review article | Q7318358 |
scholarly article | Q13442814 |
P50 | author | Alejandra Loyola | Q89763796 |
P2093 | author name string | Raquel Quatrini | |
Rodrigo Flores-Ríos | |||
P2860 | cites work | Evidence for direct protein-protein interaction between members of the enterobacterial Hha/YmoA and H-NS families of proteins | Q24544235 |
Histonelike proteins of bacteria | Q24634363 | ||
Compositional discordance between prokaryotic plasmids and host chromosomes | Q25256883 | ||
HU multimerization shift controls nucleoid compaction | Q27333092 | ||
The shape of the DNA minor groove directs binding by the DNA-bending protein Fis | Q27660559 | ||
ymoA, a Yersinia enterocolitica chromosomal gene modulating the expression of virulence functions | Q28250224 | ||
Mechanisms of, and barriers to, horizontal gene transfer between bacteria | Q28270244 | ||
Lsr2 of Mycobacterium represents a novel class of H-NS-like proteins | Q28487533 | ||
H-NS mediates the silencing of laterally acquired genes in bacteria | Q28490022 | ||
A Novel AT-Rich DNA Recognition Mechanism for Bacterial Xenogeneic Silencer MvaT | Q28548172 | ||
Amelioration of bacterial genomes: rates of change and exchange | Q29618260 | ||
HU and integration host factor function as auxiliary proteins in cleavage of phage lambda cohesive ends by terminase | Q30367623 | ||
Viewing single lambda site-specific recombination events from start to finish | Q30478039 | ||
Silencing of cryptic prophages in Corynebacterium glutamicum | Q30830810 | ||
Defined chromosome structure in the genome-reduced bacterium Mycoplasma pneumoniae | Q30841364 | ||
H-NS and H-NS-like proteins in Gram-negative bacteria and their multiple role in the regulation of bacterial metabolism | Q30984791 | ||
Differential regulation of horizontally acquired and core genome genes by the bacterial modulator H-NS. | Q33466737 | ||
Domain organization and oligomerization among H-NS-like nucleoid-associated proteins in bacteria. | Q33594386 | ||
Differential effects and interactions of endogenous and horizontally acquired H-NS-like proteins in pathogenic Escherichia coli | Q33621541 | ||
A divalent switch drives H-NS/DNA-binding conformations between stiffening and bridging modes. | Q33631136 | ||
Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid | Q33638020 | ||
The transcriptional regulator Rok binds A+T-rich DNA and is involved in repression of a mobile genetic element in Bacillus subtilis. | Q33750107 | ||
Proteomic analyses of nucleoid-associated proteins in Escherichia coli, Pseudomonas aeruginosa, Bacillus subtilis, and Staphylococcus aureus | Q33889440 | ||
The Pseudomonas aeruginosa pathogenicity island PAPI-1 is transferred via a novel type IV pilus | Q33964255 | ||
Pmr, a histone-like protein H1 (H-NS) family protein encoded by the IncP-7 plasmid pCAR1, is a key global regulator that alters host function | Q34119223 | ||
Nucleoprotein architectures regulating the directionality of viral integration and excision | Q34120128 | ||
A fundamental regulatory mechanism operating through OmpR and DNA topology controls expression of Salmonella pathogenicity islands SPI-1 and SPI-2 | Q34211607 | ||
Shigella flexneri 2a strain 2457T expresses three members of the H-NS-like protein family: characterization of the Sfh protein | Q34219679 | ||
Xis protein binding to the left arm stimulates excision of conjugative transposon Tn916 | Q34308958 | ||
Integration host factor is required for the DNA inversion that controls phase variation in Escherichia coli | Q34346575 | ||
High-resolution mapping of the spatial organization of a bacterial chromosome | Q34380184 | ||
Timely binding of IHF and Fis to DARS2 regulates ATP-DnaA production and replication initiation. | Q34446766 | ||
Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene | Q34465580 | ||
Growth phase-dependent regulation and stringent control of fis are conserved processes in enteric bacteria and involve a single promoter (fis P) in Escherichia coli | Q34555728 | ||
Information analysis of Fis binding sites | Q34646135 | ||
Characterization of the replication, maintenance, and transfer features of the IncP-7 plasmid pCAR1, which carries genes involved in carbazole and dioxin degradation. | Q34649437 | ||
