review article | Q7318358 |
scholarly article | Q13442814 |
P2093 | author name string | M Espinosa | |
G del Solar | |||
R Díaz-Orejas | |||
R Giraldo | |||
M J Ruiz-Echevarría | |||
P2860 | cites work | Replication-specific inactivation of the pT181 plasmid initiator protein | Q72593200 |
Interaction of the plasmid R6K-encoded replication initiator protein with its binding sites on DNA | Q72791834 | ||
A 27 kd protein of E. coli promotes antitermination of replication in vitro at a sequence-specific replication terminus | Q72941314 | ||
Replication control of plasmid pLS1: the antisense RNA II and the compact rnaII region are involved in translational regulation of the initiator RepB synthesis | Q73000064 | ||
Chaperone-mediated reduction of RepA dimerization is associated with RepA conformational change | Q73909173 | ||
Protein-DNA recognition | Q22065421 | ||
Linear plasmids and chromosomes in bacteria | Q22065693 | ||
Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya | Q22066209 | ||
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice | Q24286950 | ||
Conserved sequence motifs in the initiator proteins for rolling circle DNA replication encoded by diverse replicons from eubacteria, eucaryotes and archaebacteria | Q24604023 | ||
Copy-number of broad host-range plasmid R1162 is regulated by a small RNA | Q24610378 | ||
RepR protein expression on plasmid pIP501 is controlled by an antisense RNA-mediated transcription attenuation mechanism | Q24670620 | ||
Crystal structure of the replication terminator protein from B. subtilis at 2.6 A | Q27730379 | ||
Structure of a replication-terminator protein complexed with DNA | Q27733701 | ||
The leucine zipper: a hypothetical structure common to a new class of DNA binding proteins | Q27860587 | ||
pT181 plasmid replication is regulated by a countertranscript-driven transcriptional attenuator | Q28239146 | ||
Attenuation in amino acid biosynthetic operons | Q28262530 | ||
Copy number of the broad host-range plasmid R1162 is determined by the amounts of essential plasmid-encoded proteins | Q28284913 | ||
Prediction of protein secondary structure at better than 70% accuracy | Q29547323 | ||
Characterization of a plasmid from Helicobacter pylori encoding a replication protein common to plasmids in Gram-positive bacteria | Q33301637 | ||
Plasmid RSF1010 DNA replicationin vitropromoted by purified RSF1010 RepA, RepB and RepC proteins | Q33339261 | ||
Enhancer-origin interaction in plasmid R6K involves a DNA loop mediated by initiator protein | Q68273726 | ||
Specificity of RepC protein in plasmid pT181 DNA replication | Q68708758 | ||
Multiple mechanisms for initiation of ColE1 DNA replication: DNA synthesis in the presence and absence of ribonuclease H | Q69012389 | ||
Static and initiator protein-enhanced bending of DNA at a replication origin | Q69602022 | ||
DnaA protein binding to the plasmid origin region can substitute for primosome assembly during replication of pBR322 in vitro | Q69687611 | ||
Specificity of the interactions between the Rep proteins and the origins of replication of Staphylococcus aureus plasmids pT181 and pC221 | Q69705873 | ||
RepB' is required in trans for the two single-strand DNA initiation signals in oriV of plasmid RSF1010 | Q69750265 | ||
Synthesis of single-stranded plasmid pT181 DNA in vitro. Initiation and termination of DNA replication | Q69936603 | ||
Replication of pBR322 DNA in vitro with purified proteins. Requirement for topoisomerase I in the maintenance of template specificity | Q70093088 | ||
Conformational changes in a replication origin induced by an initiator protein | Q70117842 | ||
DNA-protein interaction at the origin of DNA replication of the plasmid pSC101 | Q70179300 | ||
Analysis of the trfA region of broad host-range plasmid RK2 by transposon mutagenesis and identification of polypeptide products | Q70214289 | ||
Initiation of plasmid pC194 replication and its control in Bacillus subtilis | Q70374934 | ||
Molecular cloning of the replication terminus of the plasmid R6K | Q70872031 | ||
An unusually long-lived antisense RNA in plasmid copy number control: in vivo RNAs encoded by the streptococcal plasmid pIP501 | Q70873299 | ||
Structural and functional analysis of the single-strand origin of replication from the lactococcal plasmid pWV01 | Q70874849 | ||
Gene transfer from bacteria to mammalian cells | Q71360369 | ||
Replication control of plasmid pLS1: efficient regulation of plasmid copy number is exerted by the combined action of two plasmid components, CopG and RNA II | Q71575660 | ||
Dissection of the core and auxiliary sequences in the vegetative replication origin of promiscuous plasmid RK2 | Q71588059 | ||
Control of replication of the Lactobacillus pentosus plasmid p353-2: evidence for a mechanism involving transcriptional attenuation of the gene coding for the replication protein | Q71613105 | ||
Change of a catalytic reaction carried out by a DNA replication protein | Q71669061 | ||
Control of plasmid replication: a synthesis occasioned by the recent EMBO Workshop "Replication of Prokaryotic DNA," held at de Eemhof, The Netherlands, May 1982 (organizers: Veltkamp and Weisbeek) | Q71695292 | ||
Identification of a common fold in the replication terminator protein suggests a possible mode for DNA binding | Q72042010 | ||
Bidirectional replication from an internal origin in a linear streptomyces plasmid | Q72112182 | ||
Lagging-strand origins of the promiscuous plasmid pMV158: physical and functional characterization | Q72144945 | ||
Localization of the start sites of lagging-strand replication of rolling-circle plasmids from gram-positive bacteria | Q72318972 | ||
Definition of oriR, the minimum DNA segment essential for initiation of R1 plasmid replication in vitro | Q37510913 | ||
Protein RepC is involved in copy number control of the broad host range plasmid RSF1010. | Q37532844 | ||
Absence of RNase H allows replication of pBR322 in Escherichia coli mutants lacking DNA polymerase I | Q37580451 | ||
The replication initiator protein pi of the plasmid R6K specifically interacts with the host-encoded helicase DnaB. | Q37591002 | ||
Regulatory regions of ColE1 that are involved in determination of plasmid copy number | Q37613175 | ||
A protein that binds to the P1 origin core and the oriC 13mer region in a methylation-specific fashion is the product of the host seqA gene | Q37621716 | ||
Rolling-circle replication of the plasmid pKYM isolated from a gram-negative bacterium | Q37623672 | ||
Active site of the replication protein of the rolling circle plasmid pC194. | Q37636400 | ||
Replication-specific conversion of the Staphylococcus aureus pT181 initiator protein from an active homodimer to an inactive heterodimer | Q37638219 | ||
Plasmid pT181 replication is regulated by two countertranscripts | Q37676159 | ||
Termination of DNA replication in vitro: requirement for stereospecific interaction between two dimers of the replication terminator protein of Bacillus subtilis and with the terminator site to elicit polar contrahelicase and fork impedance | Q37694132 | ||
Three Escherichia coli heat shock proteins are required for P1 plasmid DNA replication: formation of an active complex between E. coli DnaJ protein and the P1 initiator protein | Q37732358 | ||
Control of plasmid replication--how do DNA iterons set the replication frequency? | Q38012140 | ||
Partition-mediated incompatibility of bacterial plasmids | Q38141252 | ||
Recent studies on the control of plasmid replication | Q38186053 | ||
ColE1 replication control circuitry: sense from antisense | Q38195625 | ||
In vitro recognition of the replication origin of pLS1 and of plasmids of the pLS1 family by the RepB initiator protein | Q38288634 | ||
Determination of sequence specificity between a plasmid replication initiator protein and the origin of replication | Q38288873 | ||
Primer RNA synthesis by plasmid-specified Rep protein for initiation of ColE2 DNA replication | Q38290247 | ||
