Interplay of global regulators and cell physiology in the general stress response of Escherichia coli

scientific article

Interplay of global regulators and cell physiology in the general stress response of Escherichia coli is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

External links are
P356DOI10.1016/S1369-5274(99)80026-5
P698PubMed publication ID10322169

P2093author name stringHengge-Aronis R
P2860cites workThe small RNA, DsrA, is essential for the low temperature expression of RpoS during exponential growth in Escherichia coliQ24562141
Efficient translation of the RpoS sigma factor in Salmonella typhimurium requires host factor I, an RNA-binding protein encoded by the hfq geneQ24643457
Identification of a central regulator of stationary-phase gene expression inEscherichia coliQ27976519
Cloning, mapping and nucleotide sequencing of a gene encoding a universal stress protein in Escherichia coliQ31009576
The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) proteinQ33889724
The RNA-binding protein HF-I, known as a host factor for phage Qbeta RNA replication, is essential for rpoS translation in Escherichia coliQ34383062
Promoter determinants for Escherichia coli RNA polymerase holoenzyme containing sigma 38 (the rpoS gene product)Q34740808
Promoter selectivity of the stationary-phase forms of Escherichia coli RNA polymerase and conversion in vitro of the S1 form enzyme into a log-phase enzyme like formQ35011991
Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli: intracellular levels of sigma 70 and sigma 38Q35599258
Acid shock induction of RpoS is mediated by the mouse virulence gene mviA of Salmonella typhimuriumQ35606490
Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli: intracellular levels of four species of sigma subunit under various growth conditionsQ35613001
Stimulatory effect of trehalose on formation and activity of Escherichia coli RNA polymerase E sigma38 holoenzymeQ35623963
Negative regulation of mutS and mutH repair gene expression by the Hfq and RpoS global regulators of Escherichia coli K-12.Q35633546
Complex transcriptional control of the sigma s-dependent stationary-phase-induced and osmotically regulated osmY (csi-5) gene suggests novel roles for Lrp, cyclic AMP (cAMP) receptor protein-cAMP complex, and integration host factor in the stationarQ38313804
Negative regulation by RpoS: a case of sigma factor competitionQ38332573
Role for the histone-like protein H-NS in growth phase-dependent and osmotic regulation of sigma S and many sigma S-dependent genes in Escherichia coliQ39474355
Trehalose is not relevant for in vivo activity of sigmaS-containing RNA polymerase in Escherichia coliQ39565161
Regulation of Escherichia coli starvation sigma factor (sigma s) by ClpXP proteaseQ39839940
Posttranscriptional osmotic regulation of the sigma(s) subunit of RNA polymerase in Escherichia coliQ39840619
Heat shock regulation of sigmaS turnover: a role for DnaK and relationship between stress responses mediated by sigmaS and sigma32 in Escherichia coliQ39844060
Mutations that increase expression of the rpoS gene and decrease its dependence on hfq function in Salmonella typhimuriumQ39844182
Stationary-phase-inducible "gearbox" promoters: differential effects of katF mutations and role of sigma 70Q39942395
Quantitative control of the stationary phase-specific sigma factor, sigma S, in Escherichia coli: involvement of the nucleoid protein H-NS.Q40805693
The response regulator RssB controls stability of the sigma(S) subunit of RNA polymerase in Escherichia coli.Q41064227
Back to log phase: sigma S as a global regulator in the osmotic control of gene expression in Escherichia coliQ41181646
Molecular analysis of the regulation of csiD, a carbon starvation-inducible gene in Escherichia coli that is exclusively dependent on sigma s and requires activation by cAMP-CRP.Q42674368
The dps promoter is activated by OxyR during growth and by IHF and σs in stationary phaseQ47673138
Interplay between global regulators of Escherichia coli: effect of RpoS, Lrp and H-NS on transcription of the gene osmC.Q47848431
Activation of RpoS-dependent proP P2 transcription by the Fis protein in vitro.Q54562014
Role of rpoS regulon in resistance to oxidative stress and near-UV radiation in delta oxyR suppressor mutants of Escherichia coli.Q54573448
Promoter selectivity of Escherichia coli RNA polymerase E sigma 70 and E sigma 38 holoenzymes. Effect of DNA supercoiling.Q54595034
Sigma S-dependent growth-phase induction of the csgBA promoter in Escherichia coli can be achieved in vivo by sigma 70 in the absence of the nucleoid-associated protein H-NS.Q54628054
The cellular concentration of the sigma S subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stabilityQ54631609
Promoter selectivity control of Escherichia coli RNA polymerase by ionic strength: differential recognition of osmoregulated promoters by E sigma D and E sigma S holoenzymesQ71521351
The leucine-responsive regulatory protein (Lrp) acts as a specific repressor for sigma s-dependent transcription of the Escherichia coli aidB geneQ71538829
Mode of promoter recognition by the Escherichia coli RNA polymerase holoenzyme containing the sigma S subunit: identification of the recognition sequence of the fic promoterQ71575648
Role of rpoS (katF) in oxyR-independent regulation of hydroperoxidase I in Escherichia coliQ72738309
Functional interaction of Escherichia coli RNA polymerase with inorganic polyphosphateQ73874072
PDZ-like domains mediate binding specificity in the Clp/Hsp100 family of chaperones and protease regulatory subunitsQ74037500
Regulation of RssB-dependent proteolysis in Escherichia coli: a role for acetyl phosphate in a response regulator-controlled processQ74355686
Crl stimulates RpoS activity during stationary phaseQ77394597
P433issue2
P921main subjectphysiologyQ521
Escherichia coliQ25419
P304page(s)148-152
P577publication date1999-04-01
P1433published inCurrent Opinion in MicrobiologyQ15752444
P1476titleInterplay of global regulators and cell physiology in the general stress response of Escherichia coli
P478volume2

