| scholarly article | Q13442814 |
| P2093 | author name string | R Jansen | |
| B A van Der Zeijst | |||
| J D van Embden | |||
| K Kremer | |||
| L M Schouls | |||
| T van Gorkom | |||
| P2860 | cites work | Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii | Q22065564 |
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| Mycobacterium canettii, the smooth variant of M. tuberculosis, isolated from a Swiss patient exposed in Africa | Q22241248 | ||
| A novel pathogenic taxon of the Mycobacterium tuberculosis complex, Canetti: characterization of an exceptional isolate from Africa | Q22242666 | ||
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| Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics | Q24676592 | ||
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| Restricted structural gene polymorphism in the Mycobacterium tuberculosis complex indicates evolutionarily recent global dissemination | Q29618475 | ||
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| IS6110 transposition and evolutionary scenario of the direct repeat locus in a group of closely related Mycobacterium tuberculosis strains. | Q33728806 | ||
| Rapid molecular genetic subtyping of serotype M1 group A Streptococcus strains | Q33860191 | ||
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| Long stretches of short tandem repeats are present in the largest replicons of the Archaea Haloferax mediterranei and Haloferax volcanii and could be involved in replicon partitioning | Q34057597 | ||
| Evaluation of four DNA typing techniques in epidemiological investigations of bovine tuberculosis | Q34073070 | ||
| Comparison of various repetitive DNA elements as genetic markers for strain differentiation and epidemiology of Mycobacterium tuberculosis | Q34306682 | ||
| Nature of DNA polymorphism in the direct repeat cluster of Mycobacterium tuberculosis; application for strain differentiation by a novel typing method | Q34323913 | ||
| Genetic diversity in the Mycobacterium tuberculosis complex based on variable numbers of tandem DNA repeats | Q34470358 | ||
| Insertion element IS987 from Mycobacterium bovis BCG is located in a hot-spot integration region for insertion elements in Mycobacterium tuberculosis complex strains | Q34565084 | ||
| In vivo growth characteristics of leucine and methionine auxotrophic mutants of Mycobacterium bovis BCG generated by transposon mutagenesis. | Q35394135 | ||
| Predominance of a single genotype of Mycobacterium tuberculosis in countries of east Asia | Q36526614 | ||
| Characterization of Mycobacterium tuberculosis complex direct repeat sequence for use in cycling probe reaction. | Q36541980 | ||
| Differentiation of Mycobacterium tuberculosis isolates by spoligotyping and IS6110 restriction fragment length polymorphism. | Q36543501 | ||
| Genetic characterization of multidrug-resistant Mycobacterium bovis strains from a hospital outbreak involving human immunodeficiency virus-positive patients | Q36544424 | ||
| Identification by spoligotyping of a caprine genotype in Mycobacterium bovis strains causing human tuberculosis | Q36548345 | ||
| Tuberculosis in the Caribbean: using spacer oligonucleotide typing to understand strain origin and transmission | Q37093685 | ||
| Simultaneous detection and strain differentiation of Mycobacterium tuberculosis complex in paraffin wax embedded tissues and in stained microscopic preparations | Q37641280 | ||
| Genotypic analysis of Mycobacterium tuberculosis from medieval human remains | Q38325355 | ||
| Replication and control of circular bacterial plasmids. | Q39523346 | ||
| Unusual nucleotide arrangement with repeated sequences in the Escherichia coli K-12 chromosome | Q39949398 | ||
| Repeated DNA sequences in mycobacteria | Q40502756 | ||
| Molecular epidemiology of tuberculosis in Cuba outside of Havana, July 1994-June 1995: utility of spoligotyping versus IS6110 restriction fragment length polymorphism. | Q40841457 | ||
| Epidemiology of tuberculosis by DNA fingerprinting | Q40963309 | ||
| DNA typing of a nonviable culture of Mycobacterium tuberculosis in a homeless shelter outbreak. | Q42724234 | ||
| Long tandemly repeated repetitive (LTRR) sequences in the filamentous cyanobacterium Anabaena sp. PCC 7120. | Q48063355 | ||
| Is Mycobacterium tuberculosis 15,000 years old? | Q48078215 | ||
| Transcontinental spread of multidrug-resistant Mycobacterium bovis | Q77822613 | ||