Excess intracellular concentration of the pSC101 RepA protein interferes with both plasmid DNA replication and partitioning | Q38313815 | ||
Essentiality of the three carboxyl-terminal amino acids of the plasmid RK2 replication initiation protein TrfA for DNA binding and replication activity in gram-negative bacteria | Q38314118 | ||
Information analysis of sequences that bind the replication initiator RepA. | Q38315904 | ||
Activation of DNA binding by the monomeric form of the P1 replication initiator RepA by heat shock proteins DnaJ and DnaK. | Q38317649 | ||
Six amino acids determine the sequence-specific DNA binding and replication specificity of the initiator proteins of the pT181 family | Q38323750 | ||
Mapping of the in vivo start site for leading strand DNA synthesis in plasmid R1 | Q38324038 | ||
Cooperativity at a distance promoted by the combined action of two replication initiator proteins and a DNA bending protein at the replication origin of pSC101. | Q38334049 | ||
Deletion analysis of the mini-P1 plasmid origin of replication and the role of Escherichia coli DnaA protein | Q38340064 | ||
Control of replication of plasmid R1: the duplex between the antisense RNA, CopA, and its target, CopT, is processed specifically in vivo and in vitro by RNase III | Q38340311 | ||
In vitro studies of the initiation of staphylococcal plasmid replication. Specificity of RepD for its origin (oriD) and characterization of the Rep-ori tyrosyl ester intermediate | Q38341298 | ||
Initiation of replication of plasmid pMV158: mechanisms of DNA strand-transfer reactions mediated by the initiator RepB protein | Q38345762 | ||
The inactive pT181 initiator heterodimer, RepC/C, binds but fails to induce melting of the plasmid replication origin | Q38350662 | ||
Modification of the plasmid initiator protein RepC active site during replication | Q38351101 | ||
Mechanisms of initiation and termination reactions in conjugative DNA processing. Independence of tight substrate binding and catalytic activity of relaxase (TraI) of IncPalpha plasmid RP4. | Q38357475 | ||
Detection of DNA looping due to simultaneous interaction of a DNA-binding protein with two spatially separated binding sites on DNA | Q33643024 | ||
Lagging-strand replication from the ssoA origin of plasmid pMV158 in Streptococcus pneumoniae: in vivo and in vitro influences of mutations in two conserved ssoA regions. | Q33721895 | ||
tus, the trans-acting gene required for termination of DNA replication in Escherichia coli, encodes a DNA-binding protein | Q33840724 | ||
A host-encoded DNA-binding protein promotes termination of plasmid replication at a sequence-specific replication terminus | Q33851981 | ||
Initiation of rolling-circle replication in pT181 plasmid: initiator protein enhances cruciform extrusion at the origin | Q33878225 | ||
Illegitimate recombination occurs between the replication origin of the plasmid pC194 and a progressing replication fork | Q33881304 | ||
P1 plasmid replication requires methylated DNA. | Q33929748 | ||
Control of pT181 replication I. The pT181 copy control function acts by inhibiting the synthesis of a replication protein. | Q33939990 | ||
Control of pT181 replication II. Mutational analysis. | Q33939995 | ||
Origin recognition specificity in pT181 plasmids is determined by a functionally asymmetric palindromic DNA element. | Q34040351 | ||
The helix-turn-helix DNA binding motif | Q34045093 | ||
DNA polymerase III holoenzyme: structure and function of a chromosomal replicating machine | Q34058015 | ||
Measurement of gene expression by translational coupling: effect of copy mutations on pT181 initiator synthesis | Q34059890 | ||
Open-complex formation by the host initiator, DnaA, at the origin of P1 plasmid replication | Q34069162 | ||
Replication control of plasmid R1: RepA synthesis is regulated by CopA RNA through inhibition of leader peptide translation | Q34249608 | ||
Roles of topoisomerase IV and DNA gyrase in DNA unlinking during replication in Escherichia coli | Q34297971 | ||
Negative control of plasmid R6K replication: possible role of intermolecular coupling of replication origins | Q34312512 | ||
Escherichia coli replication termination protein impedes the action of helicases | Q34321585 | ||
Control of P1 plasmid replication by iterons | Q34399153 | ||
Replication control of plasmid P1 and its host chromosome: the common ground. | Q34428016 | ||
Initiator protein pi can bind independently to two domains of the gamma origin core of plasmid R6K: the direct repeats and the A+T-rich segment | Q34596064 | ||
Functional analysis of a palindromic sequence required for normal replication of several staphylococcal plasmids | Q34611752 | ||
Replication of mini-P1 plasmid DNA in vitro requires two initiation proteins, encoded by the repA gene of phage P1 and the dnaA gene of Escherichia coli | Q34627054 | ||
RepA and DnaA proteins are required for initiation of R1 plasmid replication in vitro and interact with the oriR sequence | Q34638147 | ||
Initiation signals for the conversion of single stranded to double stranded DNA forms in the streptococcal plasmid pLS1. | Q34692380 | ||
Control of ColE1 plasmid replication by antisense RNA. | Q34854330 | ||
Origin of replication of colicin E1 plasmid DNA | Q35026082 | ||
Origin of replication of pBR345 plasmid DNA | Q35048004 | ||
Replication of colicin E1 plasmid DNA added to cell extracts | Q35073535 | ||
Bidirectional replication of plasmid R6K DNA in Escherichia coli; correspondence between origin of replication and position of single-strand break in relaxed complex | Q35084728 | ||
The nucleotide sequence surrounding the replication terminus of R6K. | Q35341182 | ||
Replication of plasmid pT181 DNA in vitro: requirement for a plasmid-encoded product | Q35459424 | ||
Arrest of bacterial DNA replication | Q35534717 | ||
Single-stranded plasmid DNA in Bacillus subtilis and Staphylococcus aureus | Q35599903 | ||
P1 plasmid replication. Role of initiator titration in copy number control | Q41454629 | ||
Activation of distant replication origins in vivo by DNA looping as revealed by a novel mutant form of an initiator protein defective in cooperativity at a distance | Q41519828 | ||
Replication of the streptococcal plasmid pMV158 and derivatives in cell-free extracts of Escherichia coli. | Q41862701 | ||
Replication and incompatibility properties of plasmid pUB110 in Bacillus subtilis | Q41913991 | ||
The E. coli cell cycle and the plasmid R1 replication cycle in the absence of the DnaA protein | Q42057261 | ||
Plasmid rolling circle replication: identification of the RNA polymerase-directed primer RNA and requirement for DNA polymerase I for lagging strand synthesis | Q42060307 | ||
Complete nucleotide sequence of Birmingham IncP alpha plasmids. Compilation and comparative analysis | Q42597254 | ||
The complete nucleotide sequence of a small cryptic plasmid from a rumen bacterium of the genus Butyrivibrio | Q42619810 | ||
Nucleotide sequence and characterization of the broad-host-range lactococcal plasmid pWVO1 | Q42621264 | ||
Structural and functional organization of ColE2 and ColE3 replicons | Q42644371 | ||
Complete nucleotide sequence and gene organization of the broad-host-range plasmid RSF1010. | Q42644411 | ||
Isolation and structure of the replicon of the promiscuous plasmid pCU1. | Q42648371 | ||
Role of TrfA and DnaA proteins in origin opening during initiation of DNA replication of the broad host range plasmid RK2. | Q42661197 | ||
Analysis of the halobacterial plasmid pHK2 minimal replicon | Q42691350 | ||
Theta replication of the lactococcal plasmid pWVO2. | Q42694149 | ||
Complete nucleotide sequences of Bacillus plasmids pUB110dB, pRBH1 and its copy mutants | Q43018671 | ||
The Staphylococcus aureus mutation pcrA3 leads to the accumulation of pT181 replication initiation complexes | Q43757108 | ||
Roles of phi X174 type primosome- and G4 type primase-dependent primings in initiation of lagging and leading strand syntheses of DNA replication | Q43779984 | ||
