| review article | Q7318358 |
| scholarly article | Q13442814 |
| P2093 | author name string | Simons RW | |
| Wagner EG | |||
| P304 | page(s) | 713-742 | |
| P577 | publication date | 1994-01-01 | |
| P1433 | published in | Annual Review of Microbiology | Q15762942 |
| P1476 | title | Antisense RNA control in bacteria, phages, and plasmids | |
| P478 | volume | 48 |
| Q28255704 | A conserved RpoS-dependent small RNA controls the synthesis of major porin OmpD |
| Q34123679 | A genome-wide strategy for the identification of essential genes in Staphylococcus aureus |
| Q30014822 | A high-resolution map of transcription in the yeast genome |
| Q37592537 | A loop-loop "kissing" complex is the essential part of the dimer linkage of genomic HIV-1 RNA |
| Q37122019 | A modular strategy for engineering orthogonal chimeric RNA transcription regulators |
| Q28244120 | A multicopy sRNA of Listeria monocytogenes regulates expression of the virulence adhesin LapB |
| Q42270915 | A natural antisense transcript of the Petunia hybrida Sho gene suggests a role for an antisense mechanism in cytokinin regulation |
| Q41975860 | A remarkably stable kissing-loop interaction defines substrate recognition by the Neurospora Varkud Satellite ribozyme. |
| Q48047346 | A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutator |
| Q24684021 | A survey of small RNA-encoding genes in Escherichia coli |
| Q39647805 | A target specificity switch in IS911 transposition: the role of the OrfA protein |
| Q39720932 | A two unit antisense RNA cassette test system for silencing of target genes |
| Q39678997 | An antisense RNA-mediated transcriptional attenuation mechanism functions in Escherichia coli |
| Q37428819 | An automated proteogenomic method uses mass spectrometry to reveal novel genes in Zea mays |
| Q52126285 | An integrated approach for finding overlooked genes in yeast. |
| Q37079982 | An unsolved mystery: the target-recognizing RNA species of microRNA genes |
| Q34362441 | An unusual structure formed by antisense-target RNA binding involves an extended kissing complex with a four-way junction and a side-by-side helical alignment |
| Q33712153 | An upstream Hfq binding site in the fhlA mRNA leader region facilitates the OxyS-fhlA interaction |
| Q54566041 | Antisense RNA control of plasmid R1 replication. The dominant product of the antisense rna-mrna binding is not a full RNA duplex. |
| Q33289816 | Antisense RNA decreases AP33 gene expression and cytoadherence by T. vaginalis |
| Q35020983 | Antisense RNA downregulation of coenzyme A transferase combined with alcohol-aldehyde dehydrogenase overexpression leads to predominantly alcohologenic Clostridium acetobutylicum fermentations |
| Q33984370 | Antisense RNA strategies for metabolic engineering of Clostridium acetobutylicum |
| Q74238208 | Antisense RNAs everywhere? |
| Q28216929 | Antisense transcripts in the human genome |
| Q31147226 | Antisense transcripts with FANTOM2 clone set and their implications for gene regulation |
| Q34129310 | Antisense-RNA regulation and RNA interference |
| Q35732291 | Arterivirus discontinuous mRNA transcription is guided by base pairing between sense and antisense transcription-regulating sequences |
| Q31137120 | Assessment of the utilization of the antisense RNA strategy to identify essential genes in heterologous bacteria |
| Q34537427 | Bacterial antisense RNAs: how many are there, and what are they doing? |
| Q35872000 | Bacterial small RNAs in the Genus Rickettsia |
| Q33421117 | Biocomputational prediction of non-coding RNAs in model cyanobacteria |
| Q33941159 | Bulged residues promote the progression of a loop-loop interaction to a stable and inhibitory antisense-target RNA complex |
| Q40393044 | Bulged-out nucleotides in an antisense RNA are required for rapid target RNA binding in vitro and inhibition in vivo |
| Q40393036 | Bulged-out nucleotides protect an antisense RNA from RNase III cleavage |
| Q42673297 | Characterization and transcriptional regulation of the Synechocystis PCC 6803 petH gene, encoding ferredoxin-NADP+ oxidoreductase: involvement of a novel type of divergent operator |
