scholarly article | Q13442814 |
P50 | author | Jörg Vogel | Q1107809 |
Cynthia Sharma | Q22951263 | ||
Kai Papenfort | Q41716560 | ||
Marie Bouvier | Q58212055 | ||
P2093 | author name string | Franziska Mika | |
P2860 | cites work | Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq | Q21145046 |
Hfq-dependent regulation of OmpA synthesis is mediated by an antisense RNA. | Q24536474 | ||
Fast and effective prediction of microRNA/target duplexes | Q24537313 | ||
Translational repression is sufficient for gene silencing by bacterial small noncoding RNAs in the absence of mRNA destruction | Q24546344 | ||
MicC, a second small-RNA regulator of Omp protein expression in Escherichia coli | Q24563596 | ||
A unique mechanism regulating gene expression: translational inhibition by a complementary RNA transcript (micRNA) | Q24594977 | ||
Regulatory RNAs in bacteria | Q24595082 | ||
Reprogramming of anaerobic metabolism by the FnrS small RNA | Q24606364 | ||
MicroRNAs: target recognition and regulatory functions | Q24609584 | ||
MicA sRNA links the PhoP regulon to cell envelope stress | Q24629569 | ||
Two antisense RNAs target the transcriptional regulator CsgD to inhibit curli synthesis | Q24633959 | ||
Translational regulation of gene expression by an anaerobically induced small non-coding RNA in Escherichia coli | Q24634637 | ||
Small RNA-induced differential degradation of the polycistronic mRNA iscRSUA | Q24649054 | ||
The 5' end of two redundant sRNAs is involved in the regulation of multiple targets, including their own regulator | Q24653385 | ||
Most mammalian mRNAs are conserved targets of microRNAs | Q24655061 | ||
SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay | Q24669800 | ||
A small RNA regulates multiple ABC transporter mRNAs by targeting C/A-rich elements inside and upstream of ribosome-binding sites | Q24672099 | ||
Spot 42 RNA mediates discoordinate expression of the E. coli galactose operon | Q24674172 | ||
The RNA chaperone Hfq is essential for the virulence of Salmonella typhimurium | Q24683356 | ||
Sigma E controls biogenesis of the antisense RNA MicA | Q24684061 | ||
Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli | Q24684800 | ||
Translational control and target recognition by Escherichia coli small RNAs in vivo | Q24684847 | ||
Conserved and variable functions of the sigmaE stress response in related genomes | Q24811266 | ||
The path of messenger RNA through the ribosome | Q27634165 | ||
Global analysis of small RNA and mRNA targets of Hfq | Q28184898 | ||
Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation | Q28252581 | ||
Base-pairing requirement for RNA silencing by a bacterial small RNA and acceleration of duplex formation by Hfq | Q28253347 | ||
Conserved small non-coding RNAs that belong to the sigmaE regulon: role in down-regulation of outer membrane proteins | Q28265898 | ||
Effect of RyhB small RNA on global iron use in Escherichia coli | Q28275120 | ||
Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis | Q28275777 | ||
The small noncoding DsrA RNA is an acid resistance regulator in Escherichia coli | Q28280186 | ||
Control of Fur synthesis by the non-coding RNA RyhB and iron-responsive decoding | Q28286135 | ||
A rough guide to the non-coding RNA world of Salmonella | Q28300754 | ||
Small RNA binding to 5' mRNA coding region inhibits translational initiation | Q28305161 | ||
RNase E-based ribonucleoprotein complexes: mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs | Q29619938 | ||
The bacterial Sm-like protein Hfq: a key player in RNA transactions | Q29620062 | ||
SigmaE regulates and is regulated by a small RNA in Escherichia coli | Q33281445 | ||
Target identification of small noncoding RNAs in bacteria | Q34004747 | ||
Antisense RNAs in bacteria and their genetic elements | Q34121867 | ||
