scholarly article | Q13442814 |
P50 | author | Kathrin S Fröhlich | Q58211935 |
Jörg Vogel | Q1107809 | ||
Kai Papenfort | Q41716560 | ||
P2093 | author name string | Allison A Berger | |
P2860 | cites work | Porin biogenesis activates the sigma(E) response in Salmonella hfq mutants | Q50060988 |
Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq | Q21145046 | ||
A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli | Q24536169 | ||
Fast and effective prediction of microRNA/target duplexes | Q24537313 | ||
Target prediction for small, noncoding RNAs in bacteria | Q24544245 | ||
The small RNA, DsrA, is essential for the low temperature expression of RpoS during exponential growth in Escherichia coli | Q24562141 | ||
GadY, a small-RNA regulator of acid response genes in Escherichia coli | Q24563573 | ||
MicC, a second small-RNA regulator of Omp protein expression in Escherichia coli | Q24563596 | ||
The small RNA SgrS controls sugar-phosphate accumulation by regulating multiple PTS genes | Q24598644 | ||
Identification of novel small RNAs using comparative genomics and microarrays | Q24601229 | ||
Reprogramming of anaerobic metabolism by the FnrS small RNA | Q24606364 | ||
The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli | Q24622607 | ||
The cellular concentration of the sigma S subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stability | Q54631609 | ||
Residual guanosine 3',5'-bispyrophosphate synthetic activity of relA null mutants can be eliminated by spoT null mutations | Q70119536 | ||
Escherichia coli ppGpp synthetase II activity requires spoT | Q70119540 | ||
Hyperosmotic shock induces the sigma32 and sigmaE stress regulons of Escherichia coli | Q73265531 | ||
RpoS-dependent promoters require guanosine tetraphosphate for induction even in the presence of high levels of sigma(s) | Q73626179 | ||
fhlA repression by OxyS RNA: kissing complex formation at two sites results in a stable antisense-target RNA complex | Q74027600 | ||
Promoter recognition and discrimination by EsigmaS RNA polymerase | Q77333834 | ||
Down-regulation of porins by a small RNA bypasses the essentiality of the regulated intramembrane proteolysis protease RseP in Escherichia coli | Q82713385 | ||
Translational regulation of gene expression by an anaerobically induced small non-coding RNA in Escherichia coli | Q24634637 | ||
RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteria | Q24641843 | ||
Small RNAs encoded within genetic islands of Salmonella typhimurium show host-induced expression and role in virulence | Q24641915 | ||
Efficient translation of the RpoS sigma factor in Salmonella typhimurium requires host factor I, an RNA-binding protein encoded by the hfq gene | Q24643457 | ||
DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcription | Q24645477 | ||
Riboregulation in Escherichia coli: DsrA RNA acts by RNA:RNA interactions at multiple loci | Q24645507 | ||
A new Vibrio cholerae sRNA modulates colonization and affects release of outer membrane vesicles | Q24647335 | ||
Caught at its own game: regulatory small RNA inactivated by an inducible transcript mimicking its target | Q24647466 | ||
SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay | Q24669800 | ||
The RNA chaperone Hfq is essential for the virulence of Salmonella typhimurium | Q24683356 | ||
A survey of small RNA-encoding genes in Escherichia coli | Q24684021 | ||
Sigma E controls biogenesis of the antisense RNA MicA | Q24684061 | ||
Translational control and target recognition by Escherichia coli small RNAs in vivo | Q24684847 | ||
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products | Q27860842 | ||
Identification of a central regulator of stationary-phase gene expression inEscherichia coli | Q27976519 | ||
Global analysis of small RNA and mRNA targets of Hfq | Q28184898 | ||
Regulation of RpoS by a novel small RNA: the characterization of RprA | Q28204998 | ||
A bioinformatics based approach to discover small RNA genes in the Escherichia coli genome | Q28205081 | ||
Novel small RNA-encoding genes in the intergenic regions of Escherichia coli | Q28205853 | ||
Computational identification of noncoding RNAs in E. coli by comparative genomics | Q28216022 | ||
Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase | Q28220384 | ||
Small RNAs endow a transcriptional activator with essential repressor functions for single-tier control of a global stress regulon | Q28243536 | ||
A conserved small RNA promotes discoordinate expression of the glmUS operon mRNA to activate GlmS synthesis | Q28248562 | ||
Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation | Q28252581 | ||
Micros for microbes: non-coding regulatory RNAs in bacteria | Q28252632 | ||
Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNA | Q28257497 | ||
