review article | Q7318358 |
scholarly article | Q13442814 |
P356 | DOI | 10.1016/S0065-2164(08)01002-2 |
P698 | PubMed publication ID | 19245936 |
P50 | author | Charles J. Dorman | Q42123977 |
P2093 | author name string | Charles J Dorman | |
P2860 | cites work | Hfq is necessary for regulation by the untranslated RNA DsrA | Q24548921 |
Structure of the Escherichia coli leucine-responsive regulatory protein Lrp reveals a novel octameric assembly | Q24684156 | ||
Fis Targets Assembly of the Xis Nucleoprotein Filament to Promote Excisive Recombination by Phage Lambda | Q27643723 | ||
The crystal structure of Dps, a ferritin homolog that binds and protects DNA | Q27749085 | ||
DNA supercoiling and transcription in Escherichia coli: The FIS connection | Q28207592 | ||
Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase | Q28220384 | ||
DNA supercoiling and environmental regulation of virulence gene expression in Shigella flexneri | Q28245605 | ||
A physiological role for DNA supercoiling in the osmotic regulation of gene expression in S. typhimurium and E. coli | Q28280711 | ||
H-NS mediates the silencing of laterally acquired genes in bacteria | Q28490022 | ||
Activation of gene expression by a novel DNA structural transmission mechanism that requires supercoiling-induced DNA duplex destabilization in an upstream activating sequence | Q28533041 | ||
A DNA structural atlas for Escherichia coli | Q30002426 | ||
Bacterial chromatin organization by H-NS protein unravelled using dual DNA manipulation | Q33263766 | ||
Contributions of UP elements and the transcription factor FIS to expression from the seven rrn P1 promoters in Escherichia coli | Q33554485 | ||
The ability of Salmonella to enter mammalian cells is affected by bacterial growth state | Q33616743 | ||
Interplay of global regulators and cell physiology in the general stress response of Escherichia coli | Q33632476 | ||
Molecular anatomy of a transcription activation patch: FIS-RNA polymerase interactions at the Escherichia coli rrnB P1 promoter | Q33885955 | ||
Adaptation to famine: a family of stationary-phase genes revealed by microarray analysis | Q34159691 | ||
Growth phase-dependent regulation and stringent control of fis are conserved processes in enteric bacteria and involve a single promoter (fis P) in Escherichia coli | Q34555728 | ||
The seven E. coli ribosomal RNA operon upstream regulatory regions differ in structure and transcription factor binding efficiencies | Q34559131 | ||
Long-term experimental evolution in Escherichia coli. XII. DNA topology as a key target of selection | Q34570839 | ||
The leucine-responsive regulatory protein, Lrp, activates transcription of the fim operon in Salmonella enterica serovar typhimurium via the fimZ regulatory gene. | Q34709533 | ||
Modes of regulation of RpoS by H-NS | Q35075713 | ||
Regulation of gene expression by histone-like proteins in bacteria. | Q35097677 | ||
Communication between Hin recombinase and Fis regulatory subunits during coordinate activation of Hin-catalyzed site-specific DNA inversion | Q35208906 | ||
Sequence, regulation, and functions of fis in Salmonella typhimurium | Q35582859 | ||
The Fis protein: it's not just for DNA inversion anymore | Q35658496 | ||
H-NS: a universal regulator for a dynamic genome | Q35752413 | ||
Mechanism of chromosome compaction and looping by the Escherichia coli nucleoid protein Fis | Q36007346 | ||
Involvement of Escherichia coli FIS protein in maintenance of bacteriophage mu lysogeny by the repressor: control of early transcription and inhibition of transposition | Q36102146 | ||
Dramatic changes in Fis levels upon nutrient upshift in Escherichia coli | Q36137894 | ||
Transpososome dynamics and regulation in Tn10 transposition | Q36648422 | ||
Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts | Q36700176 | ||
Anti-silencing: overcoming H-NS-mediated repression of transcription in Gram-negative enteric bacteria | Q37256199 | ||
Two Heat-Resistant, Low Molecular Weight Proteins from Escherichia coli That Stimulate DNA-Directed RNA Synthesis | Q37502833 | ||
Effects of FIS overexpression on cell growth, rRNA synthesis, and ribosome content in Escherichia coli | Q38301719 | ||
Genome organisation and chromatin structure in Escherichia coli | Q38302764 | ||
A role for the Escherichia coli H-NS-like protein StpA in OmpF porin expression through modulation of micF RNA stability | Q38307599 | ||
Escherichia coli histone-like protein H-NS preferentially binds to horizontally acquired DNA in association with RNA polymerase | Q38308470 | ||
Association of nucleoid proteins with coding and non-coding segments of the Escherichia coli genome. | Q38309827 | ||
Selective silencing of foreign DNA with low GC content by the H-NS protein in Salmonella | Q38312504 | ||
The integration host factor (IHF) integrates stationary-phase and virulence gene expression in Salmonella enterica serovar Typhimurium. | Q38314825 | ||
A global role for Fis in the transcriptional control of metabolism and type III secretion in Salmonella enterica serovar Typhimurium. | Q38338833 | ||
The DNA binding protein H-NS binds to and alters the stability of RNA in vitro and in vivo | Q38341060 | ||
Variable structures of Fis-DNA complexes determined by flanking DNA-protein contacts | Q38350596 | ||
The gyr genes of Salmonella enterica serovar Typhimurium are repressed by the factor for inversion stimulation, Fis. | Q38351905 | ||
Global gene expression profiling in Escherichia coli K12. The effects of leucine-responsive regulatory protein | Q38364098 | ||
An architectural role of the Escherichia coli chromatin protein FIS in organising DNA. | Q39516058 | ||
The Escherichia coli Fis Protein Stimulates Bacteriophage λ Integrative Recombination In Vitro | Q39749055 | ||
Fis activates the RpoS-dependent stationary-phase expression of proP in Escherichia coli | Q39838288 | ||
The Escherichia coli stpA gene is transiently expressed during growth in rich medium and is induced in minimal medium and by stress conditions. | Q39844343 | ||
Involvement of Fis protein in replication of the Escherichia coli chromosome | Q39933054 | ||
Fis plays a role in Tn5 and IS50 transposition | Q39935278 | ||
Dynamic state of DNA topology is essential for genome condensation in bacteria. | Q40450335 | ||
The FIS protein binds and bends the origin of chromosomal DNA replication, oriC, of Escherichia coli | Q40505779 | ||
Global gene expression profiling in Escherichia coli K12. The effects of integration host factor | Q41743959 | ||
Fis regulates transcriptional induction of RpoS in Salmonella enterica | Q42068290 | ||
Differential regulation of Escherichia coli topoisomerase I by Fis. | Q42609303 | ||
Activation of transcription initiation from a stable RNA promoter by a Fis protein-mediated DNA structural transmission mechanism | Q42630533 | ||
Structural basis for H-NS-mediated trapping of RNA polymerase in the open initiation complex at the rrnB P1. | Q42664136 | ||
Interrelated effects of DNA supercoiling, ppGpp, and low salt on melting within the Escherichia coli ribosomal RNA rrnB P1 promoter | Q43446001 | ||
FIS-dependent trans-activation of tRNA and rRNA operons of Escherichia coli | Q43828414 | ||
Escherichia coli prereplication complex assembly is regulated by dynamic interplay among Fis, IHF and DnaA. | Q44775863 | ||
Selective repression by Fis and H-NS at the Escherichia coli dps promoter. | Q46386594 | ||
The dps promoter is activated by OxyR during growth and by IHF and σs in stationary phase | Q47673138 | ||
A thermostable protein factor acting on in vitro DNA transcription | Q47736505 | ||