Regulatory mechanisms employed by cis-encoded antisense RNAs | Q34612437 | ||
Initiation of RNA decay in Escherichia coli by 5' pyrophosphate removal | Q36377532 | ||
Hfq structure, function and ligand binding | Q36774884 | ||
Multiple target regulation by small noncoding RNAs rewires gene expression at the post-transcriptional level | Q37444341 | ||
Promoter strength properties of the complete sigma E regulon of Escherichia coli and Salmonella enterica | Q37451484 | ||
Small RNA-mediated regulation at the level of transcript stability | Q37706896 | ||
mRNA helicase activity of the ribosome | Q38331986 | ||
Footprinting mRNA-ribosome complexes with chemical probes | Q40792928 | ||
Quantifying mRNA synthesis and decay rates using small RNAs | Q41005426 | ||
An antisense/target RNA duplex or a strong intramolecular RNA structure 5' of a translation initiation signal blocks ribosome binding: the case of plasmid R1. | Q41904047 | ||
A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutator | Q48047346 | ||
A small RNA downregulates LamB maltoporin in Salmonella | Q50070688 | ||
How the ribosome moves along the mRNA during protein synthesis. | Q53014507 | ||
A 5'-terminal stem-loop structure can stabilize mRNA in Escherichia coli | Q67531014 | ||
Secondary structures of Escherichia coli antisense micF RNA, the 5'-end of the target ompF mRNA, and the RNA/RNA duplex | Q71681327 | ||
The use of RNAs complementary to specific mRNAs to regulate the expression of individual bacterial genes | Q72732718 | ||
P433 | issue | 47 | |
P407 | language of work or name | English | Q1860 |
P304 | page(s) | 20435-40 | |
P577 | publication date | 2010-11-23 | |
P1433 | published in | Proceedings of the National Academy of Sciences of the United States of America | Q1146531 |
P1476 | title | Evidence for an autonomous 5' target recognition domain in an Hfq-associated small RNA | |
P478 | volume | 107 |
Q40119840 | A DIVA vaccine for cross-protection against Salmonella |
Q76319373 | A conserved RNA seed-pairing domain directs small RNA-mediated stress resistance in enterobacteria |
Q28255704 | A conserved RpoS-dependent small RNA controls the synthesis of major porin OmpD |
Q38841045 | A conserved α-proteobacterial small RNA contributes to osmoadaptation and symbiotic efficiency of rhizobia on legume roots. |
Q35036974 | A qrr noncoding RNA deploys four different regulatory mechanisms to optimize quorum-sensing dynamics. |
Q42883177 | A small RNA activates CFA synthase by isoform-specific mRNA stabilization |
Q28730090 | A survey of sRNA families in α-proteobacteria |
Q41229189 | Accessibility and conservation: general features of bacterial small RNA-mRNA interactions? |
Q42706878 | Accessibility and evolutionary conservation mark bacterial small-rna target-binding regions |
Q36172268 | Alternative Hfq-sRNA interaction modes dictate alternative mRNA recognition |
Q34033315 | An atlas of Hfq-bound transcripts reveals 3' UTRs as a genomic reservoir of regulatory small RNAs |
Q37916225 | Bacterial transcriptomics: what is beyond the RNA horiz-ome? |
Q34428226 | Cell-based assay to identify inhibitors of the Hfq-sRNA regulatory pathway. |
Q31151284 | Central role for RNase YbeY in Hfq-dependent and Hfq-independent small-RNA regulation in bacteria. |
Q24621557 | Comparative genomics boosts target prediction for bacterial small RNAs |
Q41516624 | Cross talk between ABC transporter mRNAs via a target mRNA-derived sponge of the GcvB small RNA |
Q36280099 | De novo automated design of small RNA circuits for engineering synthetic riboregulation in living cells |
Q34504665 | Differential expression of small RNAs under chemical stress and fed-batch fermentation in E. coli |
Q34005271 | Essential requirements for robust signaling in Hfq dependent small RNA networks |