Cre-lox recombination in Escherichia coli cells. Mechanistic differences from the in vitro reaction | Q44251314 | ||
A replication initiator protein enhances the rate of hybrid formation between a silencer RNA and an activator RNA. | Q44373396 | ||
Mini-P1 plasmid replication: the autoregulation-sequestration paradox | Q44412217 | ||
Purification of pT181-encoded repC protein required for the initiation of plasmid replication | Q44447483 | ||
In vivo definition of the functional origin of replication (ori(+)) of the promiscuous plasmid pLS1. | Q44582374 | ||
Unique sequence requirements for the P1 plasmid replication origin | Q44843013 | ||
Two distinct mechanisms of synthesis of DNA fragments on colicin E1 plasmid DNA | Q45154971 | ||
Leading strand synthesis of R1 plasmid replication in vitro is primed by primase alone at a specific site downstream of oriR. | Q45963786 | ||
Replication origin of the broad host range plasmid RK2. Positioning of various motifs is critical for initiation of replication. | Q45999258 | ||
The sequence encoding the 43-kilodalton trfA protein is required for efficient replication or maintenance of minimal RK2 replicons in Pseudomonas aeruginosa | Q46441306 | ||
Isolation and characterization of DNA-binding mutants of a plasmid replication initiation protein utilizing an in vivo binding assay | Q46625332 | ||
The role of topoisomerase IV in partitioning bacterial replicons and the structure of catenated intermediates in DNA replication | Q46625387 | ||
Isolation and characterization of pLS1 plasmid mutants with increased copy numbers | Q48063159 | ||
Characterization of the Staphylococcus aureus chromosomal gene pcrA, identified by mutations affecting plasmid pT181 replication | Q48099560 | ||
Activation in vivo of the minimal replication origin beta of plasmid R6K requires a small target sequence essential for DNA looping | Q48175632 | ||
Identification of eleven single-strand initiation sequences (ssi) for priming of DNA replication in the F, R6K, R100 and ColE2 plasmids | Q48198332 | ||
Conformational changes induced by integration host factor at origin gamma of R6K and copy number control | Q48214428 | ||
Mutational and physiological analyses of plasmid pT181 functions expressing incompatibility | Q48279914 | ||
P1 plasmid replication requires Escherichia coli Dam-methylated DNA. | Q48308314 | ||
Core sequence of two separable terminus sites of the R6K plasmid that exhibit polar inhibition of replication is a 20 bp inverted repeat | Q48317635 | ||
Comparative analysis of five related Staphylococcal plasmids | Q48324751 | ||
A replication origin is turned off by an origin-"silencer" sequence | Q48355066 | ||
Replication of pSC101: effects of mutations in the E. coli DNA binding protein IHF. | Q48363199 | ||
Analysis of the vegetative replication origin of broad-host-range plasmid RK2 by transposon mutagenesis | Q48367900 | ||
Directly repeated, 20-bp sequence of plasmid R1162 DNA is required for replication, expression of incompatibility, and copy-number control | Q48370430 | ||
P1 plasmid replication: replicon structure | Q48392040 | ||
Effects of point mutations on formation and structure of the RNA primer for ColE1 DNA replication | Q48393031 | ||
Structural properties of the beta origin of replication of plasmid R6K. | Q48399016 | ||
A comparison of the origin of replication of pSa with R6K | Q48400763 | ||
Plasmid R6K DNA replication. I. Complete nucleotide sequence of an autonomously replicating segment | Q48402522 | ||
Base pairing of RNA I with its complementary sequence in the primer precursor inhibits ColE1 replication | Q48407065 | ||
Nine unique repeating sequences in a region essential for replication and incompatibility of the mini-F plasmid | Q48407667 | ||
Direct repeats of the F plasmid incC region express F incompatibility | Q48409396 | ||
Nucleotide sequence of the region of the origin of replication of the broad host range plasmid RK2. | Q48411328 | ||
A leucine zipper motif determines different functions in a DNA replication protein | Q38361596 | ||
Genes involved in conjugative DNA processing of plasmid R6K | Q38557119 | ||
The family of highly interrelated single-stranded deoxyribonucleic acid plasmids | Q38669585 | ||
Staphylococcal plasmids and their replication | Q38705491 | ||
Replication of plasmids in gram-negative bacteria | Q38733478 | ||
A model for initiation at origins of DNA replication | Q39256067 | ||
Single-stranded DNA phage origins | Q39485983 | ||
Plasmid incompatibility. | Q39694297 | ||
Structure and Replication of the Colicin E1 Plasmid | Q39782437 | ||
Isolation and characterization of plasmid mutations that enable partitioning of pSC101 replicons lacking the partition (par) locus | Q39835740 | ||
Host growth temperature and a conservative amino acid substitution in the replication protein of pPS10 influence plasmid host range. | Q39837764 | ||
Boundaries of the pSC101 minimal replicon are conditional | Q39838077 | ||
Comparative analysis of the replicon regions of eleven ColE2-related plasmids | Q39899216 | ||
Minimal essential origin of plasmid pSC101 replication: requirement of a region downstream of iterons. | Q39937002 | ||
The pSC101 par locus alters protein-DNA interactions in vivo at the plasmid replication origin | Q39937040 | ||
Characterization of a phage-plasmid hybrid (phasyl) with two independent origins of replication isolated from Escherichia coli | Q39938712 | ||
Integration host factor of Escherichia coli reverses the inhibition of R6K plasmid replication by pi initiator protein | Q39939090 | ||
The phenotypes of temperature-sensitive mini-RK2 replicons carrying mutations in the replication control gene trfA are suppressed nonspecifically by intragenic cop mutations | Q39939554 | ||
Replication and segregational stability of Bacillus plasmid pBAA1 | Q39948095 | ||
Replication origins of single-stranded-DNA plasmid pUB110. | Q39949285 | ||
RNase H and replication of ColE1 DNA in Escherichia coli | Q39965250 | ||
Origin and direction of mini-R1 plasmid DNA replication in cell extracts of Escherichia coli | Q39971580 | ||
Role of Nine Repeating Sequences of the Mini-F Genome for Expression of F-Specific Incompatibility Phenotype and Copy Number Control | Q39976326 | ||
Nucleotide sequence of an incompatibility region of mini-Rts1 that contains five direct repeats. | Q39976776 | ||
Mutations in R Factors ofEscherichia coliCausing an Increased Number of R-Factor Copies per Chromosome | Q40098809 | ||
Control of replication of bacterial plasmids: Genetics, molecular biology, and physiology of the plasmid R1 system | Q40112314 | ||
Replication of the colicin E1 plasmid in extracts of Escherichia coli: Uncoupling of leading strand from lagging strand synthesis | Q40290112 | ||
Bulged-out nucleotides protect an antisense RNA from RNase III cleavage | Q40393036 | ||
Bulged-out nucleotides in an antisense RNA are required for rapid target RNA binding in vitro and inhibition in vivo | Q40393044 | ||
Characterization of single strand origins of cryptic rolling-circle plasmids from Bacillus subtilis | Q40393077 | ||
Effects of the pSC101 partition (par) locus on in vivo DNA supercoiling near the plasmid replication origin | Q40393160 | ||
The level of the pUB110 replication initiator protein is autoregulated, which provides an additional control for plasmid copy number | Q40394232 | ||
Characterization of the replication region of the Bacillus subtilis plasmid pLS20: a novel type of replicon. | Q40395425 | ||
Specific binding of the replication protein of plasmid pPS10 to direct and inverted repeats is mediated by an HTH motif | Q40397137 | ||
Functional difference between the two oppositely oriented priming signals essential for the initiation of the broad host-range plasmid RSF1010 DNA replication | Q40398756 | ||
The heat-shock DnaK protein is required for plasmid R1 replication and it is dispensable for plasmid ColE1 replication | Q40412737 | ||
The structure of the initiation complex at the replication origin, oriC, of Escherichia coli | Q40412850 | ||
