Tracking F plasmid TraI relaxase processing reactions provides insight into F plasmid transfer

scientific article published on November 24, 2010

Tracking F plasmid TraI relaxase processing reactions provides insight into F plasmid transfer is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/NAR/GKQ1137
P953full work available at URLhttp://nar.oxfordjournals.org/cgi/content/abstract/39/7/2658
http://nar.oxfordjournals.org/cgi/content/full/39/7/2658
http://nar.oxfordjournals.org/cgi/reprint/39/7/2658.pdf
https://academic.oup.com/nar/article-pdf/39/7/2658/16780620/gkq1137.pdf
https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21109533/?tool=EBI
https://europepmc.org/articles/PMC3074121
https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21109533/pdf/?tool=EBI
https://europepmc.org/articles/PMC3074121?pdf=render
http://academic.oup.com/nar/article-pdf/39/7/2658/16780620/gkq1137.pdf
P932PMC publication ID3074121
P698PubMed publication ID21109533
P5875ResearchGate publication ID49637585

P50authorSichen ShaoQ41953076
P2093author name stringLubomír Dostál
Joel F. Schildbach
P2860cites workMfold web server for nucleic acid folding and hybridization predictionQ24498105
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The Structure of the Minimal Relaxase Domain of MobA at 2.1 Å ResolutionQ27640657
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Recognition and processing of the origin of transfer DNA by conjugative relaxase TrwCQ27642583
Plasmid replication initiator RepB forms a hexamer reminiscent of ring helicases and has mobile nuclease domainsQ27655468
Inter- and intramolecular determinants of the specificity of single-stranded DNA binding and cleavage by the F factor relaxase.Q30351581
DNA processing reactions in bacterial conjugationQ30417103
Positive charge is an important feature of the C-terminal transport signal of the VirB/D4-translocated proteins of Agrobacterium.Q30854480
Biological diversity of prokaryotic type IV secretion systems.Q30927042
DNA unwinding by Escherichia coli DNA helicase I (TraI) provides evidence for a processive monomeric molecular motor.Q54455405
Stepwise assembly of a relaxosome at the F plasmid origin of transfer.Q54599808
The traY gene product and integration host factor stimulate Escherichia coli DNA helicase I-catalyzed nicking at the F plasmid oriT.Q54599812
Purification and biochemical characterization of TrwC, the helicase involved in plasmid R388 conjugal DNA transfer.Q54622599
Escherichia coli DNA helicase I catalyzes a unidirectional and highly processive unwinding reaction.Q54751630
Subdomain organization and catalytic residues of the F factor TraI relaxase domainQ59264375
Biochemical characterization of Escherichia coli DNA helicase IQ67488577
Change of a catalytic reaction carried out by a DNA replication proteinQ71669061
Role of individual monomers of a dimeric initiator protein in the initiation and termination of plasmid rolling circle replicationQ73731298
The F plasmid-encoded TraM protein stimulates relaxosome-mediated cleavage at oriT through an interaction with TraIQ79613328
DNA synthesis during bacterial conjugation. II. Is DNA replication in the Hfr obligatory for chromosome transfer?Q93749880
General mutagenesis of F plasmid TraI reveals its role in conjugative regulationQ33254725
Conjugative transfer can be inhibited by blocking relaxase activity within recipient cells with intrabodies.Q33266305
A bipartite signal mediates the transfer of type IV secretion substrates of Bartonella henselae into human cellsQ33756268
In vitro assembly of relaxosomes at the transfer origin of plasmid RP4.Q33759096
Single-stranded DNA binding by F TraI relaxase and helicase domains is coordinately regulatedQ33963016
Plasmid rolling-circle replication: recent developmentsQ33994568
Site-specific recombinase and integrase activities of a conjugative relaxase in recipient cellsQ34132259
Multiple substrates of the Legionella pneumophila Dot/Icm system identified by interbacterial protein transfer.Q35554474
Plasmid rolling-circle replication: highlights of two decades of researchQ36057469
Swapping single-stranded DNA sequence specificities of relaxases from conjugative plasmids F and R100Q36160589
Relaxase (TraI) of IncP alpha plasmid RP4 catalyzes a site-specific cleaving-joining reaction of single-stranded DNA.Q36207419
Specific cleavage of chromosomal and plasmid DNA strands in gram-positive and gram-negative bacteria can be detected with nucleotide resolutionQ36657355
An intrastrand three-DNA-base interaction is a key specificity determinant of F transfer initiation and of F TraI relaxase DNA recognition and cleavageQ36824032
The diversity of conjugative relaxases and its application in plasmid classificationQ37461189
Conjugative DNA metabolism in Gram-negative bacteriaQ37634129
DNA recognition by F factor TraI36: highly sequence-specific binding of single-stranded DNA.Q38296916
Concerted action of three distinct domains in the DNA cleaving-joining reaction catalyzed by relaxase (TraI) of conjugative plasmid RP4.Q38311809
Two active-site tyrosyl residues of protein TrwC act sequentially at the origin of transfer during plasmid R388 conjugationQ38315911
Relaxase DNA binding and cleavage are two distinguishable steps in conjugative DNA processing that involve different sequence elements of the nic siteQ38347343
Mechanisms of initiation and termination reactions in conjugative DNA processing. Independence of tight substrate binding and catalytic activity of relaxase (TraI) of IncPalpha plasmid RP4.Q38357475
Replication and control of circular bacterial plasmids.Q39523346
Mistranslation in E. coliQ39802720
The requirements for conjugal DNA synthesis in the donor strain during Flac transferQ39861239
Nucleotide sequence of the tra YALE region from IncFV plasmid pED208.Q39961674
Two juxtaposed tyrosyl-OH groups participate in phi X174 gene A protein catalysed cleavage and ligation of DNAQ40561828
Analysis of the sequence and gene products of the transfer region of the F sex factorQ40625554
Codon-specific missense errors in vivo.Q41459471
Plasmid r1 conjugative DNA processing is regulated at the coupling protein interface.Q41813525
Analysis of DNA processing reactions in bacterial conjugation by using suicide oligonucleotides.Q42411932
Protein and DNA effectors control the TraI conjugative helicase of plasmid R1.Q42612963
Kinetic determinants of high-fidelity tRNA discrimination on the ribosomeQ44753572
Initiation and termination of DNA transfer at F plasmid oriT.Q46346774
Roles of active site residues and the HUH motif of the F plasmid TraI relaxaseQ46985714
F 1 sex factor of Escherichia coli. Size and purification in the form of a strand-specific relaxation complex of supercoiled deoxyribonucleic acid and proteinQ47378558
Kinetics of conjugative transfer: a study of the plasmid pXO16 from Bacillus thuringiensis subsp. israelensisQ47869109
P275copyright licenseCreative Commons Attribution-NonCommercial 2.5 GenericQ19113746
P6216copyright statuscopyrightedQ50423863
P433issue7
P407language of work or nameEnglishQ1860
P921main subjectconjugationQ22290285
P304page(s)2658-2670
P577publication date2010-11-24
P1433published inNucleic Acids ResearchQ135122
P1476titleTracking F plasmid TraI relaxase processing reactions provides insight into F plasmid transfer
P478volume39

