SigmaE regulates and is regulated by a small RNA in Escherichia coli

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SigmaE regulates and is regulated by a small RNA in Escherichia coli is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/JB.00020-07
P932PMC publication ID1913397
P698PubMed publication ID17416652

P50authorSusan GottesmanQ19642513
Karl M. ThompsonQ55755881
P2093author name stringVirgil A Rhodius
P2860cites workA small RNA regulates the expression of genes involved in iron metabolism in Escherichia coliQ24536169
Detection of 5'- and 3'-UTR-derived small RNAs and cis-encoded antisense RNAs in Escherichia coliQ24556624
Implication of membrane localization of target mRNA in the action of a small RNA: mechanism of post-transcriptional regulation of glucose transporter in Escherichia coliQ24557422
The small RNA, DsrA, is essential for the low temperature expression of RpoS during exponential growth in Escherichia coliQ24562141
Identification of novel small RNAs using comparative genomics and microarraysQ24601229
RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteriaQ24641843
DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcriptionQ24645477
SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decayQ24669800
Hfq modulates the sigmaE-mediated envelope stress response and the sigma32-mediated cytoplasmic stress response in Escherichia coliQ24680586
Antisense RNA control in bacteria, phages, and plasmidsQ40573014
Growth phase-dependent regulation of the extracytoplasmic stress factor, sigmaE, by guanosine 3',5'-bispyrophosphate (ppGpp).Q41668744
degS (hhoB) is an essential Escherichia coli gene whose indispensable function is to provide sigma (E) activityQ42506934
The sigmaE-mediated response to extracytoplasmic stress in Escherichia coli is transduced by RseA and RseB, two negative regulators of sigmaE.Q42656673
The activity of sigma 32 is reduced under conditions of excess heat shock protein production in Escherichia coliQ44527063
A coiled-coil from the RNA polymerase beta' subunit allosterically induces selective nontemplate strand binding by sigma(70).Q44819816
Hfq is essential for Vibrio cholerae virulence and downregulates sigma expressionQ47269170
Demonstration of molecular interactions between the murein polymerase PBP1B, the lytic transglycosylase MltA, and the scaffolding protein MipA of Escherichia coli.Q51605146
Mini-λ: a tractable system for chromosome and BAC engineeringQ51812826
Rapid amplification of uncharacterized transposon-tagged DNA sequences from genomic DNA.Q52524668
Transcription regulation of ompF and ompC by a single transcription factor, OmpR.Q54466860
The activity of sigma E, an Escherichia coli heat-inducible sigma-factor, is modulated by expression of outer membrane proteins.Q54647195
Regulation of the promoters and transcripts of rpoH, the Escherichia coli heat shock regulatory gene.Q54763507
Interaction of a transcriptional activator, OmpR, with reciprocally osmoregulated genes, ompF and ompC, of Escherichia coli.Q54771581
Tn7 transposes proximal to DNA double-strand breaks and into regions where chromosomal DNA replication terminatesQ64388355
Determination of intrinsic transcription termination efficiency by RNA polymerase elongation rateQ71658706
Evidence for two functional gal promoters in intact Escherichia coli cellsQ72912310
Assays for transcription factor activityQ73891600
Cell lysis directed by sigmaE in early stationary phase and effect of induction of the rpoE gene on global gene expression in Escherichia coliQ81002799
Down-regulation of porins by a small RNA bypasses the essentiality of the regulated intramembrane proteolysis protease RseP in Escherichia coliQ82713385
Sigma E controls biogenesis of the antisense RNA MicAQ24684061
Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coliQ24684800
EcoCyc: a comprehensive database resource for Escherichia coliQ24796847
Conserved and variable functions of the sigmaE stress response in related genomesQ24811266
A bioinformatics based approach to discover small RNA genes in the Escherichia coli genomeQ28205081
Novel small RNA-encoding genes in the intergenic regions of Escherichia coliQ28205853
Computational identification of noncoding RNAs in E. coli by comparative genomicsQ28216022
Conserved small non-coding RNAs that belong to the sigmaE regulon: role in down-regulation of outer membrane proteinsQ28265898
Remodelling of the Escherichia coli outer membrane by two small regulatory RNAsQ28287313
Involvement of a novel transcriptional activator and small RNA in post-transcriptional regulation of the glucose phosphoenolpyruvate phosphotransferase systemQ28291273
The E. coli signal recognition particle is required for the insertion of a subset of inner membrane proteinsQ28302083
The yjeB (nsrR) gene of Escherichia coli encodes a nitric oxide-sensitive transcriptional regulatorQ28768625
Improved single and multicopy lac-based cloning vectors for protein and operon fusionsQ29615296
The bacterial Sm-like protein Hfq: a key player in RNA transactionsQ29620062
Export-defective lamB protein is a target for translational control caused by ompC porin overexpressionQ30451901
Translational control of exported proteins that results from OmpC porin overexpressionQ30451910
Proteomic analysis of the Escherichia coli outer membrane.Q30870112
Regulation of proteolysis of the stationary-phase sigma factor RpoS.Q33725444
One-step preparation of competent Escherichia coli: transformation and storage of bacterial cells in the same solutionQ33846270
Small non-coding RNAs and the bacterial outer membraneQ34000397
OMP peptide signals initiate the envelope-stress response by activating DegS protease via relief of inhibition mediated by its PDZ domainQ34188699
rpoE, the gene encoding the second heat-shock sigma factor, sigma E, in Escherichia coli.Q34320811
Loss of Hfq activates the sigmaE-dependent envelope stress response in Salmonella entericaQ34568672
The response to extracytoplasmic stress in Escherichia coli is controlled by partially overlapping pathwaysQ35187415
The Escherichia coli sigma(E)-dependent extracytoplasmic stress response is controlled by the regulated proteolysis of an anti-sigma factorQ35206083
Identification and characterization of an outer membrane protein, OmpX, in Escherichia coli that is homologous to a family of outer membrane proteins including Ail of Yersinia enterocoliticaQ35579077
EmrR is a negative regulator of the Escherichia coli multidrug resistance pump EmrAB.Q35584121
Transduction of envelope stress in Escherichia coli by the Cpx two-component systemQ35634688
Analysis of the Streptomyces coelicolor sigE gene reveals the existence of a subfamily of eubacterial RNA polymerase sigma factors involved in the regulation of extracytoplasmic functionsQ35648817
Regulation of the Escherichia coli sigma-dependent envelope stress responseQ35752924
Relationship between the OmpC and LamB proteins of Escherichia coli and its influence on the protein mass of the outer membraneQ36311538
7 Uses of transposons with emphasis on Tn10Q36439570
The EmrR protein represses the Escherichia coli emrRAB multidrug resistance operon by directly binding to its promoter region.Q39475525
Function of the sigma(E) regulon in dead-cell lysis in stationary-phase Escherichia coliQ39500749
DegS and YaeL participate sequentially in the cleavage of RseA to activate the sigma(E)-dependent extracytoplasmic stress responseQ39860232
P433issue11
P407language of work or nameEnglishQ1860
P921main subjectEscherichia coliQ25419
P304page(s)4243-4256
P577publication date2007-04-06
P1433published inJournal of BacteriologyQ478419
P1476titleSigmaE regulates and is regulated by a small RNA in Escherichia coli
P478volume189

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cites work (P2860)
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