Interplay between global regulators of Escherichia coli: effect of RpoS, Lrp and H-NS on transcription of the gene osmC. | Q47848431 | ||
Expression of the Fis protein is sustained in late-exponential- and stationary-phase cultures of Salmonella enterica serovar Typhimurium grown in the absence of aeration | Q50068958 | ||
An H-NS-like stealth protein aids horizontal DNA transmission in bacteria | Q50074297 | ||
H-NS, the genome sentinel | Q50074672 | ||
Probing bacterial nucleoid structure with optical tweezers. | Q51066522 | ||
Three-dimensional structure of the E. coli DNA-binding protein FIS. | Q53030527 | ||
Fis stabilizes the interaction between RNA polymerase and the ribosomal promoter rrnB P1, leading to transcriptional activation. | Q53855219 | ||
Conformational changes of the upstream DNA mediated by H-NS and FIS regulate E. coli RrnB P1 promoter activity. | Q53937403 | ||
The Escherichia coli histone-like protein HU regulates rpoS translation. | Q54016367 | ||
The role of LRP and H-NS in transcription regulation: involvement of synergism, allostery and macromolecular crowding. | Q54449266 | ||
YdgT, the Hha paralogue in Escherichia coli, forms heteromeric complexes with H-NS and StpA. | Q54498518 | ||
Mechanism of transcriptional activation by FIS: role of core promoter structure and DNA topology. | Q54521059 | ||
The C-terminal domains of the RNA polymerase alpha subunits: contact site with Fis and localization during co-activation with CRP at the Escherichia coli proP P2 promoter. | Q54549828 | ||
Control of Escherichia coli type 1 fimbrial gene expression in stationary phase: a negative role for RpoS. | Q54569037 | ||
DNA supercoiling depends on the phosphorylation potential in Escherichia coli. | Q54591133 | ||
Antagonistic involvement of FIS and H-NS proteins in the transcriptional control of hns expression. | Q54592494 | ||
Inhibition of bacteriophage Mu transposition by Mu repressor and Fis. | Q54650806 | ||
Analysis of the Fis-dependent and Fis-independent transcription activation mechanisms of the Escherichia coli ribosomal RNA P1 promoter | Q54682148 | ||
The osmZ (bglY) gene encodes the DNA-binding protein H-NS (H1a), a component of the Escherichia coli K12 nucleoid. | Q54707912 | ||
Cellular factors couple recombination with growth phase: characterization of a new component in the lambda site-specific recombination pathway. | Q54761410 | ||
Host protein requirements for in vitro site-specific DNA inversion. | Q54776760 | ||
Role of the nucleoid-associated protein Fis in the regulation of virulence properties of enteropathogenic Escherichia coli | Q58827834 | ||
Involvement of FIS in the H-NS-mediated regulation of virF gene of Shigella and enteroinvasive Escherichia coli | Q61775013 | ||
The expression of the Escherichia coli fis gene is strongly dependent on the superhelical density of DNA | Q73072736 | ||
Twelve species of the nucleoid-associated protein from Escherichia coli. Sequence recognition specificity and DNA binding affinity | Q73157405 | ||
DNA supercoiling contributes to disconnect sigmaS accumulation from sigmaS-dependent transcription in Escherichia coli | Q73215732 | ||
A DNA architectural protein couples cellular physiology and DNA topology in Escherichia coli | Q73265521 | ||
Variation in HU composition during growth of Escherichia coli: the heterodimer is required for long term survival | Q73876610 | ||
FIS modulates growth phase-dependent topological transitions of DNA in Escherichia coli | Q73947854 | ||
Differential binding of the Escherichia coli HU, homodimeric forms and heterodimeric form to linear, gapped and cruciform DNA | Q74637667 | ||
The small nucleoid protein Fis is involved in Vibrio cholerae quorum sensing | Q79444468 | ||