| Q52550537 | Characterizing the structural features of RNA/RNA interactions of the F-plasmid FinOP fertility inhibition system. |
| Q33944576 | Chromatin remodelling during the life cycle of trypanosomatids. |
| Q33632186 | Chromatin-remodeling factors mediate the balance of sense-antisense transcription at the FGF2 locus |
| Q42620158 | Complete genome sequence of the Lactococcus lactis temperate phage phiLC3: comparative analysis of phiLC3 and its relatives in lactococci and streptococci |
| Q21145268 | Complex Loci in human and mouse genomes |
| Q39835952 | Control of transcription termination by an RNA factor in bacteriophage P4 immunity: identification of the target sites |
| Q40130460 | Controlled Expression of an rpoS Antisense RNA Can Inhibit RpoS Function in Escherichia coli |
| Q34363004 | Convergence of natural and artificial evolution on an RNA loop-loop interaction: the HIV-1 dimerization initiation site |
| Q33889444 | Copy number control of IncIalpha plasmid ColIb-P9 by competition between pseudoknot formation and antisense RNA binding at a specific RNA site |
| Q30672419 | DNA aptamers selected against the HIV-1 trans-activation-responsive RNA element form RNA-DNA kissing complexes |
| Q41064285 | Defining the enzyme binding domain of a ribonuclease III processing signal. Ethylation interference and hydroxyl radical footprinting using catalytically inactive RNase III mutants. |
| Q38089175 | Design and development of antisense drugs. |
| Q41257165 | Dimerization of retroviral genomic RNAs: structural and functional implications |
| Q41905494 | Discovery and characterization of the first non-coding RNA that regulates gene expression, micF RNA: A historical perspective |
| Q39718123 | Dissociation of long-chain duplex RNA can occur via strand displacement in vitro: biological implications |
| Q28269882 | Do natural antisense transcripts make sense in eukaryotes? |
| Q33906533 | Docking kinetics and equilibrium of a GAAA tetraloop-receptor motif probed by single-molecule FRET. |
| Q24645477 | DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcription |
| Q37202489 | EVOG: a database for evolutionary analysis of overlapping genes |
| Q28267834 | Engineered riboregulators enable post-transcriptional control of gene expression |
| Q34010329 | Escherichia coli and Salmonella 2000: the view from here |
| Q30666645 | Ethidium-dependent uncoupling of substrate binding and cleavage by Escherichia coli ribonuclease III |
| Q37388514 | Evidence for U-tail stabilization of gRNA/mRNA interactions in kinetoplastid RNA editing |
| Q24655847 | Evidence for a major role of antisense RNAs in cyanobacterial gene regulation |
| Q55405803 | Evolution and Diversity of Pre-mRNA Splicing in Highly Reduced Nucleomorph Genomes. |
| Q33575820 | Experimental identification and characterization of 97 novel npcRNA candidates in Salmonella enterica serovar Typhi |
| Q39827154 | Expression of an antisense hla fragment in Staphylococcus aureus reduces alpha-toxin production in vitro and attenuates lethal activity in a murine model |
| Q22011033 | Five members of a novel Ca(2+)-binding protein (CABP) subfamily with similarity to calmodulin |
| Q33661005 | Function, mechanism and regulation of bacterial ribonucleases |
| Q38161766 | Gene regulation by antisense transcription |
| Q47854053 | Gene-specific silencing by expression of parallel complementary RNA in Escherichia coli |
| Q34888345 | Genome-wide analyses in bacteria show small-RNA enrichment for long and conserved intergenic regions |
| Q35630476 | Genome-wide natural antisense transcription: coupling its regulation to its different regulatory mechanisms |
| Q21184167 | Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana |
| Q31073833 | Genomic analysis using conditional phenotypes generated by antisense RNA. |
| Q74192386 | High-efficiency silencing of a beta-glucuronidase gene in rice is correlated with repetitive transgene structure but is independent of DNA methylation |
| Q28756986 | Hitting bacteria at the heart of the central dogma: sequence-specific inhibition |
| Q41664166 | How rolling circle plasmids control their copy number |