A base-paired hairpin structure essential for the functional priming signal for DNA replication of the broad host range plasmid RSF1010. | Q40416696 | ||
The involvement of host replication proteins and of specific origin sequences in the in vitro replication of miniplasmid R1 DNA | Q40417185 | ||
DnaA dependent replication of plasmid R1 occurs in the presence of point mutations that disrupt the dnaA box of oriR. | Q40422409 | ||
Purification and characterization of RepA, a protein involved in the copy number control of plasmid pLS1. | Q40448386 | ||
Plasmid rolling circle replication and its control. | Q40468044 | ||
Discriminatory function of ribonuclease H in the selective initiation of plasmid DNA replication | Q40492742 | ||
Rifampicin-resistant initiation of DNA synthesis on the isolated strands of CoIE plasmid DNA | Q40500167 | ||
Common sequence motifs in DNA relaxases and nick regions from a variety of DNA transfer systems | Q40504722 | ||
Roles of the G site and phi X174-type primosome assembly site in priming of leading-strand synthesis: initiation by a mobile primosome and replication-fork arrest by RepA protein bound to oriR. | Q52225630 | ||
Control of mini-R1 plasmid replication: a computer simulation. | Q52399890 | ||
Control of ColE2 plasmid replication: negative regulation of the expression of the plasmid-specified initiator protein, Rep, at a posttranscriptional step. | Q52513371 | ||
Regulation of IncFII plasmid DNA replication. A quantitative model for control of plasmid NR1 replication in the bacterial cell division cycle. | Q52618161 | ||
Transcription of repA, the gene of the initiation protein of the Pseudomonas plasmid pPS10, is autoregulated by interactions of the RepA protein at a symmetrical operator. | Q54012553 | ||
Identification and analysis of genes for tetracycline resistance and replication functions in the broad-host-range plasmid pLS1. | Q54142053 | ||
Isolation and characterization of a conditional replication mutant of the antibiotic resistance factor R1 affected in the gene of the replication protein repA. | Q54354534 | ||
Binding of purified wild-type and mutant pi initiation proteins to a replication origin region of plasmid R6K. | Q54433896 | ||
Plasmid R1 DNA replication dependent on protein synthesis in cell-free extracts of E. coli. | Q54539871 | ||
Trans-complementable copy-number mutants of plasmid ColE1. | Q54559090 | ||
Determination of specific DNA strand discontinuities with nucleotide resolution in exponentionally growing bacteria harboring rolling circle-replicating plasmids. | Q54562104 | ||
Sequence requirements for the termination of rolling-circle replication of plasmid pT181. | Q54566649 | ||
The ColE1 unidirectional origin acts as a polar replication fork pausing site. | Q54580894 | ||
Three novel plasmid R6K proteins act in concert to distort DNA within the alpha and beta origins of DNA replication. | Q54592490 | ||
Dissociation kinetics of RepA dimers: implications for mechanisms of activation of DNA binding by chaperones. | Q54593988 | ||
The contrahelicase activities of the replication terminator proteins of Escherichia coli and Bacillus subtilis are helicase-specific and impede both helicase translocation and authentic DNA unwinding. | Q54598519 | ||
The interaction of Escherichia coli topoisomerase IV with DNA. | Q54601468 | ||
Multiple roles for DNA polymerase I in establishment and replication of the promiscuous plasmid pLS1. | Q54624692 | ||
The copR gene product of plasmid pIP501 acts as a transcriptional repressor at the essential repR promoter. | Q54625357 | ||
Control of ColE2 plasmid replication: regulation of Rep expression by a plasmid-coded antisense RNA. | Q54630442 | ||
Topoisomerase IV can support oriC DNA replication in vitro. | Q54632039 | ||
Host-inhibitory functions encoded by promiscuous plasmids. Transient arrest of Escherichia coli segregants that fail to inherit plasmid RK2. | Q54637512 | ||
Functional features of oriV of the broad host range plasmid RSF1010 in Pseudomonas aeruginosa. | Q54639121 | ||
Isolation and characterization of ClpX, a new ATP-dependent specificity component of the Clp protease of Escherichia coli. | Q54649560 | ||
Autoregulation-deficient mutant of the plasmid R6K-encoded pi protein distinguishes between palindromic and nonpalindromic binding sites. | Q54649687 | ||
Genetic and functional analysis of the basic replicon of pPS10, a plasmid specific for Pseudomonas isolated from Pseudomonas syringae patovar savastanoi. | Q54684492 | ||
Structurally stable Bacillus subtilis cloning vectors. | Q54716721 | ||
The replication terminator protein of E. coli is a DNA sequence-specific contra-helicase. | Q54722403 | ||
Functionality of the dnaA protein binding site in DNA replication is orientation-dependent. | Q54752888 | ||
DNA sequence analysis of host range mutants of the promiscuous IncP-1 plasmids R18 and R68 with Tn7 insertions in oriV. | Q54763955 | ||
The integration host factor of Escherichia coli binds to bent DNA at the origin of replication of the plasmid pSC101. | Q54764277 | ||
Regulation of mini-F plasmid DNA replication. A quantitative model for control of plasmid mini-F replication in the bacterial cell division cycle. | Q54764975 | ||
Bacterial zipper | Q59003148 | ||
Function of DnaJ and DnaK as chaperones in origin-specific DNA binding by RepA | Q59066558 | ||
Specific Nicking-Closing Activity of the Initiator of Replication Protein RepB of Plasmid pMV158 on Supercoiled or Single-stranded DNA | Q59261571 | ||
Replication of the promiscuous plasmid pLSI: a region encompassing the minus origin of replication is associated with stable plasmid inheritance | Q62019588 | ||
Initiation of replication of plasmid pLS1 | Q62019591 | ||
Monomer–dimer Equilibrium of the pSC101 RepA Protein | Q62372447 | ||
Computer-assisted dissection of rolling circle DNA replication | Q64389862 | ||
The replication initiator protein of plasmid R6K tagged with beta-galactosidase shows sequence-specific DNA-binding | Q67265285 | ||
Ribonucleotide-deoxyribonucleotide linkages at the origin of DNA replication of colicin E1 plasmid | Q67319176 | ||
The copy number of plasmid pLS1 is regulated by two trans-acting plasmid products: the antisense RNA II and the repressor protein, RepA | Q67531747 | ||
A mechanism of formation of a persistent hybrid between elongating RNA and template DNA | Q67664935 | ||
Antisense RNA | Q67698980 | ||
Specificity of origin recognition by replication initiator protein in plasmids of the pT181 family is determined by a six amino acid residue element | Q67729397 | ||
Differential inhibition of the DNA translocation and DNA unwinding activities of DNA helicases by the Escherichia coli Tus protein | Q67849287 | ||
Two alternative structures can be formed by IHF protein binding to the plasmid R6K gamma origin | Q67945546 | ||
Differential binding of wild-type and a mutant RepA protein to oriR sequence suggests a model for the initiation of plasmid R1 replication | Q67971013 | ||
Sequence of plasmid pGT5 from the archaeon Pyrococcus abyssi: evidence for rolling-circle replication in a hyperthermophile | Q35608034 | ||
Host participation in plasmid maintenance: dependence upon dnaA of replicons derived from P1 and F | Q35611641 | ||
An 18-base-pair sequence is sufficient for termination of rolling-circle replication of plasmid pT181 | Q35611818 | ||
In vitro inhibitory activity of RepC/C*, the inactivated form of the pT181 plasmid initiation protein, RepC. | Q35618514 | ||
Prokaryotic DNA replication | Q35671078 | ||
The nucleotide sequence of replication and maintenance functions encoded by plasmid PSCl0l | Q35685934 | ||
Conserved DNA structures in origins of replication | Q35833856 | ||
Identification of the origin and direction of replication of the broad-host-range plasmid pLS1. | Q35940056 | ||
A molecular chaperone, ClpA, functions like DnaK and DnaJ. | Q35968116 | ||
Plasmid pT181-linked suppressors of the Staphylococcus aureus pcrA3 chromosomal mutation | Q36102250 | ||