Genome-wide analysis of the salmonella Fis regulon and its regulatory mechanism on pathogenicity islands | Q34746224 | ||
Role of histone-like proteins H-NS and StpA in expression of virulence determinants of uropathogenic Escherichia coli | Q34976630 | ||
Integrated circuits: how transcriptional silencing and counter-silencing facilitate bacterial evolution | Q35070419 | ||
The Bacteroides thetaiotaomicron protein Bacteroides host factor A participates in integration of the integrative conjugative element CTnDOT into the chromosome | Q35214795 | ||
Effects of three different nucleoid-associated proteins encoded on IncP-7 plasmid pCAR1 on host Pseudomonas putida KT2440. | Q35221153 | ||
Gene order and chromosome dynamics coordinate spatiotemporal gene expression during the bacterial growth cycle | Q35673712 | ||
Structure of the histone-like protein H-NS and its role in regulation and genome superstructure | Q35737936 | ||
IHF and HU: flexible architects of bent DNA. | Q35753197 | ||
Transposable Phage Mu | Q35801161 | ||
Genomic analysis of DNA binding and gene regulation by homologous nucleoid-associated proteins IHF and HU in Escherichia coli K12. | Q35906075 | ||
DNA supercoiling - a global transcriptional regulator for enterobacterial growth? | Q36026801 | ||
Gene 5.5 protein of bacteriophage T7 inhibits the nucleoid protein H-NS of Escherichia coli | Q36129355 | ||
Dramatic changes in Fis levels upon nutrient upshift in Escherichia coli | Q36137894 | ||
Multiple effects of Fis on integration and the control of lysogeny in phage lambda | Q36148023 | ||
EbfC (YbaB) is a new type of bacterial nucleoid-associated protein and a global regulator of gene expression in the Lyme disease spirochete | Q36211772 | ||
Bacterial chromatin | Q36229105 | ||
Mobile genetic elements: the agents of open source evolution | Q36247081 | ||
A global role for Fis in the transcriptional control of metabolism and type III secretion in Salmonella enterica serovar Typhimurium. | Q38338833 | ||
The virF promoter in Shigella: more than just a curved DNA stretch | Q38345190 | ||
Variable structures of Fis-DNA complexes determined by flanking DNA-protein contacts | Q38350596 | ||
The gyr genes of Salmonella enterica serovar Typhimurium are repressed by the factor for inversion stimulation, Fis. | Q38351905 | ||
Horizontal gene transfer: building the web of life. | Q38549036 | ||
Xenogeneic Silencing and Its Impact on Bacterial Genomes | Q38881567 | ||
Structure and function of bacterial H-NS protein. | Q39027961 | ||
H-NST induces LEE expression and the formation of attaching and effacing lesions in enterohemorrhagic Escherichia coli. | Q39030232 | ||
The behavior of mobile genetic elements (MGEs) in different environments | Q39080041 | ||
The StpA protein functions as a molecular adapter to mediate repression of the bgl operon by truncated H-NS in Escherichia coli | Q39564715 | ||
Overproduction of Escherichia coli integration host factor, a protein with nonidentical subunits | Q36264685 | ||
Sequence characterization and comparative analysis of three plasmids isolated from environmental Vibrio spp. | Q36313333 | ||
MvaT Family Proteins Encoded on IncP-7 Plasmid pCAR1 and the Host Chromosome Regulate the Host Transcriptome Cooperatively but Differently | Q36497535 | ||
Transpososome dynamics and regulation in Tn10 transposition | Q36648422 | ||
The novel Hha/YmoA family of nucleoid-associated proteins: use of structural mimicry to modulate the activity of the H-NS family of proteins | Q36658260 | ||
Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts | Q36700176 | ||
Silencing of xenogeneic DNA by H-NS-facilitation of lateral gene transfer in bacteria by a defense system that recognizes foreign DNA. | Q36851768 | ||
H-NS family members function coordinately in an opportunistic pathogen | Q36999879 | ||
Analysis of phage Mu DNA transposition by whole-genome Escherichia coli tiling arrays reveals a complex relationship to distribution of target selection protein B, transcription and chromosome architectural elements. | Q37017245 | ||