| Q38928720 | Human cells contain natural double-stranded RNAs with potential regulatory functions |
| Q33280947 | Identification and detection of RNA-RNA interactions using the yeast RNA hybrid system |
| Q34206765 | Identification by cDNA cloning of abundant sRNAs in a human-avirulent Yersinia pestis strain grown under five different growth conditions |
| Q33603556 | Identification of Genes Controlled by the Essential YycFG Two-Component System Reveals a Role for Biofilm Modulation in Staphylococcus epidermidis |
| Q82906978 | Identification of antisense RNA stem-loops that inhibit RNA-protein interactions using a bacterial reporter system |
| Q21092872 | Identification of cyanobacterial non-coding RNAs by comparative genome analysis |
| Q33483666 | Identification of differentially expressed sense and antisense transcript pairs in breast epithelial tissues |
| Q30873582 | Identification of essential genes in Staphylococcus aureus using inducible antisense RNA. |
| Q54411459 | Identification of small noncoding RNAs in Helicobacter pylori by a bioinformatics-based approach. |
| Q24539007 | In silico discovery of human natural antisense transcripts |
| Q41184526 | In vitro and in vivo action of antisense RNA. |
| Q39543210 | In vitro selection supports the view of a kinetic control of antisense RNA-mediated inhibition of gene expression in mammalian cells. |
| Q22010391 | In vivo structure of two divergent promoters at the human PCNA locus. Synthesis of antisense RNA and S phase-dependent binding of E2F complexes in intron 1 |
| Q45080882 | Inhibition of Staphylococcus aureus gene expression and growth using antisense peptide nucleic acids |
| Q54426701 | Introduction to plasmid biology. |
| Q41637581 | Kinetic investigations by fluorescence correlation spectroscopy: the analytical and diagnostic potential of diffusion studies |
| Q33941792 | Kinetics and regulation of site-specific endonucleolytic cleavage of human IGF-II mRNAs |
| Q77734631 | Kissing and RNA stability in antisense control of plasmid replication |
| Q34364384 | Lead(II) as a probe for investigating RNA structure in vivo |
| Q26999388 | Long non-coding RNA-dependent transcriptional regulation in neuronal development and disease |
| Q38353392 | Loop swapping in an antisense RNA/target RNA pair changes directionality of helix progression |
| Q33368236 | Making (anti)sense of non-coding sequence conservation |
| Q38303211 | Masked antisense: a molecular configuration for discriminating similar RNA targets |
| Q42612850 | Mechanism of dimerization of bicoid mRNA: initiation and stabilization |
| Q64230205 | Mechanisms of Antisense Transcription Initiation with Implications in Gene Expression, Genomic Integrity and Disease Pathogenesis |
| Q30884437 | Molecular dynamics simulations of RNA kissing-loop motifs reveal structural dynamics and formation of cation-binding pockets |
| Q34669923 | Molecular simulation studies of monovalent counterion-mediated interactions in a model RNA kissing loop. |
| Q21266629 | Mouse ribonuclease III. cDNA structure, expression analysis, and chromosomal location |
| Q47859575 | Multiple S gene family members including natural antisense transcripts are differentially expressed during development of maize flowers |
| Q35128169 | NATsDB: Natural Antisense Transcripts DataBase |
| Q24794086 | NONCODE: an integrated knowledge database of non-coding RNAs |
| Q28207356 | Natural antisense (rTSalpha) RNA induces site-specific cleavage of thymidylate synthase mRNA |
| Q39325488 | Natural antisense RNAs as mRNA regulatory elements in bacteria: a review on function and applications |
| Q33915666 | Naturally occurring antisense: transcriptional leakage or real overlap? |
| Q78233884 | Neuronal expression of neural nitric oxide synthase (nNOS) protein is suppressed by an antisense RNA transcribed from an NOS pseudogene |
| Q34801141 | Non-coding ribonucleic acids--a class of their own? |
| Q26700139 | Novel Insights into Insect-Microbe Interactions-Role of Epigenomics and Small RNAs |
| Q28205853 | Novel small RNA-encoding genes in the intergenic regions of Escherichia coli |
| Q24564527 | Over 20% of human transcripts might form sense-antisense pairs |