Plasmids of the pT181 family show replication-specific initiator protein modification | Q36106912 | ||
Analysis of mutations in trfA, the replication initiation gene of the broad-host-range plasmid RK2 | Q36112681 | ||
Mutation in the plasmid pUB110 Rep protein affects termination of rolling circle replication. | Q36121719 | ||
Evidence of two levels of control of P1 oriR and host oriC replication origins by DNA adenine methylation | Q36124611 | ||
Cleavage of single-stranded DNA by plasmid pT181-encoded RepC protein | Q36127711 | ||
Critical sequences in the core of the P1 plasmid replication origin | Q36147487 | ||
DNA bending near the replication origin of IncFII plasmid NR1 | Q36173762 | ||
Nucleotide sequence analysis and expression of the minimum REPI replication region and incompatibility determinants of pColV-K30. | Q36176084 | ||
Plasmid structural instability associated with pC194 replication functions | Q36176307 | ||
Region of the streptococcal plasmid pMV158 required for conjugative mobilization | Q36181454 | ||
DnaA protein is not essential for replication of IncFII plasmid NR1 | Q36182428 | ||
P1 plasmid replication: initiator sequestration is inadequate to explain control by initiator-binding sites | Q36210816 | ||
Gene organization in the region containing a new gene involved in chromosome partition in Escherichia coli | Q36213780 | ||
Replication of the broad host range plasmid RSF1010: requirement for three plasmid-encoded proteins | Q36252887 | ||
A single DnaA box is sufficient for initiation from the P1 plasmid origin | Q36255044 | ||
Primary structure of the replication initiation protein of plasmid R6K. | Q36311708 | ||
Plasmid ColE1 incompatibility determined by interaction of RNA I with primer transcript | Q36373617 | ||
Formation of an RNA primer for initiation of replication of ColE1 DNA by ribonuclease H | Q36386816 | ||
Expression of a DNA strand initiation sequence of ColE1 plasmid in a single-stranded DNA phage | Q36415041 | ||
Replication of the nonconjugative plasmid RSF1010 in Escherichia coli K-12 | Q36461608 | ||
Dissecting the functional role of PriA protein-catalysed primosome assembly in Escherichia coli DNA replication | Q36467595 | ||
Decatenation activity of topoisomerase IV during oriC and pBR322 DNA replication in vitro | Q36540037 | ||
Rolling-circle replication of bacterial plasmids. | Q36574388 | ||
Specific cleavage of chromosomal and plasmid DNA strands in gram-positive and gram-negative bacteria can be detected with nucleotide resolution | Q36657355 | ||
A fourth class of theta-replicating plasmids: the pAM beta 1 family from gram-positive bacteria. | Q36720247 | ||
Mechanism of protein remodeling by ClpA chaperone | Q36762714 | ||
Replication of single-stranded plasmid pT181 DNA in vitro | Q36769248 | ||
Uncoupling of the DNA topoisomerase and replication activities of an initiator protein. | Q36937061 | ||
Structural and functional analysis of a replication enhancer: separation of the enhancer activity from origin function by mutational dissection of the replication origin gamma of plasmid R6K | Q37043301 | ||
Monomers and dimers of the RepA protein in plasmid pSC101 replication: domains in RepA | Q37214602 | ||
Structure of the ColE1 DNA molecule before segregation to daughter molecules | Q37268446 | ||
Protein-priming of DNA replication | Q37285250 | ||
Nucleotide sequence of the region of an origin of replication of the antibiotic resistance plasmid R6K | Q37319954 | ||
Functional division and reconstruction of a plasmid replication origin: molecular dissection of the oriV of the broad-host-range plasmid RSF1010 | Q37362075 | ||
Sequence-specific interaction between the replication initiator protein of plasmid pT181 and its origin of replication | Q37391997 | ||
Positive and negative roles of an initiator protein at an origin of replication | Q37412117 | ||
Replication of Colicin E1 Plasmid DNA in Cell Extracts. Origin and Direction of Replication | Q37447398 | ||
Molecular analysis of the replication region of the conjugative Streptococcus agalactiae plasmid pIP501 in Bacillus subtilis. Comparison with plasmids pAM beta 1 and pSM19035 | Q40522488 | ||
Gene F of plasmid RSF1010 codes for a low-molecular-weight repressor protein that autoregulates expression of the repAC operon | Q40525452 | ||
Similarity of minus origins of replication and flanking open reading frames of plasmids pUB110, pTB913 and pMV158. | Q40537469 | ||
Functional analysis of the leading strand replication origin of plasmid pUB110 in Bacillus subtilis | Q40555922 | ||
Antisense RNA control in bacteria, phages, and plasmids | Q40573014 | ||
Replication arrest | Q40599662 | ||
Processes at the nick region link conjugation, T-DNA transfer and rolling circle replication | Q40637095 | ||
Regulation of replication of an iteron-containing DNA molecule | Q40639080 | ||
Kinetic aspects of control of plasmid replication by antisense RNA. | Q40682089 | ||
Antisense RNA-mediated transcriptional attenuation occurs faster than stable antisense/target RNA pairing: an in vitro study of plasmid pIP501 | Q40792752 | ||
Primosome assembly site in Bacillus subtilis | Q40806967 | ||
Replication of plasmid pSC101 inEscherichia coli K12: Requirement fordnaA function | Q40831542 | ||
Rolling circle-replicating plasmids from gram-positive and gram-negative bacteria: a wall falls. | Q40836977 | ||
Isolation and characterization of the minimal fragment required for autonomous replication (“Basic replicon”) of a copy mutant (pKN102) of the antibiotic resistance factor R1 | Q40913723 | ||
Activity of the replication terminus of plasmid R6K in hybrid replicons in Escherichia coli | Q40957759 | ||
A runaway-replication mutant of plasmid R1drd-19: Temperature-dependent loss of copy number control | Q40982761 | ||
Unidirectional theta replication of the structurally stable Enterococcus faecalis plasmid pAM beta 1. | Q41081761 | ||
Mechanism of replication and copy number control of plasmids in gram-positive bacteria | Q41094302 | ||
A novel replicon occurring naturally in Escherichia coli is a phage-plasmid hybrid | Q41095349 | ||
DNA replication of IncQ broad-host-range plasmids in gram-negative bacteria | Q41195864 | ||
Rolling circle replication of single-stranded DNA plasmid pC194. | Q41358042 | ||
A two-stage molecular model for control of mini-F replication | Q41360999 | ||
P433 | issue | 2 | |
P407 | language of work or name | English | Q1860 |
P304 | page(s) | 434-464 | |
P577 | publication date | 1998-06-01 | |
P1433 | published in | Microbiology and Molecular Biology Reviews | Q6839270 |
P1476 | title | Replication and control of circular bacterial plasmids | |
P478 | volume | 62 |
Q35602043 | 55.2, a phage T4 ORFan gene, encodes an inhibitor of Escherichia coli topoisomerase I and increases phage fitness |
Q35946761 | A Bacillus anthracis-based in vitro system supports replication of plasmid pXO2 as well as rolling-circle-replicating plasmids |
Q89483087 | A Dual-Replicon Shuttle Vector System for Heterologous Gene Expression in a Broad Range of Gram-Positive and Gram-Negative Bacteria |
Q37717881 | A New Broad Range Plasmid for DNA Delivery in Eukaryotic Cells Using Lactic Acid Bacteria: In Vitro and In Vivo Assays |
Q58797128 | A Post-segregational Killing Mechanism for Maintaining Plasmid PMF1 in Its Host |
Q39685412 | A cis-acting element that directs circular adeno-associated virus replication and packaging |
Q42029317 | A dnaC mutation in Escherichia coli that affects copy number of ColE1-like plasmids and the PriA-PriB (but not Rep-PriC) pathway of chromosomal replication restart |
Q34794815 | A genetically economical family of plasmid-encoded transcriptional repressors involved in control of plasmid copy number |
Q37301978 | A new minimal replicon of Bacillus anthracis plasmid pXO1. |
Q64387298 | A new role for Escherichia coli Dam DNA methylase in prevention of aberrant chromosomal replication |
Q34508871 | A novel FtsZ-like protein is involved in replication of the anthrax toxin-encoding pXO1 plasmid in Bacillus anthracis |