Conserved small non-coding RNAs that belong to the sigmaE regulon: role in down-regulation of outer membrane proteins | Q28265898 | ||
Effect of RyhB small RNA on global iron use in Escherichia coli | Q28275120 | ||
Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis | Q28275777 | ||
Integrating anaerobic/aerobic sensing and the general stress response through the ArcZ small RNA | Q28289704 | ||
Recognition of heptameric seed sequence underlies multi-target regulation by RybB small RNA in Salmonella enterica | Q28296796 | ||
Evidence for an autonomous 5' target recognition domain in an Hfq-associated small RNA | Q28297881 | ||
Small RNA binding to 5' mRNA coding region inhibits translational initiation | Q28305161 | ||
Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant | Q29615039 | ||
Hfq and its constellation of RNA | Q29615791 | ||
Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements | Q29615996 | ||
RNase E-based ribonucleoprotein complexes: mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs | Q29619938 | ||
Comparison of outer membrane porin proteins produced by Escherichia coli and Salmonella typhimurium | Q30451431 | ||
Evidence that the outer membrane protein gene nmpC of Escherichia coli K-12 lies within the defective qsr' prophage. | Q30451943 | ||
SigmaE regulates and is regulated by a small RNA in Escherichia coli | Q33281445 | ||
Small RNAs in Escherichia coli. | Q33539353 | ||
Interplay of global regulators and cell physiology in the general stress response of Escherichia coli | Q33632476 | ||
Identification and characterization of two quiescent porin genes, nmpC and ompN, in Escherichia coli BE. | Q33732525 | ||
A PhoQ/P-regulated small RNA regulates sensitivity of Escherichia coli to antimicrobial peptides | Q33738360 | ||
Isolation, genetic mapping and some characterization of a mutation in Escherichia coli that affects the processing of ribonuleic acid | Q33993212 | ||
Small non-coding RNAs and the bacterial outer membrane | Q34000397 | ||
Positive regulation by small RNAs and the role of Hfq | Q34006620 | ||
Base pairing small RNAs and their roles in global regulatory networks | Q34061171 | ||
Acid stress activation of the sigma(E) stress response in Salmonella enterica serovar Typhimurium. | Q34147553 | ||
The RpoS-mediated general stress response in Escherichia coli | Q34189650 | ||
Novel mechanism of Escherichia coli porin regulation | Q34303232 | ||
rpoE, the gene encoding the second heat-shock sigma factor, sigma E, in Escherichia coli. | Q34320811 | ||
The RNA-binding protein HF-I, known as a host factor for phage Qbeta RNA replication, is essential for rpoS translation in Escherichia coli | Q34383062 | ||
Loss of Hfq activates the sigmaE-dependent envelope stress response in Salmonella enterica | Q34568672 | ||
A small non-coding RNA of the invasion gene island (SPI-1) represses outer membrane protein synthesis from the Salmonella core genome | Q34707860 | ||
Deep sequencing of Salmonella RNA associated with heterologous Hfq proteins in vivo reveals small RNAs as a major target class and identifies RNA processing phenotypes | Q34971662 | ||
Antisense RNAs in plasmids: control of replication and maintenance | Q35013448 | ||
In vitro transcription profiling of the σS subunit of bacterial RNA polymerase: re-definition of the σS regulon and identification of σS-specific promoter sequence elements | Q35120775 | ||
Stationary-phase physiology | Q35919834 | ||
Global regulation of the Salmonella enterica serovar typhimurium major porin, OmpD | Q35924391 | ||
Modulating the outer membrane with small RNAs | Q36584942 | ||
Insertion hot spot for horizontally acquired DNA within a bidirectional small-RNA locus in Salmonella enterica. | Q36672919 | ||
The molecular basis of selective promoter activation by the sigmaS subunit of RNA polymerase. | Q36736448 | ||
Small RNAs controlling outer membrane porins | Q36763357 | ||
The Crp-activated small noncoding regulatory RNA CyaR (RyeE) links nutritional status to group behavior | Q37051352 | ||
Promoter strength properties of the complete sigma E regulon of Escherichia coli and Salmonella enterica | Q37451484 | ||
Computational prediction of sRNAs and their targets in bacteria. | Q37671500 | ||
The role of Hfq in bacterial pathogens | Q37676558 | ||
The rpoE gene encoding the sigma E (sigma 24) heat shock sigma factor of Escherichia coli. | Q37694796 | ||
Stationary phase in gram-negative bacteria. | Q37710717 | ||
mRNA helicase activity of the ribosome | Q38331986 | ||
Comparison of DeltarelA strains of Escherichia coli and Salmonella enterica serovar Typhimurium suggests a role for ppGpp in attenuation regulation of branched-chain amino acid biosynthesis | Q39529660 | ||