| P433 | issue | 9 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | Mycobacterium tuberculosis | Q130971 |
| genetic variation | Q349856 | ||
| P304 | page(s) | 2393-2401 | |
| P577 | publication date | 2000-05-01 | |
| P1433 | published in | Journal of Bacteriology | Q478419 |
| P1476 | title | Genetic variation and evolutionary origin of the direct repeat locus of Mycobacterium tuberculosis complex bacteria | |
| P478 | volume | 182 |
| Q33258814 | "A re-evaluation of M. prototuberculosis": continuing the debate |
| Q41698239 | A Genomic Signature for Genotyping Mycobacterium tuberculosis |
| Q33571077 | A conformal Bayesian network for classification of Mycobacterium tuberculosis complex lineages |
| Q30998666 | A first assessment of the genetic diversity of Mycobacterium tuberculosis complex in Cambodia |
| Q39774111 | A fragment of 21 ORFs around the direct repeat (DR) region of Mycobacterium tuberculosis is absent from the other sequenced mycobacterial genomes: implications for the evolution of the DR region |
| Q24531514 | A new evolutionary scenario for the Mycobacterium tuberculosis complex |
| Q33998177 | A putative viral defence mechanism in archaeal cells |
| Q37110848 | African 1, an epidemiologically important clonal complex of Mycobacterium bovis dominant in Mali, Nigeria, Cameroon, and Chad |
| Q34491702 | African 2, a clonal complex of Mycobacterium bovis epidemiologically important in East Africa |
| Q33753193 | Analysis of Mycobacterium tuberculosis genotypes in Madrid and identification of two new families specific to Spain-related settings |
| Q39467070 | Application of a simple multiplex PCR to aid in routine work of the mycobacterium reference laboratory |
| Q36539815 | Application of sensitive and specific molecular methods to uncover global dissemination of the major RDRio Sublineage of the Latin American-Mediterranean Mycobacterium tuberculosis spoligotype family |
| Q34132063 | Bacterial artificial chromosome-based comparative genomic analysis identifies Mycobacterium microti as a natural ESAT-6 deletion mutant |
| Q30377265 | Bacterial strain typing in the genomic era. |
| Q36567354 | Bottlenecks and broomsticks: the molecular evolution of Mycobacterium bovis |
| Q33712112 | CRISPR associated diversity within a population of Sulfolobus islandicus |
| Q33900548 | CRISPR inhibition of prophage acquisition in Streptococcus pyogenes |
| Q47421848 | CRISPR/Cas9-Based Counterselection Boosts Recombineering Efficiency in Pseudomonas putida. |
| Q34004457 | CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats |
| Q39786713 | CRISPRcompar: a website to compare clustered regularly interspaced short palindromic repeats. |
| Q38155766 | CRISPRs: molecular signatures used for pathogen subtyping |
| Q24550628 | Characterization of Mycobacterium tuberculosis complex DNAs from Egyptian mummies by spoligotyping |
| Q37597468 | Characterization of ancestral Mycobacterium tuberculosis by multiple genetic markers and proposal of genotyping strategy |
| Q59127565 | Class 2 CRISPR/Cas: an expanding biotechnology toolbox for and beyond genome editing |
| Q37702404 | Clonal expansion of a globally disseminated lineage of Mycobacterium tuberculosis with low IS6110 copy numbers. |
| Q38917393 | Clustered Regularly Interspaced Short Palindromic Repeats: Challenges in Treating Retinal Disease |
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| Q58520065 | Combined evaluation of bovine tuberculosis in wild boar (Sus scrofa) and red deer (Cervus elaphus) from Central-East Portugal |
| Q34748753 | Comparative genotyping of Campylobacter jejuni by amplified fragment length polymorphism, multilocus sequence typing, and short repeat sequencing: strain diversity, host range, and recombination |
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| Q34161481 | Data-driven insights into deletions of Mycobacterium tuberculosis complex chromosomal DR region using spoligoforests |
| Q37511376 | Definition of the Beijing/W lineage of Mycobacterium tuberculosis on the basis of genetic markers |
| Q42041230 | Detection and molecular characterization of Mycobacterium microti isolates in wild boar from northern Italy |
| Q34201116 | Detection of embB306 mutations in ethambutol-susceptible clinical isolates of Mycobacterium tuberculosis from Northwestern Russia: implications for genotypic resistance testing |