Q35535622 | A novel erythromycin resistance plasmid from Bacillus sp. strain HS24, isolated from the marine sponge Haliclona simulans |
Q56895492 | A novel method for transforming the thermophilic bacterium Geobacillus kaustophilus |
Q38648472 | A versatile one-step CRISPR-Cas9 based approach to plasmid-curing. |
Q64115099 | Accessory genome of the multi-drug resistant ocular isolate of Pseudomonas aeruginosa PA34 |
Q34942357 | Acquisition through horizontal gene transfer of plasmid pSMA198 by Streptococcus macedonicus ACA-DC 198 points towards the dairy origin of the species |
Q37181824 | Actinomycete integrative and conjugative elements |
Q28492361 | Agrobacterium ParA/MinD-like VirC1 spatially coordinates early conjugative DNA transfer reactions |
Q35223548 | An improved method for including upper size range plasmids in metamobilomes |
Q35029204 | Analyzing DNA strand compositional asymmetry to identify candidate replication origins of Borrelia burgdorferi linear and circular plasmids |
Q43182320 | Anatomy of the replication origin of plasmid ColE2-P9. |
Q35482661 | Archaeal extrachromosomal genetic elements |
Q64387692 | Atypical location of double-strand origin of replication (nic site) on the plasmid pGA1 from Corynebacterium glutamicum |
Q42073502 | Autoregulation of the synthesis of the MobM relaxase encoded by the promiscuous plasmid pMV158. |
Q43182291 | Autorepression of RctB, an initiator of Vibrio cholerae chromosome II replication |
Q37096900 | Bacillus anthracis and Bacillus cereus PcrA helicases can support DNA unwinding and in vitro rolling-circle replication of plasmid pT181 of Staphylococcus aureus |
Q34355915 | Breaking and joining single-stranded DNA: the HUH endonuclease superfamily |
Q38221309 | Bringing them together: plasmid pMV158 rolling circle replication and conjugation under an evolutionary perspective. |
Q42148640 | CRISPR adaptation biases explain preference for acquisition of foreign DNA |
Q41461380 | Characterization and Comparative Overview of Complete Sequences of the First Plasmids of Pandoraea across Clinical and Non-clinical Strains |
Q36136830 | Characterization of Mobile Staphylococcus equorum Plasmids Isolated from Fermented Seafood That Confer Lincomycin Resistance |
Q64389557 | Characterization of a Cryptic Rolling-Circle Replication Plasmid pMK8 from Enterococcus durans 1-8 |
Q40209703 | Characterization of a Cryptic and Intriguing Low Molecular Weight Plasmid |
Q39425140 | Characterization of a Rolling-Circle Replication Plasmid pM411 from Lactobacillus plantarum 1-3. |
Q43024256 | Characterization of a cryptic plasmid from a Greenland ice core Arthrobacter isolate and construction of a shuttle vector that replicates in psychrophilic high G+C Gram-positive recipients |
Q35038398 | Characterization of a cryptic plasmid pSM429 and its application for heterologous expression in psychrophilic Pseudoalteromonas |
Q35073550 | Characterization of a novel plasmid, pMAH135, from Mycobacterium avium subsp. hominissuis |
Q42599527 | Characterization of a rolling-circle replication plasmid pLR1 from Lactobacillus plantarum LR1. |
Q34228239 | Characterization of a theta-type plasmid from Lactobacillus sakei: a potential basis for low-copy-number vectors in lactobacilli |
Q37572309 | Characterization of plasmid pOR1 from Ornithobacterium rhinotracheale and construction of a shuttle plasmid. |
Q34309708 | Characterization of plasmid pRT1 from Pyrococcus sp. strain JT1. |
Q36710478 | Characterization of replication and conjugation of Streptomyces circular plasmids pFP1 and pFP11 and their ability to propagate in linear mode with artificially attached telomeres |
Q39230593 | Characterization of the 16S-23S internal transcribed spacer among 34 higher plants: suitability for interspecific plastid transformation. |
Q33718931 | Characterization of the basic replicon of Rhodococcus plasmid pSOX and development of a Rhodococcus-Escherichia coli shuttle vector. |
Q33987612 | Characterization of the minimal replicon of a cryptic Deinococcus radiodurans SARK plasmid and development of versatile Escherichia coli-D. radiodurans shuttle vectors |
Q37701725 | Characterization of the novel Fusobacterium nucleatum plasmid pKH9 and evidence of an addiction system. |
Q39550877 | Characterization of the oriI and oriII origins of replication in phage-plasmid P4. |
Q34348207 | Characterization of the putative replisome organizer of the lactococcal bacteriophage r1t |
Q42863304 | Characterization of the replication region of plasmid pLS32 from the Natto strain of Bacillus subtilis |
Q47807133 | Citrate, low pH and amino acid limitation induce citrate utilization in Lactococcus lactis biovar diacetylactis. |
Q42634132 | Cloning and molecular characterization of a novel rolling-circle replicating plasmid, pK1S-1, from Bacillus thuringiensis subsp. kurstaki K1. |
Q27015843 | Clostridium perfringens type A-E toxin plasmids |
Q38659414 | Cnr interferes with dimerization of the replication protein alpha in phage-plasmid P4. |
Q92081765 | Comparative Analysis of Listeria monocytogenes Plasmids and Expression Levels of Plasmid-Encoded Genes during Growth under Salt and Acid Stress Conditions |
Q34010408 | Comparative biology of IncQ and IncQ-like plasmids |
Q55405783 | Comparative genomic analysis of Acinetobacter spp. plasmids originating from clinical settings and environmental habitats. |
Q34474862 | Comparative genomics of bacteria in the genus Providencia isolated from wild Drosophila melanogaster |
Q42144596 | Comparative transcription profiling and in-depth characterization of plasmid-based and plasmid-free Escherichia coli expression systems under production conditions |
Q37484916 | Comparison of the complete genome sequences of four γ-hexachlorocyclohexane-degrading bacterial strains: insights into the evolution of bacteria able to degrade a recalcitrant man-made pesticide. |
Q34008382 | Complete DNA sequence of Yersinia enterocolitica serotype 0:8 low-calcium-response plasmid reveals a new virulence plasmid-associated replicon |
Q89920596 | Complete Genome of a Member of a New Bacterial Lineage in the Microgenomates Group Reveals an Unusual Nucleotide Composition Disparity Between Two Strands of DNA and Limited Metabolic Potential |
Q34107881 | Complete genome sequence of the Phaeobacter gallaeciensis type strain CIP 105210(T) (= DSM 26640(T) = BS107(T)). |
Q42646691 | Complete nucleotide sequence of pGS18, a 62.8-kb plasmid from Geobacillus stearothermophilus strain 18. |
Q33855636 | Complete nucleotide sequence of the LE1 prophage from the spirochete Leptospira biflexa and characterization of its replication and partition functions |
Q33988070 | Complete nucleotide sequence of ubiquitous plasmid pEA29 from Erwinia amylovora strain Ea88: gene organization and intraspecies variation |
Q42624140 | Complete sequence and molecular characterization of pNB101, a rolling-circle replicating plasmid from the haloalkaliphilic archaeon Natronobacterium sp. strain AS7091. |
Q42603247 | Complete sequence of plasmid pMP1 from the marine environmental Vibrio vulnificus and location of its replication origin |
Q34232704 | Complete sequences of four plasmids of Lactococcus lactis subsp. cremoris SK11 reveal extensive adaptation to the dairy environment |
Q37538155 | Conjugative plasmids: vessels of the communal gene pool |
Q33711130 | Conserved small RNAs govern replication and incompatibility of a diverse new plasmid family from marine bacteria |
Q42039738 | Construction of a prophage-free variant of Corynebacterium glutamicum ATCC 13032 for use as a platform strain for basic research and industrial biotechnology |
Q51009910 | Construction of plasmid vectors for screening replicons from gram-positive bacteria and their use as shuttle cloning vectors. |
Q22065745 | Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125 |
Q39389337 | Copy number variability of expression plasmids determined by cell sorting and Droplet Digital PCR |