Heat shock regulation of sigmaS turnover: a role for DnaK and relationship between stress responses mediated by sigmaS and sigma32 in Escherichia coli | Q39844060 | ||
Antisense RNA control in bacteria, phages, and plasmids | Q40573014 | ||
Shigella flexneri induces apoptosis in infected macrophages | Q41614246 | ||
Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity | Q41863185 | ||
Small RNA-induced mRNA degradation achieved through both translation block and activated cleavage | Q41912798 | ||
What makes an Escherichia coli promoter sigma(S) dependent? Role of the -13/-14 nucleotide promoter positions and region 2.5 of sigma(S). | Q43544098 | ||
Pervasive post-transcriptional control of genes involved in amino acid metabolism by the Hfq-dependent GcvB small RNA. | Q43576806 | ||
Limiting factors in Escherichia coli fed-batch production of recombinant proteins. | Q44229041 | ||
Down-regulation of outer membrane proteins by noncoding RNAs: unraveling the cAMP-CRP- and sigmaE-dependent CyaR-ompX regulatory case. | Q45958746 | ||
Open complex formation in vitro by sigma38 (rpoS) RNA polymerase: roles for region 2 amino acids. | Q46019343 | ||
A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutator | Q48047346 | ||
Construction of targeted single copy lac fusions using lambda Red and FLP-mediated site-specific recombination in bacteria | Q48298401 | ||
P275 | copyright license | Creative Commons Attribution-NonCommercial 3.0 Unported | Q18810331 |
P6216 | copyright status | copyrighted | Q50423863 |
P4510 | describes a project that uses | ImageQuant | Q112270642 |
P433 | issue | 8 | |
P407 | language of work or name | English | Q1860 |
P304 | page(s) | 3623-40 | |
P577 | publication date | 2012-04-01 | |
P1433 | published in | Nucleic Acids Research | Q135122 |
P1476 | title | A conserved RpoS-dependent small RNA controls the synthesis of major porin OmpD | |
P478 | volume | 40 |
Q34296188 | A complex network of small non-coding RNAs regulate motility in Escherichia coli |
Q42883177 | A small RNA activates CFA synthase by isoform-specific mRNA stabilization |
Q48194060 | Alternative pathways for Escherichia coli biofilm formation revealed by sRNA overproduction. |
Q42132536 | An RpoS-dependent sRNA regulates the expression of a chaperone involved in protein folding |
Q34033315 | An atlas of Hfq-bound transcripts reveals 3' UTRs as a genomic reservoir of regulatory small RNAs |
Q24284893 | BSRD: a repository for bacterial small regulatory RNA |
Q52659752 | Bacterial Adaptation to Antibiotics through Regulatory RNAs. |
Q27008535 | Bacterial Responses and Genome Instability Induced by Subinhibitory Concentrations of Antibiotics |
Q37480965 | Canonical and non-canonical EcfG sigma factors control the general stress response in Rhizobium etli |
Q35659418 | Characterization of the Escherichia coli σ(S) core regulon by Chromatin Immunoprecipitation-sequencing (ChIP-seq) analysis |
Q41955064 | Comparative transcriptomics of two environmentally relevant cyanobacteria reveals unexpected transcriptome diversity |
Q92239013 | Competitive Repression of the artPIQM Operon for Arginine and Ornithine Transport by Arginine Repressor and Leucine-Responsive Regulatory Protein in Escherichia coli |
Q91594621 | Coordinate regulation of the expression of SdsR toxin and its downstream pphA gene by RyeA antitoxin in Escherichia coli |
Q47147972 | Dual Regulation of the Small RNA MicC and the Quiescent Porin OmpN in Response to Antibiotic Stress in Escherichia coli |
Q33584235 | Expanding the RpoS/σS-network by RNA sequencing and identification of σS-controlled small RNAs in Salmonella |
Q55000737 | GLASSgo - Automated and Reliable Detection of sRNA Homologs From a Single Input Sequence. |
Q90753044 | Grad-seq in a Gram-positive bacterium reveals exonucleolytic sRNA activation in competence control |
Q50030594 | Hfq and Hfq-dependent small RNAs are major contributors to multicellular development in Salmonella enterica serovar Typhimurium |
Q37015883 | Hfq assists small RNAs in binding to the coding sequence of ompD mRNA and in rearranging its structure |
Q47104096 | Hfq links translation repression to stress-induced mutagenesis in E. coli |
Q35620619 | How do base-pairing small RNAs evolve? |
Q34342486 | Identification and characterization of a cis-encoded antisense RNA associated with the replication process of Salmonella enterica serovar Typhi |
Q36337696 | Identification of bacterial sRNA regulatory targets using ribosome profiling. |
Q36164568 | Identification of novel sRNAs involved in biofilm formation, motility, and fimbriae formation in Escherichia coli |
Q34740470 | Identifying and characterizing Hfq-RNA interactions |
Q38846031 | Interplay of regulatory RNAs and mobile genetic elements in enteric pathogens |