Q43932569 | Experimental identification of small non-coding regulatory RNAs in the opportunistic human pathogen Burkholderia cenocepacia J2315. |
Q28490001 | Functional characterization of the type III secretion ATPase SsaN encoded by Salmonella pathogenicity island 2 |
Q37061489 | Functional determinants of the quorum-sensing non-coding RNAs and their roles in target regulation |
Q59789440 | Global discovery of small RNAs in the fish pathogen Edwardsiella piscicida: key regulator of adversity and pathogenicity |
Q29615791 | Hfq and its constellation of RNA |
Q37015883 | Hfq assists small RNAs in binding to the coding sequence of ompD mRNA and in rearranging its structure |
Q57260318 | Hfq chaperone brings speed dating to bacterial sRNA |
Q38674091 | Hfq: a multifaceted RNA chaperone involved in virulence |
Q57030072 | High-throughput in vivo mapping of RNA accessible interfaces to identify functional sRNA binding sites |
Q92709550 | High-throughput screen reveals sRNAs regulating crRNA biogenesis by targeting CRISPR leader to repress Rho termination |
Q35620619 | How do base-pairing small RNAs evolve? |
Q34470763 | Identification of a Novel Small Non-Coding RNA Modulating the Intracellular Survival of Brucella melitensis |
Q36337696 | Identification of bacterial sRNA regulatory targets using ribosome profiling. |
Q34740470 | Identifying and characterizing Hfq-RNA interactions |
Q47102732 | Impact of bacterial sRNAs in stress responses. |
Q57039543 | In silico 'fishing' using known small regulatory RNA (sRNA) candidates as the decoy from Escherichia coli, Salmonella typhi and Salmonella typhimurium manifested 14 novel sRNA candidates in the orthologous region of Proteus mirabilis |
Q34837547 | Independent activity of the homologous small regulatory RNAs AbcR1 and AbcR2 in the legume symbiont Sinorhizobium meliloti. |
Q38602982 | Intermolecular base stacking mediates RNA-RNA interaction in a crystal structure of the RNA chaperone Hfq. |
Q38846031 | Interplay of regulatory RNAs and mobile genetic elements in enteric pathogens |
Q38969993 | Mechanistic study of base-pairing small regulatory RNAs in bacteria. |
Q28244052 | MicL, a new σE-dependent sRNA, combats envelope stress by repressing synthesis of Lpp, the major outer membrane lipoprotein |
Q34395461 | Multi-target regulation by small RNAs synchronizes gene expression thresholds and may enhance ultrasensitive behavior |
Q35931768 | Multiple factors dictate target selection by Hfq-binding small RNAs |
Q24620084 | NAPP: the Nucleic Acid Phylogenetic Profile Database |
Q40285241 | Neisseria meningitidis Uses Sibling Small Regulatory RNAs To Switch from Cataplerotic to Anaplerotic Metabolism |
Q28263595 | Noncanonical repression of translation initiation through small RNA recruitment of the RNA chaperone Hfq |
Q43576806 | Pervasive post-transcriptional control of genes involved in amino acid metabolism by the Hfq-dependent GcvB small RNA. |
Q31066145 | Phylogenetic distribution and evolutionary pattern of an α-proteobacterial small RNA gene that controls polyhydroxybutyrate accumulation in Sinorhizobium meliloti |
Q21144899 | Post-transcriptional control of the Escherichia coli PhoQ-PhoP two-component system by multiple sRNAs involves a novel pairing region of GcvB |
Q35683145 | Quorum-sensing non-coding small RNAs use unique pairing regions to differentially control mRNA targets. |
Q54253141 | RETRACTED: A small non-coding RNA AbcR2 regulate gntR transcription factor that modulate the intracellular survival of Brucella melitensis. |
Q38211777 | RNA binding by Hfq and ring-forming (L)Sm proteins: a trade-off between optimal sequence readout and RNA backbone conformation |
Q89975694 | RNA-Sequencing Analyses of Small Bacterial RNAs and their Emergence as Virulence Factors in Host-Pathogen Interactions |
Q39135511 | RNA-based recognition and targeting: sowing the seeds of specificity |