| Q39664517 | Determining the genomic locations of repetitive DNA sequences with a whole-genome microarray: IS6110 in Mycobacterium tuberculosis |
| Q34143606 | Discriminatory power and reproducibility of novel DNA typing methods for Mycobacterium tuberculosis complex strains |
| Q39712816 | Efficient discrimination within a Corynebacterium diphtheriae epidemic clonal group by a novel macroarray-based method |
| Q36154214 | Epidemiologic consequences of microvariation in Mycobacterium tuberculosis |
| Q50597432 | Exploring the use of molecular epidemiology to track bovine tuberculosis in Nigeria: an overview from 2002 to 2004. |
| Q90727162 | First insights into the genetic characteristics and drug resistance of Mycobacterium tuberculosis population collected during the first national tuberculosis prevalence survey of Lao PDR (2010-2011) |
| Q33541750 | First insights into the genetic diversity of Mycobacterium tuberculosis isolates from HIV-infected Mexican patients and mutations causing multidrug resistance |
| Q34314875 | Function and regulation of clustered regularly interspaced short palindromic repeats (CRISPR) / CRISPR associated (Cas) systems. |
| Q41953893 | Gene transfer and genome plasticity in Thermotoga maritima, a model hyperthermophilic species |
| Q91728327 | Genetic diversity and drug resistance pattern of Mycobacterium tuberculosis strains isolated from pulmonary tuberculosis patients in the Benishangul Gumuz region and its surroundings, Northwest Ethiopia |
| Q46266841 | Genetic diversity assessment of Tunisian Mycobacterium bovis population isolated from cattle. |
| Q34643081 | Genetic diversity of Mycobacterium tuberculosis in Mbarara, South Western Uganda |
| Q33972003 | Genetic diversity of Mycobacterium tuberculosis in Sicily based on spoligotyping and variable number of tandem DNA repeats and comparison with a spoligotyping database for population-based analysis |
| Q34616646 | Genome-wide analysis of synonymous single nucleotide polymorphisms in Mycobacterium tuberculosis complex organisms: resolution of genetic relationships among closely related microbial strains. |
| Q34784801 | Genomic characterization of an endemic Mycobacterium tuberculosis strain: evolutionary and epidemiologic implications |
| Q35685931 | Genomics and Machine Learning for Taxonomy Consensus: The Mycobacterium tuberculosis Complex Paradigm |
| Q24816125 | Genotyping of Mycobacterium tuberculosis clinical isolates in two cities of Turkey: description of a new family of genotypes that is phylogeographically specific for Asia Minor |
| Q37848824 | Genotyping of Mycobacterium tuberculosis: application in epidemiologic studies |
| Q47827843 | Genotyping of the Mycobacterium tuberculosis complex using MIRUs: association with VNTR and spoligotyping for molecular epidemiology and evolutionary genetics. |
| Q41039964 | High genetic diversity revealed by variable-number tandem repeat genotyping and analysis of hsp65 gene polymorphism in a large collection of "Mycobacterium canettii" strains indicates that the M. tuberculosis complex is a recently emerged clone of " |
| Q34107006 | High prevalence of KatG Ser315Thr substitution among isoniazid-resistant Mycobacterium tuberculosis clinical isolates from northwestern Russia, 1996 to 2001. |
| Q24794991 | High resolution, on-line identification of strains from the Mycobacterium tuberculosis complex based on tandem repeat typing |
| Q58888386 | High spoligotype diversity within a Mycobacterium bovis population: Clues to understanding the demography of the pathogen in Europe |
| Q34983691 | IS 6110 -Mediated Deletion Polymorphism in the Direct Repeat Region of Clinical Isolates of Mycobacterium tuberculosis |
| Q39463774 | Identification of a contaminating Mycobacterium tuberculosis strain with a transposition of an IS6110 insertion element resulting in an altered spoligotype |
| Q29615790 | Identification of genes that are associated with DNA repeats in prokaryotes |
| Q34990299 | Improvement of differentiation and interpretability of spoligotyping for Mycobacterium tuberculosis complex isolates by introduction of new spacer oligonucleotides |
| Q58888406 | Improvement of spoligotyping with additional spacer sequences for characterization of Mycobacterium bovis and M. caprae isolates from Spain |
| Q34769170 | Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis |
