Revised role for Hfq bacterial regulator on DNA topology

scientific article published in Scientific Reports

Revised role for Hfq bacterial regulator on DNA topology is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1038/S41598-018-35060-9
P932PMC publication ID6235962
P698PubMed publication ID30429520

P50authorVéronique ArluisonQ60981362
Antoine MalabiradeQ62673003
P2093author name stringFrank Wien
Frédéric Geinguenaud
Florent Busi
Pierre Recouvreux
David Partouche
Thomas Bizien
Omar El Hamoui
Florian Turbant
P2860cites workCellular electron microscopy imaging reveals the localization of the Hfq protein close to the bacterial membraneQ21562607
Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: a bacterial Sm-like proteinQ24536928
DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcriptionQ24645477
Riboregulation in Escherichia coli: DsrA RNA acts by RNA:RNA interactions at multiple lociQ24645507
A trans-acting RNA as a control switch in Escherichia coli: DsrA modulates function by forming alternative structuresQ24652762
The Escherichia Coli Hfq Protein: An Unattended DNA-Transactions RegulatorQ26741702
Sm-like proteins in Eubacteria: the crystal structure of the Hfq protein from Escherichia coliQ27641658
Structure of Escherichia coli Hfq bound to polyriboadenylate RNAQ27658064
H-NS forms a superhelical protein scaffold for DNA condensationQ27664196
Structural basis for recognition of AT-rich DNA by unrelated xenogeneic silencing proteinsQ27670439
Structural basis for RNA 3'-end recognition by HfqQ27670724
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR productsQ27860842
The chromatin-associated protein H-NS interacts with curved DNA to influence DNA topology and gene expressionQ28201251
The small noncoding DsrA RNA is an acid resistance regulator in Escherichia coliQ28280186
Mechanism of RNA silencing by Hfq-binding small RNAsQ28294833
Selective binding of nuclear alpha-synuclein to the PGC1alpha promoter under conditions of oxidative stress may contribute to losses in mitochondrial function: implications for Parkinson's diseaseQ28576367
Hfq and its constellation of RNAQ29615791
Stretching DNAQ30040484
Crystal structure and RNA-binding properties of an Hfq homolog from the deep-branching Aquificae: conservation of the lateral RNA-binding modeQ30252727
Bacterial chromatin organization by H-NS protein unravelled using dual DNA manipulationQ33263766
Hfq affects mRNA levels independently of degradationQ33532281
A divalent switch drives H-NS/DNA-binding conformations between stiffening and bridging modes.Q33631136
Compaction and condensation of DNA mediated by the C-terminal domain of HfqQ33878109
Roles of topoisomerase IV and DNA gyrase in DNA unlinking during replication in Escherichia coliQ34297971
Characterization of broadly pleiotropic phenotypes caused by an hfq insertion mutation in Escherichia coli K-12.Q34327163
The elasticity of a single supercoiled DNA moleculeQ34374724
E. coli DNA associated with isolated Hfq interacts with Hfq's distal surface and C-terminal domainQ34769240
Structural insights into the dynamics and function of the C-terminus of the E. coli RNA chaperone Hfq.Q35040942
Recognition of the small regulatory RNA RydC by the bacterial Hfq proteinQ35111238
RNA reflections: converging on HfqQ35210918
Time-dependent DNA condensation induced by amyloid beta-peptideQ35220097
The propeller DNA conformation of poly(dA).poly(dT).Q35224477
New insight into the structure and function of Hfq C-terminusQ35548333
Effects of Hfq on the conformation and compaction of DNA.Q35562122
Negative regulation of mutS and mutH repair gene expression by the Hfq and RpoS global regulators of Escherichia coli K-12.Q35633546
Vacuum UV CD spectra of homopolymer duplexes and triplexes containing A.T or A.U base pairsQ35804160
Plasmids bearing hfq and the hns-like gene stpA complement hns mutants in modulating arginine decarboxylase gene expression in Escherichia coliQ35980094
Regulation of the Escherichia coli hfq gene encoding the host factor for phage Q betaQ36104877
Defined DNA sequences promote the assembly of a bacterial protein into distinct amyloid nanostructuresQ36141450
CD of homopolymer DNA-RNA hybrid duplexes and triplexes containing A-T or A-U base pairsQ36146372
Eukaryotic Lsm proteins: lessons from bacteriaQ36331209
Small RNA regulators and the bacterial response to stressQ36668567
Hfq structure, function and ligand bindingQ36774884
Lsm proteins and Hfq: Life at the 3' endQ37009111