| Q34844033 | Overexpression of the LexA-regulated tisAB RNA in E. coli inhibits SOS functions; implications for regulation of the SOS response |
| Q28472902 | Overlapping protein-encoding genes in Pseudomonas fluorescens Pf0-1 |
| Q74471536 | PNA, antisense, and antimicrobials |
| Q73793661 | Perfectly complementary nucleic acid enzymes |
| Q41952130 | Pervasive transcription: detecting functional RNAs in bacteria |
| Q33994582 | Plasmid copy number control: an ever-growing story |
| Q27937074 | Posttranscriptional control of gene expression in yeast. |
| Q34156056 | Precursor of C4 antisense RNA of bacteriophages P1 and P7 is a substrate for RNase P of Escherichia coli |
| Q41170399 | Prediction of candidate small non-coding RNAs in Agrobacterium by computational analysis |
| Q35630264 | Prediction of trans-antisense transcripts in Arabidopsis thaliana |
| Q34676099 | Progression of a loop-loop complex to a four-way junction is crucial for the activity of a regulatory antisense RNA |
| Q28469313 | Quantitative characteristics of gene regulation by small RNA |
| Q43827955 | RNA LEGO: magnesium-dependent formation of specific RNA assemblies through kissing interactions |
| Q35012331 | RNA loop-loop interactions as dynamic functional motifs. |
| Q24656891 | RNA misfolding and the action of chaperones |
| Q41288728 | RNA structure and the regulation of gene expression |
| Q36470934 | RNA synthetic biology |
| Q24603059 | Recognition and discrimination of target mRNAs by Sib RNAs, a cis-encoded sRNA family |
| Q31068991 | Reconstruction of the Regulatory Network for Bacillus subtilis and Reconciliation with Gene Expression Data |
| Q33993059 | Regulated antisense RNA eliminates alpha-toxin virulence in Staphylococcus aureus infection |
| Q41553601 | Regulation of gene expression by natural antisense RNA transcripts |
| Q34205029 | Regulatory circuits for plasmid survival |
| Q34295863 | Relatedness of chromosomal and plasmid DNAs of Erwinia pyrifoliae and Erwinia amylovora |
| Q39984813 | Relative gene-silencing efficiencies of small interfering RNAs targeting sense and antisense transcripts from the same genetic locus |
| Q39523346 | Replication and control of circular bacterial plasmids. |
| Q34428016 | Replication control of plasmid P1 and its host chromosome: the common ground. |
| Q36228436 | Requirement of upstream Hfq-binding (ARN)x elements in glmS and the Hfq C-terminal region for GlmS upregulation by sRNAs GlmZ and GlmY. |
| Q35107854 | Ribozymes: recent advances in the development of RNA tools |
| Q35981215 | Role of endogenous antisense RNA in cardiac gene regulation |
| Q35621413 | Role of the RepA1 protein in RepFIC plasmid replication |
| Q46979137 | Self-association of adenine-dependent hairpin ribozymes. |
| Q33369986 | Sense and antisense OsDof12 transcripts in rice |
| Q33281445 | SigmaE regulates and is regulated by a small RNA in Escherichia coli |
| Q47686883 | Small RNA profiling in Chlamydomonas: insights into chloroplast RNA metabolism |
| Q37303336 | Small RNAs establish gene expression thresholds |
| Q26852464 | Small RNAs, 5' UTR elements and RNA-binding proteins in intracellular bacteria: impact on metabolism and virulence |
| Q24674172 | Spot 42 RNA mediates discoordinate expression of the E. coli galactose operon |
| Q42648805 | Stable coexpression of a drug-resistance gene and a heterologous gene in an ancient parasitic protozoan Giardia lamblia |
| Q30487242 | Strand selective generation of endo-siRNAs from the Na/phosphate transporter gene Slc34a1 in murine tissues |
| Q36877024 | Strand-Specific RNA-Seq Provides Greater Resolution of Transcriptome Profiling. |
| Q34399095 | Strand-specific RNA-seq reveals ordered patterns of sense and antisense transcription in Bacillus anthracis |
| Q33940980 | Strand-specific deep sequencing of the transcriptome |
| Q74495145 | Structural basis for binding of the plasmid ColIb-P9 antisense Inc RNA to its target RNA with the 5'-rUUGGCG-3' motif in the loop sequence |
| Q40900469 | Structural characterization of an intermolecular RNA-RNA interaction involved in the transcription regulation element of a bipartite plant virus |