P921 | main subject | physiology | Q521 |
P304 | page(s) | 47-64 | |
P577 | publication date | 2009-01-01 | |
P1433 | published in | Advances in Applied Microbiology | Q15753069 |
P1476 | title | Nucleoid-associated proteins and bacterial physiology | |
P478 | volume | 67 |
Q58728313 | A single molecule analysis of H-NS uncouples DNA binding affinity from DNA specificity |
Q42700575 | Activity of the osmotically regulated yqiHIK promoter from Bacillus subtilis is controlled at a distance |
Q38014377 | Archaeal chromatin proteins |
Q38354049 | Bacterial histone-like proteins: roles in stress resistance |
Q37688895 | Bacterial nucleoid-associated proteins, nucleoid structure and gene expression |
Q35111368 | Bridged filaments of histone-like nucleoid structuring protein pause RNA polymerase and aid termination in bacteria |
Q37746934 | Carbon metabolism of intracellular bacterial pathogens and possible links to virulence |
Q42739753 | Cell surface-associated proteins in the filamentous cyanobacterium Anabaena sp. strain PCC 7120. |
Q38091477 | Co-operative roles for DNA supercoiling and nucleoid-associated proteins in the regulation of bacterial transcription |
Q33878109 | Compaction and condensation of DNA mediated by the C-terminal domain of Hfq |
Q33999601 | Comparative genomics of multidrug resistance-encoding IncA/C plasmids from commensal and pathogenic Escherichia coli from multiple animal sources. |
Q34723624 | Concentration-dependent exchange accelerates turnover of proteins bound to double-stranded DNA |
Q27678077 | Control of DNA minor groove width and Fis protein binding by the purine 2-amino group |
Q34302323 | DNA recognition by a σ(54) transcriptional activator from Aquifex aeolicus |
Q36626066 | Detection of the Wolbachia-encoded DNA binding protein, HU beta, in mosquito gonads |
Q36124083 | Differential Regulation of the Surface-Exposed and Secreted SslE Lipoprotein in Extraintestinal Pathogenic Escherichia coli |
Q42409258 | Dimerization and DNA-dependent aggregation of the Escherichia coli nucleoid protein and chaperone CbpA. |
Q33744477 | Direct interaction between quorum-sensing regulator SmcR and RNA polymerase is mediated by integration host factor to activate vvpE encoding elastase in Vibrio vulnificus. |
Q42620733 | Distribution of genes encoding nucleoid-associated protein homologs in plasmids |
Q35746786 | Double-Strand Break Repair and Holliday Junction Processing Are Required for Chromosome Processing in Stationary-Phase Escherichia coli Cells |
Q92785357 | Early fate of exogenous promoters in E. coli |
Q54270927 | Effect of promoter-upstream sequence on σ38-dependent stationary phase gene transcription. |
Q91866642 | Endogenous and Foreign Nucleoid-Associated Proteins of Bacteria: Occurrence, Interactions and Effects on Mobile Genetic Elements and Host's Biology |
Q60923138 | Epigallocatechin Gallate Remodelling of Hfq Amyloid-Like Region Affects Survival |
Q57262835 | Evolution of Eukaryotic Chromatin Proteins and Transcription Factors |
Q36024525 | Evolution of a global regulator: Lrp in four orders of γ-Proteobacteria |
Q47375419 | Facilitated Dissociation Kinetics of Dimeric Nucleoid-Associated Proteins Follow a Universal Curve |
Q87926216 | Force-extension behavior of DNA in the presence of DNA-bending nucleoid associated proteins |
Q29346853 | Functional analysis of the integration host factor site of the σ(54) Pu promoter of Pseudomonas putida by in vivo UV imprinting |
Q54329564 | Gene silencing by H-NS from distal DNA site. |
Q33756129 | Genome sequence of adherent-invasive Escherichia coli and comparative genomic analysis with other E. coli pathotypes |
Q36741337 | Global analysis of transcriptional regulators in Staphylococcus aureus |