Reverse relations

cites work (P2860)
Q281406516S RNA regulates E. coli RNA polymerase activity
Q35544861A Bacterial Cell-Cycle Regulatory Network Operating in Time and Space
Q28255704A conserved RpoS-dependent small RNA controls the synthesis of major porin OmpD
Q38358029A microarray-based antibiotic screen identifies a regulatory role for supercoiling in the osmotic stress response of Escherichia coli
Q38345092A motif co-occurrence approach for genome-wide prediction of transcription-factor-binding sites in Escherichia coli
Q40286794A quantitative study of gene regulatory pathways in Bacillus subtilis for virulence and competence phenotype by quorum sensing
Q34793813A role for mechanosensitive channels in survival of stationary phase: regulation of channel expression by RpoS
Q35560166Adoption of the transiently non-culturable state--a bacterial survival strategy?
Q39678885Bacillus subtilis functional genomics: global characterization of the stringent response by proteome and transcriptome analysis.
Q56902186Bacterial transcription factors involved in global regulation
Q33935887Borrelia burgdorferi sigma54 is required for mammalian infection and vector transmission but not for tick colonization
Q38231233Breaking through the stress barrier: the role of BolA in Gram-negative survival
Q50106113Cell-cell interactions influence resistance and survival of Salmonella serotype Typhimurium to environmental stress
Q39656445Characterization of a pore-forming cytotoxin expressed by Salmonella enterica serovars typhi and paratyphi A.
Q34321388Collaborative regulation of Escherichia coli glutamate-dependent acid resistance by two AraC-like regulators, GadX and GadW (YhiW)
Q61798686Combined Transcriptome and Proteome Analysis of RpoS Regulon Reveals Its Role in Spoilage Potential of Pseudomonas fluorescens
Q93116476Complex general stress response regulation in Sphingomonas melonis Fr1 revealed by transcriptional analyses
Q43023350Contribution of RpoS to metabolic efficiency and ectoines synthesis during the osmo- and heat-stress response in the halophilic bacterium Chromohalobacter salexigens.
Q37756016Contribution of rpoS and bolA genes in biofilm formation in Escherichia coli K-12 MG1655.
Q51024953Crl, a low temperature-induced protein in Escherichia coli that binds directly to the stationary phase sigma subunit of RNA polymerase.
Q33415393DISTILLER: a data integration framework to reveal condition dependency of complex regulons in Escherichia coli
Q34563286DNA microarray and proteomic analyses of the RpoS regulon in Geobacter sulfurreducens
Q91173741Defining the impact of exoribonucleases in the shift between exponential and stationary phases
Q37008414Differential and cross-transcriptional control of duplicated genes encoding alternative sigma factors in Streptomyces ambofaciens
Q37583315Diversion of the metabolic flux from pyruvate dehydrogenase to pyruvate oxidase decreases oxidative stress during glucose metabolism in nongrowing Escherichia coli cells incubated under aerobic, phosphate starvation conditions
Q35026374Dynamics and diversions in base excision DNA repair of oxidized abasic lesions
Q43282656Effect of acid stress, antibiotic resistance, and heat shock on the resistance of Listeria monocytogenes to UV light when suspended in distilled water and fresh brine
Q42200846Effect of heat, acidification, and chlorination on Salmonella enterica serovar typhimurium cells in a biofilm formed at the air-liquid interface
Q39587976Effects of combination of different -10 hexamers and downstream sequences on stationary-phase-specific sigma factor sigma(S)-dependent transcription in Pseudomonas putida
Q43339021Efficacy of solar disinfection of Escherichia coli, Shigella flexneri, Salmonella Typhimurium and Vibrio cholerae
Q33995046Evidence for a role of rpoE in stressed and unstressed cells of marine Vibrio angustum strain S14
Q47928367Evolutionary loss of the rdar morphotype in Salmonella as a result of high mutation rates during laboratory passage
Q47375419Facilitated Dissociation Kinetics of Dimeric Nucleoid-Associated Proteins Follow a Universal Curve
Q87926216Force-extension behavior of DNA in the presence of DNA-bending nucleoid associated proteins