Q86715507 | Core genome and plasmidome of the quorum-quenching bacterium Rhodococcus erythropolis |
Q49408141 | Crosstalk between vertical and horizontal gene transfer: plasmid replication control by a conjugative relaxase |
Q36540441 | Cryptic Streptococcus mutans 5.6-kb plasmids encode a toxin-antitoxin system for plasmid stabilization |
Q42637956 | DNA translocation activity of the multifunctional replication protein ORF904 from the archaeal plasmid pRN1. |
Q38667880 | DNA-DNA kissing complexes as a new tool for the assembly of DNA nanostructures |
Q42000683 | Description of a 2,683-base-pair plasmid containing qnrD in two Providencia rettgeri isolates |
Q92629393 | Detection and characterization of a theta-replicating plasmid pLP60 from Lactobacillus plantarum PC518 by inverse PCR |
Q33808708 | Determination of plasmid copy number reveals the total plasmid DNA amount is greater than the chromosomal DNA amount in Bacillus thuringiensis YBT-1520 |
Q42432604 | Development of experimental genetic tools for Campylobacter fetus. |
Q38293591 | Different pathways to acquiring resistance genes illustrated by the recent evolution of IncW plasmids. |
Q39535195 | Directionality of lambda plasmid DNA replication carried out by the heritable replication complex |
Q34474883 | Distribution and diversity of mycoplasma plasmids: lessons from cryptic genetic elements. |
Q42909179 | Distribution and replication of the pathogenicity plasmid pPATH in diverse populations of the gall-forming bacterium Pantoea agglomerans. |
Q41768140 | Distribution of minichromosomes in individual Escherichia coli cells: implications for replication control. |
Q58547618 | DoriC 10.0: an updated database of replication origins in prokaryotic genomes including chromosomes and plasmids |
Q88152130 | Dynamics in Copy Numbers of Five Plasmids of a Dairy Lactococcus lactis Strain under Dairy-Related Conditions Including Near-Zero Growth Rates |
Q92595521 | Dynamics of DNA nicking and unwinding by the RepC-PcrA complex |
Q36757670 | Effects of biofilm growth on plasmid copy number and expression of antibiotic resistance genes in Enterococcus faecalis |
Q40420250 | Essentiality of the early transcript in the replication origin of the lactococcal prolate phage c2. |
Q36825381 | Evolutionary Paths That Expand Plasmid Host-Range: Implications for Spread of Antibiotic Resistance |
Q33820219 | Fate and Persistence of a Pathogenic NDM-1-Positive Escherichia coli Strain in Anaerobic and Aerobic Sludge Microcosms |
Q34152536 | Folded DNA in action: hairpin formation and biological functions in prokaryotes. |
Q30822000 | Force and twist dependence of RepC nicking activity on torsionally-constrained DNA molecules. |
Q33532792 | Frequency and diversity of small cryptic plasmids in the genus Rahnella |
Q42737874 | Functional analysis of cis- and trans-acting replication factors of porcine circovirus type 1 |
Q35078452 | Functional characterization of the origin of replication of pRN1 from Sulfolobus islandicus REN1H1. |
Q37405351 | Generation of a stable plasmid for in vitro and in vivo studies of Staphylococcus |
Q33789784 | Genetic variation and evolutionary origin of the direct repeat locus of Mycobacterium tuberculosis complex bacteria |
Q34107742 | Genome sequence and emended description of Leisingera nanhaiensis strain DSM 24252(T) isolated from marine sediment |
Q37543617 | Genome sequence of Phaeobacter daeponensis type strain (DSM 23529(T)), a facultatively anaerobic bacterium isolated from marine sediment, and emendation of Phaeobacter daeponensis |
Q37544198 | Genome sequence of the Leisingera aquimarina type strain (DSM 24565(T)), a member of the marine Roseobacter clade rich in extrachromosomal elements |
Q37544221 | Genome sequence of the phage-gene rich marine Phaeobacter arcticus type strain DSM 23566(T.). |
Q52595412 | Genomic analysis of oral Campylobacter concisus strains identified a potential bacterial molecular marker associated with active Crohn's disease. |
Q42134029 | Genomic comparison of archaeal conjugative plasmids from Sulfolobus |
Q21266709 | Genomic determinants of organohalide-respiration in Geobacter lovleyi, an unusual member of the Geobacteraceae |
Q34119622 | Genomic insights into bifidobacteria |
Q39503136 | Genomic sequence and transcriptional analysis of a 23-kilobase mycobacterial linear plasmid: evidence for horizontal transfer and identification of plasmid maintenance systems |
Q24681753 | Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum |
Q35233714 | Genomics of microbial plasmids: classification and identification based on replication and transfer systems and host taxonomy |
Q35087738 | Hundreds of circular novel plasmids and DNA elements identified in a rat cecum metamobilome |
Q33993372 | Identification and characterization of an active plasmid partition mechanism for the novel Lactococcus lactis plasmid pCI2000 |
Q37613008 | Identification of IncA/C Plasmid Replication and Maintenance Genes and Development of a Plasmid Multilocus Sequence Typing Scheme |
Q42024565 | Identification of the origin of transfer (oriT) and DNA relaxase required for conjugation of the integrative and conjugative element ICEBs1 of Bacillus subtilis |
Q41838691 | Identification, characterization and preliminary X-ray diffraction analysis of the rolling-circle replication initiator protein from plasmid pSTK1. |
Q42121457 | Improved cloning vectors for bifidobacteria, based on the Bifidobacterium catenulatum pBC1 replicon |
Q64056410 | In vivo continuous evolution of metabolic pathways for chemical production |
Q39977166 | Interactions between horizontally acquired genes create a fitness cost in Pseudomonas aeruginosa |
Q42854097 | Interactions between the RepB initiator protein of plasmid pMV158 and two distant DNA regions within the origin of replication. |
Q41429543 | Interference-driven spacer acquisition is dominant over naive and primed adaptation in a native CRISPR-Cas system |
Q37080816 | Is tRNA only a translation factor or also a regulator of other processes? |
Q34075181 | Isolation and characterization of two novel plasmids from pathogenic Leptospira interrogans serogroup Canicola Serovar Canicola strain Gui44. |
Q92340006 | Isolation and characterization of two novel plasmids pCYM01 and pCYM02 of Cylindrospermum stagnale |
Q39708809 | Isolation and molecular characterization of pMG160, a mobilizable cryptic plasmid from Rhodobacter blasticus |
Q40736906 | Isolation of a minireplicon of the plasmid pG6303 of Lactobacillus plantarum G63 and characterization of the plasmid-encoded Rep replication protein |
Q36314786 | Iteron-binding ORF157 and FtsZ-like ORF156 proteins encoded by pBtoxis play a role in its replication in Bacillus thuringiensis subsp. israelensis |
Q90074857 | Lactococcus Ceduovirus Phages Isolated from Industrial Dairy Plants-from Physiological to Genomic Analyses |
Q41832400 | Lagging-strand DNA replication origins are required for conjugal transfer of the promiscuous plasmid pMV158. |
Q58770602 | Large plasmidome of dairy Lactococcus lactis subsp. lactis biovar diacetylactis FM03P encodes technological functions and appears highly unstable |
Q38257014 | Linking RNA polymerase backtracking to genome instability in E. coli |
Q33968809 | Mapping of IS6110 insertion sites in two epidemic strains of Mycobacterium tuberculosis |
Q27684327 | Mechanism of staphylococcal multiresistance plasmid replication origin assembly by the RepA protein |
Q35636113 | Mechanisms of Theta Plasmid Replication. |
Q30393789 | Metal-Induced Stabilization and Activation of Plasmid Replication Initiator RepB |
Q35129905 | Minireplicon from pBtoxis of Bacillus thuringiensis subsp. israelensis |
Q90697869 | Mobile Genetic Elements Associated with Antimicrobial Resistance |
Q33399917 | Mobile genetic elements in the genome of the beneficial rhizobacterium Pseudomonas fluorescens Pf-5. |
Q34980063 | Mobilizable Rolling-Circle Replicating Plasmids from Gram-Positive Bacteria: A Low-Cost Conjugative Transfer |