Q41558018 | Growth phase-dependent expression profiles of three vital H-NS family proteins encoded on the chromosome of Pseudomonas putida KT2440 and on the pCAR1 plasmid |
Q42872563 | H-NS mediates the dissociation of a refractory protein-DNA complex during Tn10/IS10 transposition. |
Q33899608 | HupB, a nucleoid-associated protein of Mycobacterium tuberculosis, is modified by serine/threonine protein kinases in vivo. |
Q54273780 | IHF is a trans-acting factor implicated in the regulation of the proU P2 promoter. |
Q41766474 | IHF is required for the transcriptional regulation of the Desulfovibrio vulgaris Hildenborough orp operons. |
Q41121354 | Lack of the H-NS Protein Results in Extended and Aberrantly Positioned DNA during Chromosome Replication and Segregation in Escherichia coli |
Q54252132 | Lysine acetylation of the Mycobacterium tuberculosis HU protein modulates its DNA binding and genome organization. |
Q35632553 | Modes of Escherichia coli Dps Interaction with DNA as Revealed by Atomic Force Microscopy |
Q37680419 | Multiple-binding-site mechanism explains concentration-dependent unbinding rates of DNA-binding proteins |
Q36497535 | MvaT Family Proteins Encoded on IncP-7 Plasmid pCAR1 and the Host Chromosome Regulate the Host Transcriptome Cooperatively but Differently |
Q44620087 | On the stoichiometry of Deinococcus radiodurans Dps-1 binding to duplex DNA. |
Q28067371 | Opening the Strands of Replication Origins-Still an Open Question |
Q34119223 | Pmr, a histone-like protein H1 (H-NS) family protein encoded by the IncP-7 plasmid pCAR1, is a key global regulator that alters host function |
Q51393409 | Positive regulatory dynamics by a small noncoding RNA: speeding up responses under temperature stress. |
Q34268658 | Promiscuous restriction is a cellular defense strategy that confers fitness advantage to bacteria |
Q37576199 | Regulating toxin-antitoxin expression: controlled detonation of intracellular molecular timebombs |
Q39798440 | Regulation of lipid biosynthesis, sliding motility, and biofilm formation by a membrane-anchored nucleoid-associated protein of Mycobacterium tuberculosis. |
Q36464974 | Rho and NusG suppress pervasive antisense transcription in Escherichia coli |
Q26859579 | Role of RNA polymerase and transcription in the organization of the bacterial nucleoid |
Q33725419 | Role of decreased levels of Fis histone-like protein in Crohn's disease-associated adherent invasive Escherichia coli LF82 bacteria interacting with intestinal epithelial cells |
Q36368867 | Solitary restriction endonucleases in prokaryotic genomes. |
Q51299285 | Structural and evolutionary analyses reveal determinants of DNA binding specificities of nucleoid-associated proteins HU and IHF. |
Q37974625 | Structural and molecular genetic analyses of the bacterial carbazole degradation system. |
Q21135471 | The E. coli anti-sigma factor Rsd: studies on the specificity and regulation of its expression |
Q26741702 | The Escherichia Coli Hfq Protein: An Unattended DNA-Transactions Regulator |
Q37264866 | The Haemophilus ducreyi Fis protein is involved in controlling expression of the lspB-lspA2 operon and other virulence factors |
Q29346856 | The IHF regulon of exponentially growing Pseudomonas putida cells |
Q42533037 | The effect of mobile element IS10 on experimental regulatory evolution in Escherichia coli |
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Q36956238 | The quantitative and condition-dependent Escherichia coli proteome |
Q27660559 | The shape of the DNA minor groove directs binding by the DNA-bending protein Fis |
Q33809409 | The transposon-like Correia elements encode numerous strong promoters and provide a potential new mechanism for phase variation in the meningococcus. |
Q38536129 | The λ Integrase Site-specific Recombination Pathway |
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