Reverse relations

cites work (P2860)
Q35633340An activation domain of plasmid R1 TraI protein delineates stages of gene transfer initiation
Q34355915Breaking and joining single-stranded DNA: the HUH endonuclease superfamily
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Q33570169Common requirement for the relaxosome of plasmid R1 in multiple activities of the conjugative type IV secretion system
Q37104508Conjugative DNA Transfer Is Enhanced by Plasmid R1 Partitioning Proteins
Q41598108Cryo-EM Structure of a Relaxase Reveals the Molecular Basis of DNA Unwinding during Bacterial Conjugation.
Q91651486DNA processing by the MOBH family relaxase TraI encoded within the gonococcal genetic island
Q61807570From conjugation to T4S systems in Gram-negative bacteria: a mechanistic biology perspective
Q38122176Horizontal gene transfer in human pathogens
Q42181543Origin and fate of the 3' ends of single-stranded DNA generated by conjugal transfer of plasmid R1162
Q27024935Relaxosome function and conjugation regulation in F-like plasmids - a structural biology perspective
Q27679209Solution structure and small angle scattering analysis of TraI (381-569)
Q27678344Structure of a translocation signal domain mediating conjugative transfer by type IV secretion systems
Q34971946Structures of TraI in solution
Q37094827Thioredoxin-like proteins in F and other plasmid systems
Q97067481Transcriptome Analysis of Zygotic Induction During Conjugative Transfer of Plasmid RP4
Q52351418Transposase-DNA Complex Structures Reveal Mechanisms for Conjugative Transposition of Antibiotic Resistance.
Q34905620Tyrosine partners coordinate DNA nicking by the Salmonella typhimurium plasmid pCU1 relaxase enzyme

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