in plant and human pathogenic fungi. | Q37537816 | ||
| Transcriptional profiling in Candida albicans reveals new adaptive responses to extracellular pH and functions for Rim101p | Q38334065 | ||
| Conserved fungal LysM effector Ecp6 prevents chitin-triggered immunity in plants. | Q38341524 | ||
| Induction and Ultrastructure of the Multicellular (Sclerotic) Morphology inPhialophora Dermatitidis | Q39100235 | ||
| Effect of melanin and carotenoids of Exophiala (Wangiella) dermatitidis on phagocytosis, oxidative burst, and killing by human neutrophils | Q39509139 | ||
| Developments in hyalohyphomycosis and phaeohyphomycosis. | Q40509567 | ||
| Cell cycle regulation of polymorphism in Wangiella dermatitidis. | Q40809510 | ||
| Putative cell wall integrity sensor proteins in Aspergillus nidulans | Q41847473 | ||
| SMURF: Genomic mapping of fungal secondary metabolite clusters | Q42573739 | ||
| Systemic analysis of the response of Aspergillus niger to ambient pH. | Q42641598 | ||
| The complete DNA sequence of the Ectocarpus siliculosus Virus EsV-1 genome | Q42656902 | ||
| Recognition and blocking of innate immunity cells by Candida albicans chitin | Q42727068 | ||
| Production of pyomelanin, a second type of melanin, via the tyrosine degradation pathway in Aspergillus fumigatus | Q43203971 | ||
| Characterization of glucuronic acid containing glycolipid in Aspergillus fumigatus mycelium | Q43285470 | ||
| Multistate fungal meningitis outbreak -- interim guidance for treatment. | Q43663471 | ||
| P4510 | describes a project that uses | edgeR | Q113334690 |
| P433 | issue | 4 | |
| P921 | main subject | transcriptome | Q252857 |
| phaeohyphomycosis | Q2089599 | ||
| RNA sequencing | Q2542347 | ||
| P304 | page(s) | 561-578 | |
| P577 | publication date | 2014-04-16 | |
| P1433 | published in | G3 | Q5512701 |
| P1476 | title | Comparative genomic and transcriptomic analysis of wangiella dermatitidis, a major cause of phaeohyphomycosis and a model black yeast human pathogen | |
| P478 | volume | 4 |
| Q64072277 | Central line associated blood stream infection (CLABSI) due to in an adult patient: Case report and review |
| Q43628272 | Comparative Genomics of Sibling Species of Fonsecaea Associated with Human Chromoblastomycosis |
| Q37712160 | Exploring the genomic diversity of black yeasts and relatives (Chaetothyriales, Ascomycota). |
| Q35659942 | From Glacier to Sauna: RNA-Seq of the Human Pathogen Black Fungus Exophiala dermatitidis under Varying Temperature Conditions Exhibits Common and Novel Fungal Response |
| Q28593393 | Genome-wide analyses of chitin synthases identify horizontal gene transfers towards bacteria and allow a robust and unifying classification into fungi |
| Q36115696 | Genomic Analyses of Cladophialophora bantiana, a Major Cause of Cerebral Phaeohyphomycosis Provides Insight into Its Lifestyle, Virulence and Adaption in Host |
| Q47869100 | Genomic Understanding of an Infectious Brain Disease from the Desert. |
| Q118162996 | Genomic analysis of ant domatia-associated melanized fungi (Chaetothyriales, Ascomycota) |
| Q41202273 | Genomic and transcriptomic analysis of the toluene degrading black yeast Cladophialophora immunda. |
| Q56993529 | Identification of Antifungal Targets Based on Computer Modeling |
| Q127599255 | Novel black yeast-like species in chaetothyriales with ant-associated life styles |
| Q36276953 | Phylogenomic analyses reveal the diversity of laccase-coding genes in Fonsecaea genomes |
| Q99552292 | Protocol for Genome-Scale Reconstruction and Melanogenesis Analysis of Exophiala dermatitidis |
| Q61818068 | Stress-Tolerant Yeasts: Opportunistic Pathogenicity Versus Biocontrol Potential |
| Q39206508 | The Transcriptome of Exophiala dermatitidis during Ex-vivo Skin Model Infection |
| Q36098401 | The role of melanin pathways in extremotolerance and virulence of Fonsecaea revealed by de novo assembly transcriptomics using illumina paired-end sequencing. |
| Q57091822 | Transcriptome Study of an Mutant on an Skin Model: Is Melanin Important for Infection? |
Search more.