Q50121575Formate protects stationary-phase Escherichia coli and Salmonella cells from killing by a cationic antimicrobial peptide
Q44067985Gene expression profiling of Escherichia coli growth transitions: an expanded stringent response model
Q46878658Gene expression profiling of intrinsic thermotolerance in Escherichia coli
Q35721656General transcription factor specified global gene regulation in archaea
Q38302764Genome organisation and chromatin structure in Escherichia coli
Q34505744Genome-wide analysis of the Pho regulon in a pstCA mutant of Citrobacter rodentium
Q37488918Genome-wide transcriptional profiling of the Escherichia coli response to a proline-rich antimicrobial peptide
Q39538692Global adaptations resulting from high population densities in Escherichia coli cultures
Q34695153Global adjustment of microbial physiology during free radical stress
Q33995875Global analysis of Escherichia coli gene expression during the acetate-induced acid tolerance response
Q33256879Global gene expression during stringent response in Corynebacterium glutamicum in presence and absence of the rel gene encoding (p)ppGpp synthase
Q56926710Growth conditions influence UVB sensitivity and oxidative damage in an estuarine bacterial isolate
Q33218776Growth phase dependent regulation of protein composition in Rhodopirellula baltica.
Q33638020Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid
Q43131776Heterologous ectoine production in Escherichia coli: by-passing the metabolic bottle-neck.
Q36757376Hha controls Escherichia coli O157:H7 biofilm formation by differential regulation of global transcriptional regulators FlhDC and CsgD
Q44033129Identification and characterization of the Escherichia coli stress protein UP12, a putative in vivo substrate of GroEL.
Q33994705Identification of RpoS (sigma(S))-regulated genes in Salmonella enterica serovar typhimurium
Q42645499Identification of a non-haem catalase in Salmonella and its regulation by RpoS (sigmaS).
Q42120749Improvement of multiple-stress tolerance and lactic acid production in Lactococcus lactis NZ9000 under conditions of thermal stress by heterologous expression of Escherichia coli DnaK.
Q27342402In vivo transcription kinetics of a synthetic gene uninvolved in stress-response pathways in stressed Escherichia coli cells
Q30444819Influence of enteric bacteria conditioned media on recovery of Escherichia coli O157:H7 exposed to starvation and sodium hypochlorite.
Q42705070Influence of starvation on potential ammonia-oxidizing activity and amoA mRNA levels of Nitrosospira briensis.
Q35805938Interaction of the histone-like nucleoid structuring protein and the general stress response regulator RpoS at Vibrio cholerae promoters that regulate motility and hemagglutinin/protease expression
Q39504849Involvement of sigma(S) in starvation-induced transposition of Pseudomonas putida transposon Tn4652.
Q57262777Isolation and characterization of sigma(70)-retaining transcription elongation complexes from Escherichia coli
Q38302084Large-scale monitoring of pleiotropic regulation of gene expression by the prokaryotic nucleoid-associated protein, H-NS.
Q38261448Microfluidic single-cell analysis links boundary environments and individual microbial phenotypes
Q38744193Mini-review: Biofilm responses to oxidative stress
Q34238561Modelling and analysis of central metabolism operating regulatory interactions in salt stress conditions in a L-carnitine overproducing E. coli strain.
Q39026173Molecular mechanism for establishment of signal-dependent regulation in the PhoP/PhoQ system
Q37402014Nucleoid-associated proteins and bacterial physiology.
Q42603337Nucleotides from -16 to -12 determine specific promoter recognition by bacterial sigmaS-RNA polymerase.
Q46019343Open complex formation in vitro by sigma38 (rpoS) RNA polymerase: roles for region 2 amino acids.
Q36926990Parallel pathways of repression and antirepression governing the transition to stationary phase in Bacillus subtilis
Q28765036Population growth rate and its determinants: an overview
Q52110581Post-transcriptional regulation of the Streptomyces coelicolor stress responsive sigma factor, SigH, involves translational control, proteolytic processing, and an anti-sigma factor homolog.