Q38199289 | Ménage à trois: post-transcriptional control of the key enzyme for cell envelope synthesis by a base-pairing small RNA, an RNase adaptor protein, and a small RNA mimic |
Q37373617 | OprD Repression upon Metal Treatment Requires the RNA Chaperone Hfq in Pseudomonas aeruginosa |
Q92867207 | Outer Membrane Porins |
Q34526027 | Protection against deleterious nitrogen compounds: role of σS-dependent small RNAs encoded adjacent to sdiA. |
Q33704735 | Proteome remodelling by the stress sigma factor RpoS/σS in Salmonella: identification of small proteins and evidence for post-transcriptional regulation. |
Q35111238 | Recognition of the small regulatory RNA RydC by the bacterial Hfq protein |
Q35088972 | Repressor activity of the RpoS/σS-dependent RNA polymerase requires DNA binding |
Q90379817 | Resistance Profiles of Salmonella Isolates Exposed to Stresses and the Expression of Small Non-coding RNAs |
Q26766030 | Role of Small Noncoding RNAs in Bacterial Metabolism |
Q40624537 | RpoS-dependent sRNA RgsA regulates Fis and AcpP in Pseudomonas aeruginosa. |
Q36176282 | Small Open Reading Frames, Non-Coding RNAs and Repetitive Elements in Bradyrhizobium japonicum USDA 110. |
Q36709429 | Small RNA Regulation of TolC, the Outer Membrane Component of Bacterial Multidrug Transporters |
Q38235406 | Small RNA functions in carbon metabolism and virulence of enteric pathogens |
Q36008348 | Small RNA-based feedforward loop with AND-gate logic regulates extrachromosomal DNA transfer in Salmonella |
Q38062239 | Small RNAs and their role in biofilm formation |
Q38230079 | Small RNAs in the control of RpoS, CsgD, and biofilm architecture of Escherichia coli |
Q41295271 | Small RNAs regulating biofilm formation and outer membrane homeostasis |
Q38084831 | Small Regulatory RNAs in the Control of Motility and Biofilm Formation in E. coli and Salmonella |
Q35549117 | Stress sigma factor RpoS degradation and translation are sensitive to the state of central metabolism |
Q40028342 | Superfolder GFP reporters validate diverse new mRNA targets of the classic porin regulator, MicF RNA. |
Q36114219 | The Impact of 18 Ancestral and Horizontally-Acquired Regulatory Proteins upon the Transcriptome and sRNA Landscape of Salmonella enterica serovar Typhimurium. |
Q92167406 | The conserved 3' UTR-derived small RNA NarS mediates mRNA crossregulation during nitrate respiration |
Q54340513 | The csgD mRNA as a hub for signal integration via multiple small RNAs. |
Q44674694 | The excludon: a new concept in bacterial antisense RNA-mediated gene regulation |
Q90329861 | The fitness landscape of the African Salmonella Typhimurium ST313 strain D23580 reveals unique properties of the pBT1 plasmid |
Q47945575 | The novel sRNA s015 improves nisin yield by increasing acid tolerance of Lactococcus lactis F44. |
Q33741128 | The primary transcriptome of Neisseria meningitidis and its interaction with the RNA chaperone Hfq. |
Q35130307 | The primary transcriptome of Salmonella enterica Serovar Typhimurium and its dependence on ppGpp during late stationary phase |
Q92998597 | The sRNA DicF integrates oxygen sensing to enhance enterohemorrhagic Escherichia coli virulence via distinctive RNA control mechanisms |
Q42428502 | The seed region of a small RNA drives the controlled destruction of the target mRNA by the endoribonuclease RNase E. |
Q57183085 | The small RNA, SdsR, acts as a novel type of toxin in Escherichia coli |
Q57059731 | The small protein MgtS and small RNA MgrR modulate the PitA phosphate symporter to boost intracellular magnesium levels |
Q28277062 | The target spectrum of SdsR small RNA in Salmonella |
Q42600827 | Tn5 transposition in Escherichia coli is repressed by Hfq and activated by over-expression of the small non-coding RNA SgrS. |
Q90657919 | Trans-Acting Small RNAs and Their Effects on Gene Expression in Escherichia coli and Salmonella enterica |
Q42665602 | Two separate modules of the conserved regulatory RNA AbcR1 address multiple target mRNAs in and outside of the translation initiation region. |
Q64272263 | mRNA dynamics and alternative conformations adopted under low and high arginine concentrations control polyamine biosynthesis in Salmonella |
Q28277943 | ncRNAs and thermoregulation: a view in prokaryotes and eukaryotes |
Q89965156 | sRNA scr5239 Involved in Feedback Loop Regulation of Streptomyces coelicolor Central Metabolism |
Q30017317 | sRNA154 a newly identified regulator of nitrogen fixation in Methanosarcina mazei strain Gö1 |
Q24597091 | sRNAs and the virulence of Salmonella enterica serovar Typhimurium |
Q36737307 | β-Lactam antibiotics promote bacterial mutagenesis via an RpoS-mediated reduction in replication fidelity |
Search more.