Q103027678 | RNA-mediated control of cell shape modulates antibiotic resistance in Vibrio cholerae |
Q37122347 | RNA-mediated regulation in pathogenic bacteria |
Q46091999 | Rationally designed families of orthogonal RNA regulators of translation |
Q35111238 | Recognition of the small regulatory RNA RydC by the bacterial Hfq protein |
Q27009044 | Regulation by small RNAs in bacteria: expanding frontiers |
Q40047509 | Regulation of Neisseria meningitidis cytochrome bc1 components by NrrF, a Fur-controlled small noncoding RNA. |
Q38103937 | Regulation of pathogenicity by noncoding RNAs in bacteria |
Q26766030 | Role of Small Noncoding RNAs in Bacterial Metabolism |
Q40624537 | RpoS-dependent sRNA RgsA regulates Fis and AcpP in Pseudomonas aeruginosa. |
Q28727846 | Small RNA binding to the lateral surface of Hfq hexamers and structural rearrangements upon mRNA target recognition |
Q38235406 | Small RNA functions in carbon metabolism and virulence of enteric pathogens |
Q28284168 | Small RNA modules confer different stabilities and interact differently with multiple targets |
Q28243536 | Small RNAs endow a transcriptional activator with essential repressor functions for single-tier control of a global stress regulon |
Q27670724 | Structural basis for RNA 3'-end recognition by Hfq |
Q38093756 | Structure and RNA-binding properties of the bacterial LSm protein Hfq. |
Q40028342 | Superfolder GFP reporters validate diverse new mRNA targets of the classic porin regulator, MicF RNA. |
Q89185622 | Synthetic Biology of Small RNAs and Riboswitches |
Q44821305 | Target evaluation of the non-coding csRNAs reveals a link of the two-component regulatory system CiaRH to competence control in Streptococcus pneumoniae R6. |
Q31145113 | The Clostridium small RNome that responds to stress: the paradigm and importance of toxic metabolite stress in C. acetobutylicum |
Q36191630 | The VrrA sRNA controls a stationary phase survival factor Vrp of Vibrio cholerae |
Q24606909 | The ZorO-OrzO type I toxin-antitoxin locus: repression by the OrzO antitoxin |
Q35882335 | The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pair |
Q37995707 | The bacterial protein Hfq: much more than a mere RNA-binding factor |
Q36189994 | The multicopy sRNA LhrC controls expression of the oligopeptide-binding protein OppA in Listeria monocytogenes |
Q33741128 | The primary transcriptome of Neisseria meningitidis and its interaction with the RNA chaperone Hfq. |
Q21133532 | The sRNA RyhB regulates the synthesis of the Escherichia coli methionine sulfoxide reductase MsrB but not MsrA |
Q42428502 | The seed region of a small RNA drives the controlled destruction of the target mRNA by the endoribonuclease RNase E. |
Q28972220 | The social fabric of the RNA degradosome |
Q24634946 | The structure of a tetrahydrofolate-sensing riboswitch reveals two ligand binding sites in a single aptamer |
Q28277062 | The target spectrum of SdsR small RNA in Salmonella |
Q90657919 | Trans-Acting Small RNAs and Their Effects on Gene Expression in Escherichia coli and Salmonella enterica |
Q34501223 | Transcriptome-Wide Identification of Hfq-Associated RNAs in Brucella suis by Deep Sequencing |
Q28710534 | Transcriptomic profiling of the oyster pathogen Vibrio splendidus opens a window on the evolutionary dynamics of the small RNA repertoire in the Vibrio genus |
Q37051423 | Twins, quadruplexes, and more: functional aspects of native and engineered RNA self-assembly in vivo |
Q42665602 | Two separate modules of the conserved regulatory RNA AbcR1 address multiple target mRNAs in and outside of the translation initiation region. |
Q30017317 | sRNA154 a newly identified regulator of nitrogen fixation in Methanosarcina mazei strain Gö1 |
Q24597091 | sRNAs and the virulence of Salmonella enterica serovar Typhimurium |
Search more.