Q30857380Promoter use by sigma 38 (rpoS) RNA polymerase. Amino acid clusters for DNA binding and isomerization
Q33879812Quorum sensing and starvation: signals for entry into stationary phase
Q51242212RNase R affects gene expression in stationary phase: regulation of ompA.
Q35556406Regulation cascade of flagellar expression in Gram-negative bacteria.
Q34011916Regulation of osmC gene expression by the two-component system rcsB-rcsC in Escherichia coli
Q39497964Role of CcpA in regulation of the central pathways of carbon catabolism in Bacillus subtilis
Q52962259Role of activator site position and a distal UP-element half-site for sigma factor selectivity at a CRP/H-NS-activated sigma(s)-dependent promoter in Escherichia coli.
Q81311699Sensing nutrient levels in bacteria
Q42650826Sigma38 (rpoS) RNA polymerase promoter engagement via -10 region nucleotides
Q37583338SigmaS-dependent gene expression at the onset of stationary phase in Escherichia coli: function of sigmaS-dependent genes and identification of their promoter sequences.
Q28220384Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase
Q28200768Signal transduction cascade for regulation of RpoS: temperature regulation of DsrA
Q34200448Single-cell census of mechanosensitive channels in living bacteria
Q45126633Substitutions in region 2.4 of sigma70 allow recognition of the sigmaS-dependent aidB promoter.
Q33315558Superhelical destabilization in regulatory regions of stress response genes
Q34017427Switching on and off with RNA.
Q34674116The Caulobacter crescentus CgtAC protein cosediments with the free 50S ribosomal subunit
Q33996500The alkane hydroxylase gene of Burkholderia cepacia RR10 is under catabolite repression control
Q35584872The bacterial adaptive response gene, barA, encodes a novel conserved histidine kinase regulatory switch for adaptation and modulation of metabolism in Escherichia coli
Q34835579The bacterial regulatory protein H-NS--a versatile modulator of nucleic acid structures
Q34695160The extracytoplasmic function (ECF) sigma factors
Q40345503The growth advantage in stationary-phase phenotype conferred by rpoS mutations is dependent on the pH and nutrient environment
Q43791968The looped domain organization of the nucleoid in histone-like protein defective Escherichia coli strains
Q40763627The protease Lon and the RNA-binding protein Hfq reduce silencing of the Escherichia coli bgl operon by H-NS.
Q35978799The response regulator Rrp2 is essential for the expression of major membrane lipoproteins in Borrelia burgdorferi
Q52974214The response regulator RssB, a recognition factor for sigmaS proteolysis in Escherichia coli, can act like an anti-sigmaS factor.
Q37392505The role of 3'-5' exoribonucleases in RNA degradation
Q28280186The small noncoding DsrA RNA is an acid resistance regulator in Escherichia coli
Q30847312The stringent response genes relA and spoT are important for Escherichia coil biofilms under slow-growth conditions
Q35201066The unique features of glycolytic pathways in Archaea.
Q47369880Thermal inactivation of Enterococcus faecium: effect of growth temperature and physiological state of microbial cells.
Q33784478Tiling array analysis of UV treated Escherichia coli predicts novel differentially expressed small peptides
Q35781053Topological Behavior of Plasmid DNA
Q36701127Transcription profile of Escherichia coli: genomic SELEX search for regulatory targets of transcription factors
Q34075334Trehalose synthesis is induced upon exposure of Escherichia coli to cold and is essential for viability at low temperatures
Q37983790Understanding physiological responses to pre-treatment inhibitors in ethanologenic fermentations.
Q36540552Unusual properties of catalase A (KatA) of Pseudomonas aeruginosa PA14 are associated with its biofilm peroxide resistance
Q36351458Virulence meets metabolism: Cra and KdpE gene regulation in enterohemorrhagic Escherichia coli
Q57194708Whole genome microarray analysis of the expression profile of Escherichia coli in response to exposure to para-nitrophenol
Q39922781sigma factor selectivity of Escherichia coli RNA polymerase: role for CRP, IHF and lrp transcription factors

Search more.