| Q34017427 | Switching on and off with RNA. |
| Q33958771 | Synthetic biology: applications come of age |
| Q40602487 | Systematic identification of sense-antisense transcripts in mammalian cells |
| Q38659215 | TectoRNA: modular assembly units for the construction of RNA nano-objects |
| Q36240637 | Temperature-dependent sRNA transcriptome of the Lyme disease spirochete |
| Q41107755 | The 5'-tail of antisense RNAII of pMV158 plays a critical role in binding to the target mRNA and in translation inhibition of repB. |
| Q38677249 | The Antisense Transcriptome and the Human Brain. |
| Q21735922 | The DNA sequence and comparative analysis of human chromosome 10 |
| Q24533360 | The Escherichia coli OxyS regulatory RNA represses fhlA translation by blocking ribosome binding |
| Q34120940 | The KLHL1-antisense transcript ( KLHL1AS) is evolutionarily conserved |
| Q64903086 | The Primary Antisense Transcriptome of Halobacterium salinarum NRC-1. |
| Q28242964 | The RNA Molecule CsrB Binds to the Global Regulatory Protein CsrA and Antagonizes Its Activity in Escherichia coli |
| Q30714929 | The abundance of sterile transcripts in Giardia lamblia. |
| Q21145045 | The challenge of regulation in a minimal photoautotroph: non-coding RNAs in Prochlorococcus |
| Q37612649 | The double-stranded transcriptome of Escherichia coli |
| Q38934221 | The entangled history of animal and plant microRNAs |
| Q34699680 | The evolution of collective restraint: policing and obedience among non-conjugative plasmids |
| Q34374266 | The expression of tubulin cofactor A (TBCA) is regulated by a noncoding antisense Tbca RNA during testis maturation. |
| Q33680892 | The impact of mRNA structure on guide RNA targeting in kinetoplastid RNA editing |
| Q40395913 | The influence of a metastable structure in plasmid primer RNA on antisense RNA binding kinetics |
| Q42603345 | The plasmid ColIb-P9 antisense Inc RNA controls expression of the RepZ replication protein and its positive regulator repY with different mechanisms |
| Q34211323 | The potential functions of primary microRNAs in target recognition and repression |
| Q40466955 | The potential of ribozymes as antiviral agents |
| Q34023373 | The sense of naturally transcribed antisense RNAs in plants |
| Q74109352 | Theoretical design of antisense RNA structures substantially improves annealing kinetics and efficacy in human cells |
| Q39543171 | Theoretical design of antisense genes with statistically increased efficacy |
| Q33936809 | Threshold effects in gene regulation: when some is not enough |
| Q90657919 | Trans-Acting Small RNAs and Their Effects on Gene Expression in Escherichia coli and Salmonella enterica |
| Q39837815 | Transcriptional analysis of rolling circle replicating plasmid pVT736-1: evidence for replication control by antisense RNA. |
| Q24671265 | Transcriptional interferences in cis natural antisense transcripts of humans and mice |
| Q24629334 | Transcriptome analysis of Pseudomonas syringae identifies new genes, noncoding RNAs, and antisense activity |
| Q33879789 | U-turns and regulatory RNAs |
| Q37548346 | Ultra deep sequencing of Listeria monocytogenes sRNA transcriptome revealed new antisense RNAs |
| Q28246401 | Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs |
| Q40211623 | Use of in vivo expression technology to identify genes important in growth and survival of Pseudomonas fluorescens Pf0-1 in soil: discovery of expressed sequences with novel genetic organization |
| Q36931479 | Using in-cell SHAPE-Seq and simulations to probe structure-function design principles of RNA transcriptional regulators. |
| Q35875342 | VapD in Xylella fastidiosa Is a Thermostable Protein with Ribonuclease Activity |
| Q45027877 | Viral escape from antisense RNA. |
| Q51243255 | Widespread anti-sense transcription in apple is correlated with siRNA production and indicates a large potential for transcriptional and/or post-transcriptional control. |
| Q29618539 | Widespread occurrence of antisense transcription in the human genome |
| Q37850790 | cis-antisense RNA, another level of gene regulation in bacteria. |
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