Effect of salt and RNA structure on annealing and strand displacement by Hfq.Q37393528
The chromatin-associated protein H-NS alters DNA topology in vitroQ37627511
The Sm-like RNA chaperone Hfq mediates transcription antitermination at Rho-dependent terminators.Q38254988
Three-dimensional structures of fibrillar Sm proteins: Hfq and other Sm-like proteinsQ38317894
A genetic selection for supercoiling mutants of Escherichia coli reveals proteins implicated in chromosome structureQ38321551
Gene clusters reflecting macrodomain structure respond to nucleoid perturbations.Q38338657
Plasmid Replication Control by Antisense RNAsQ38535700
Compaction of bacterial genomic DNA: clarifying the conceptsQ38582183
Xenogeneic Silencing and Its Impact on Bacterial GenomesQ38881567
Replication and control of circular bacterial plasmids.Q39523346
H-NS mediated compaction of DNA visualised by atomic force microscopyQ39584438
Functional amyloids as inhibitors of plasmid DNA replicationQ41016827
Membrane association of the bacterial riboregulator Hfq and functional perspectives.Q41596542
Spatial organization of DNA sequences directs the assembly of bacterial chromatin by a nucleoid-associated proteinQ41897597
Hfq protein deficiency in Escherichia coli affects ColE1-like but not λ plasmid DNA replicationQ42219720
Protein-mediated molecular bridging: a key mechanism in biopolymer organizationQ42575832
Bacterial proteins required for replication of phage Q ribonucleic acid. Pruification and properties of host factor I, a ribonucleic acid-binding proteinQ44199523
Nuclear localization of alpha-synuclein and its interaction with histonesQ46597702
Torque and dynamics of linking number relaxation in stretched supercoiled DNA.Q46955285
DISCO synchrotron-radiation circular-dichroism endstation at SOLEIL.Q47254666
Lipid membranes catalyse the fibril formation of the amyloid-β (1-42) peptide through lipid-fibril interactions that reinforce secondary pathways.Q47822703
Applications of Magnetic Tweezers to Studies of NAPsQ47902988
Aggregation kinetics of bovine serum albumin studied by FTIR spectroscopy and light scattering.Q51037798
Calcium fluoride micro cells for synchrotron radiation circular dichroism spectroscopy.Q51345827
Riboregulation of the bacterial actin-homolog MreB by DsrA small noncoding RNA.Q54278546
Conformational transition of DNA bound to Hfq probed by infrared spectroscopy.Q54375682
Interaction of Escherichia coli RNA polymerase with the ribosomal protein S1 and the Sm-like ATPase Hfq.Q54522553
Structure ofPseudomonas aeruginosaHfq proteinQ57895135
Examination of the secondary structure of proteins by deconvolved FTIR spectraQ69484307
Twelve species of the nucleoid-associated protein from Escherichia coli. Sequence recognition specificity and DNA binding affinityQ73157405
Two types of localization of the DNA-binding proteins within the Escherichia coli nucleoidQ74187557
Real time analysis of the RNAI-RNAII-Rop complex by surface plasmon resonance: from a decaying surface to a standard kinetic analysisQ80626085
Molecular dynamics simulation of multivalent-ion mediated attraction between DNA moleculesQ81373149
The Escherichia coli RNA processing and degradation machinery is compartmentalized within an organized cellular networkQ86830196
Techniques to Analyze sRNA Protein Cofactor Self-Assembly In VitroQ87891802
Reversible Assembly of a Drug Peptide into Amyloid Fibrils: A Dynamic Circular Dichroism StudyQ88718792
Global DNA Compaction in Stationary-Phase Bacteria Does Not Affect TranscriptionQ90596876
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue1
P407language of work or nameEnglishQ1860
P304page(s)16792
P577publication date2018-11-14
P1433published inScientific ReportsQ2261792
P1476titleRevised role for Hfq bacterial regulator on DNA topology
P478volume8

Reverse relations

cites work (P2860)
Q64081901Characterization of Hfq Bacterial Amyloid: A Fourier-Transform Infrared Spectroscopy Study
Q90057977Crystal structure of an Escherichia coli Hfq Core (residues 2-69)-DNA complex reveals multifunctional nucleic acid binding sites
Q60923138Epigallocatechin Gallate Remodelling of Hfq Amyloid-Like Region Affects Survival
Q89975694RNA-Sequencing Analyses of Small Bacterial RNAs and their Emergence as Virulence Factors in Host-Pathogen Interactions
Q92256660Role of Hfq in Genome Evolution: Instability of G-Quadruplex Sequences in E. coli
Q91807373The Bacterial Amyloid-Like Hfq Promotes In Vitro DNA Alignment
Q91646433What Happens in the Staphylococcal Nucleoid under Oxidative Stress?

Search more.