Q28748298 | Modulation of ColE1-like plasmid replication for recombinant gene expression |
Q39706000 | Modulation of pPS10 host range by plasmid-encoded RepA initiator protein |
Q33261266 | Molecular characterization of a DNA fragment harboring the replicon of pBMB165 from Bacillus thuringiensis subsp. tenebrionis |
Q39490456 | Molecular characterization of a theta replication plasmid and its use for development of a two-component food-grade cloning system for Lactococcus lactis |
Q33855941 | Molecular characterization of plasmid pBM300 from Bacillus megaterium QM B1551. |
Q36568723 | Molecular characterization of plasmid pMbo4.6 of Moraxella bovis ATCC 10900. |
Q35220626 | Molecular characterization of the minimal replicon and the unidirectional theta replication of pSCM201 in extremely halophilic archaea |
Q40183619 | Multi-platform analysis reveals a complex transcriptome architecture of a circovirus |
Q39361858 | Multipartite regulation of rctB, the replication initiator gene of Vibrio cholerae chromosome II. |
Q37336962 | Multiple consecutive initiation of replication producing novel brush-like intermediates at the termini of linear viral dsDNA genomes with hairpin ends |
Q33864292 | Multiple homeostatic mechanisms in the control of P1 plasmid replication |
Q39504886 | Multiple origins and replication proteins influence biological properties of beta-lactamase-producing plasmids from Neisseria gonorrhoeae |
Q34538652 | Multireplicon genome architecture of Lactobacillus salivarius |
Q36240751 | Networking in microbes: conjugative elements and plasmids in the genus Alteromonas |
Q42024649 | New TEM-derived extended-spectrum beta-lactamase and its genomic context in plasmids from Salmonella enterica serovar derby isolates from Uruguay |
Q30574660 | New quantitative methods for measuring plasmid loss rates reveal unexpected stability |
Q35791186 | Nonviral DNA vectors for immunization and therapy: design and methods for their obtention |
Q33674978 | Novel conjugative transferable multiple drug resistance plasmid pAQU1 from Photobacterium damselae subsp. damselae isolated from marine aquaculture environment. |
Q28750505 | Nucleotide sequence analysis of the enterotoxigenic Escherichia coli Ent plasmid |
Q40929147 | Ordering the bestiary of genetic elements transmissible by conjugation. |
Q33783917 | Ordering the mob: Insights into replicon and MOB typing schemes from analysis of a curated dataset of publicly available plasmids |
Q27322608 | Oscillations by minimal bacterial suicide circuits reveal hidden facets of host-circuit physiology |
Q37348639 | Palindrome regeneration by template strand-switching mechanism at the origin of DNA replication of porcine circovirus via the rolling-circle melting-pot replication model |
Q40259467 | Phage Lambda P protein: trans-activation, inhibition phenotypes and their suppression |
Q91643707 | Piscirickettsia salmonis Cryptic Plasmids: Source of Mobile DNA and Virulence Factors |
Q37398200 | Plasmid DNA vaccine vector design: impact on efficacy, safety and upstream production |
Q40315196 | Plasmid Replicons from Pseudomonas Are Natural Chimeras of Functional, Exchangeable Modules |
Q34732534 | Plasmid flux in Escherichia coli ST131 sublineages, analyzed by plasmid constellation network (PLACNET), a new method for plasmid reconstruction from whole genome sequences. |
Q42152072 | Plasmid pP62BP1 isolated from an Arctic Psychrobacter sp. strain carries two highly homologous type II restriction-modification systems and a putative organic sulfate metabolism operon |
Q38605696 | Plasmid stability analysis based on a new theoretical model employing stochastic simulations |
Q34889716 | Plasmid-encoded MCP is involved in virulence, motility, and biofilm formation of Cronobacter sakazakii ATCC 29544. |
Q35078208 | Plasmids are vectors for redundant chromosomal genes in the Bacillus cereus group |
Q34480448 | Plasmids from Food Lactic Acid Bacteria: Diversity, Similarity, and New Developments |
Q55400386 | Plasmids of Psychrotolerant Polaromonas spp. Isolated From Arctic and Antarctic Glaciers – Diversity and Role in Adaptation to Polar Environments. |
Q35048912 | Plasmids of carotenoid-producing Paracoccus spp. (Alphaproteobacteria) - structure, diversity and evolution |
Q36845090 | Precise determination, cross-recognition, and functional analysis of the double-strand origins of the rolling-circle replication plasmids in haloarchaea |
Q64093421 | Prevalence of Antibiotic and Heavy Metal Resistance Determinants and Virulence-Related Genetic Elements in Plasmids of Staphylococcus aureus. |
Q35092008 | Properties and construction of plasmid pFW213, a shuttle vector with the oral Streptococcus origin of replication |
Q42651088 | Protein domains and conformational changes in the activation of RepA, a DNA replication initiator |
Q90629800 | Protein-Mediated and RNA-Based Origins of Replication of Extrachromosomal Mycobacterial Prophages |
Q37052065 | Purification and characterization of the PcrA helicase of Bacillus anthracis |
Q33521368 | Quantitative analysis of replication-related mutation and selection pressures in bacterial chromosomes and plasmids using generalised GC skew index |
Q39647468 | R-loop-dependent rolling-circle replication and a new model for DNA concatemer resolution by mitochondrial plasmid mp1. |
Q24629552 | Rapidly expanding genetic diversity and host range of the Circoviridae viral family and other Rep encoding small circular ssDNA genomes |
Q33719322 | Rational Design of a Plasmid Origin That Replicates Efficiently in Both Gram-Positive and Gram-Negative Bacteria |
Q37065183 | Real-time transposable element activity in individual live cells. |
Q34421339 | Recombinant protein expression in Escherichia coli: advances and challenges |
Q60953419 | Reconsidering plasmid maintenance factors for computational plasmid design |
Q37156755 | Refinement of the Diatom Episome Maintenance Sequence and Improvement of Conjugation-Based DNA Delivery Methods |
Q43587861 | RepA protein of the bacteriophage N15 exhibits activity of DNA helicase |
Q33760204 | RepD-mediated recruitment of PcrA helicase at the Staphylococcus aureus pC221 plasmid replication origin, oriD. |
Q58797330 | Replicate Once Per Cell Cycle: Replication Control of Secondary Chromosomes |
Q34697498 | Replication control of staphylococcal multiresistance plasmid pSK41: an antisense RNA mediates dual-level regulation of Rep expression |
Q33992053 | Replication mechanism and sequence analysis of the replicon of pAW63, a conjugative plasmid from Bacillus thuringiensis |
Q35893427 | Replication of Enterococcus faecalis pheromone-responding plasmid pAD1: location of the minimal replicon and oriV site and RepA involvement in initiation of replication |
Q47108095 | Replication of Staphylococcal Resistance Plasmids. |
Q24651096 | Replication of porcine circoviruses |
Q35153980 | Replication-induced transcription of an autorepressed gene: the replication initiator gene of plasmid P1. |
Q90194804 | Reversed paired-gRNA plasmid cloning strategy for efficient genome editing in Escherichia coli |
Q59126981 | Revised role for Hfq bacterial regulator on DNA topology |
Q34351778 | Role of RepA and DnaA proteins in the opening of the origin of DNA replication of an IncB plasmid |
Q35139140 | Role of high-fidelity Escherichia coli DNA polymerase I in replication bypass of a deoxyadenosine DNA-peptide cross-link |
Q33788557 | Role of pi dimers in coupling ("handcuffing") of plasmid R6K's gamma ori iterons |
Q35198337 | Roles of DNA polymerase I in leading and lagging-strand replication defined by a high-resolution mutation footprint of ColE1 plasmid replication |
Q35075608 | Sequence analysis of the lactococcal plasmid pNP40: a mobile replicon for coping with environmental hazards |
Q40387879 | Sequence analysis of the mobile genome island pKLC102 of Pseudomonas aeruginosa C |
Q33638407 | Sequence and organization of pXO1, the large Bacillus anthracis plasmid harboring the anthrax toxin genes |
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