| Q28486140 | Insights into the origin, emergence, and current spread of a successful Russian clone of Mycobacterium tuberculosis |
| Q34119100 | Investigation on Mycobacterium tuberculosis diversity in China and the origin of the Beijing clade |
| Q59794753 | Line-probe assay and molecular typing reveal a potential drug resistant clone of in Ethiopia |
| Q28727934 | MLVA based classification of Mycobacterium tuberculosis complex lineages for a robust phylogeographic snapshot of its worldwide molecular diversity |
| Q33968809 | Mapping of IS6110 insertion sites in two epidemic strains of Mycobacterium tuberculosis |
| Q43556751 | Mathematical modelling of Mycobacterium tuberculosis VNTR loci estimates a very slow mutation rate for the repeats |
| Q64137500 | McSpoligotyping, a One-Step Melting Curve Analysis-Based Protocol for Spoligotyping of Mycobacterium tuberculosis |
| Q28389409 | Methodological and Clinical Aspects of the Molecular Epidemiology of Mycobacterium tuberculosis and Other Mycobacteria |
| Q30749810 | Microevolution of the direct repeat region of Mycobacterium tuberculosis: implications for interpretation of spoligotyping data. |
| Q33387450 | Models of deletion for visualizing bacterial variation: an application to tuberculosis spoligotypes |
| Q36133799 | Molecular Typing of Mycobacterium bovis from Cattle Reared in Midwest Brazil. |
| Q34315398 | Molecular analysis of human and bovine tubercle bacilli from a local setting in Nigeria |
| Q33352799 | Molecular characterisation of Mycobacterium bovis isolated from cattle slaughtered at the Bamako abattoir in Mali |
| Q38696366 | Molecular characterization of Mycobacterium tuberculosis isolates from elephants of Nepal. |
| Q35601855 | Molecular differentiation of Mycobacterium bovis isolates. Review of main techniques and applications. |
| Q38476490 | Molecular epidemiology of multidrug-resistant Mycobacterium bovis isolates with the same spoligotyping profile as isolates from animals. |
| Q34135780 | Molecular epidemiology of tuberculosis and other mycobacterial infections: main methodologies and achievements |
| Q35070843 | Molecular epidemiology of tuberculosis: current insights |
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| Q37075105 | Molecular identification of streptomycin monoresistant Mycobacterium tuberculosis related to multidrug-resistant W strain |
| Q41730918 | Molecular typing of Mycobacterium bovis isolated in the south of Brazil. |
| Q35101942 | Multihost tuberculosis: insights from the portuguese control program |
| Q36153028 | Multiple-locus variable number tandem repeats analysis for genetic fingerprinting of pathogenic bacteria. |
| Q37597630 | Mycobacterium africanum genotyping using novel spacer oligonucleotides in the direct repeat locus |
| Q37302145 | Mycobacterium microti: More diverse than previously thought |
| Q34083039 | Mycobacterium tuberculosis complex DNA from an extinct bison dated 17,000 years before the present |
| Q29615131 | Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology |
| Q33858850 | Mycobacterium tuberculosis spoligotypes and drug susceptibility pattern of isolates from tuberculosis patients in South-Western Uganda |
| Q39697659 | Novel IS6110 insertion sites in the direct repeat locus of Mycobacterium tuberculosis clinical strains from the St. Petersburg area of Russia and evolutionary and epidemiological considerations |
| Q31043162 | Novel genetic polymorphisms that further delineate the phylogeny of the Mycobacterium tuberculosis complex |
| Q28769314 | Origin and primary dispersal of the Mycobacterium tuberculosis Beijing genotype: clues from human phylogeography |
| Q34975273 | PCR-based method to differentiate the subspecies of the Mycobacterium tuberculosis complex on the basis of genomic deletions |
| Q44463433 | PCR-based methodology for detecting multidrug-resistant strains of Mycobacterium tuberculosis Beijing family circulating in Russia. |
| Q33341375 | Persistence and molecular evolution of Mycobacterium bovis population from cattle and wildlife in Doñana National Park revealed by genotype variation. |
| Q47409707 | Phylogenetic reconstruction within Mycobacterium tuberculosis Beijing genotype in northwestern Russia |
| Q35880501 | Predominant tuberculosis spoligotypes, Delhi, India |
| Q35066970 | Preferential deletion events in the direct repeat locus of Mycobacterium tuberculosis |
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