Borrelia burgdorferi EbfC defines a newly-identified, widespread family of bacterial DNA-binding proteins. | Q37149766 | ||
Genomic islands: tools of bacterial horizontal gene transfer and evolution | Q37248338 | ||
Anti-silencing: overcoming H-NS-mediated repression of transcription in Gram-negative enteric bacteria | Q37256199 | ||
Characterization of the nucleoid-associated protein YejK. | Q37272077 | ||
DNA bridging and antibridging: a role for bacterial nucleoid-associated proteins in regulating the expression of laterally acquired genes | Q37389789 | ||
Nucleoid-associated proteins and bacterial physiology. | Q37402014 | ||
Bacterial nucleoid-associated proteins, nucleoid structure and gene expression | Q37688895 | ||
Functional evolution of bacterial histone-like HU proteins. | Q37756442 | ||
Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow. | Q37770056 | ||
Effects of nucleoid-associated proteins on bacterial chromosome structure and gene expression | Q37800563 | ||
TF1, a bacteriophage-specific DNA-binding and DNA-bending protein | Q37834031 | ||
Pervasive regulation of nucleoid structure and function by nucleoid-associated proteins. | Q37834794 | ||
Trends and barriers to lateral gene transfer in prokaryotes | Q37920344 | ||
Structural and molecular genetic analyses of the bacterial carbazole degradation system. | Q37974625 | ||
Bacterial virulence and Fis: adapting regulatory networks to the host environment. | Q38173966 | ||
H-NS-like nucleoid-associated proteins, mobile genetic elements and horizontal gene transfer in bacteria. | Q38226682 | ||
A molecular mechanism for the repression of transcription by the H-NS protein | Q38291337 | ||
HU protein of Escherichia coli binds specifically to DNA that contains single-strand breaks or gaps | Q38296278 | ||
Genome organisation and chromatin structure in Escherichia coli | Q38302764 | ||
Selective silencing of foreign DNA with low GC content by the H-NS protein in Salmonella | Q38312504 | ||
Role of plasmid- and chromosomally encoded Hha proteins in modulation of gene expression in E. coli O157:H7. | Q38318003 | ||
Function of IHF in lambda DNA packaging. I. Identification of the strong binding site for integration host factor and the locus for intrinsic bending in cosB. | Q38320845 | ||
A genetic selection for supercoiling mutants of Escherichia coli reveals proteins implicated in chromosome structure | Q38321551 | ||
Opening of the replication origin of Escherichia coli by DnaA protein with protein HU or IHF. | Q38324468 | ||
LeuO protein delimits the transcriptionally active and repressive domains on the bacterial chromosome | Q38330605 | ||
Genomic and functional analyses of SXT, an integrating antibiotic resistance gene transfer element derived from Vibrio cholerae | Q39679833 | ||
R391: a conjugative integrating mosaic comprised of phage, plasmid, and transposon elements | Q39680259 | ||
Serratia marcescens contains a heterodimeric HU protein like Escherichia coli and Salmonella typhimurium | Q39839820 | ||
The small nucleoid-binding proteins H-NS, HU, and Fis affect hilA expression in Salmonella enterica serovar Typhimurium | Q39863987 | ||
Fis plays a role in Tn5 and IS50 transposition | Q39935278 | ||
The positive and negative regulation of Tn10 transposition by IHF is mediated by structurally asymmetric transposon arms | Q39982131 | ||
The interplay between DNA topology and accessory factors in site-specific recombination in bacteria and their bacteriophages. | Q40109164 | ||
Increased bending rigidity of single DNA molecules by H-NS, a temperature and osmolarity sensor | Q40233805 | ||
E. coli DNA binding protein HU forms nucleosome-like structure with circular double-stranded DNA | Q40237225 | ||
The histone-like protein HU binds specifically to DNA recombination and repair intermediates | Q40388402 | ||
The regulation of transcription initiation by integration host factor | Q40468930 | ||
The HimA and HimD subunits of integration host factor can specifically bind to DNA as homodimers. | Q40791356 | ||
The role of FIS in trans activation of stable RNA operons of E. coli | Q41204267 | ||
Bacterial-Chromatin Structural Proteins Regulate the Bimodal Expression of the Locus of Enterocyte Effacement (LEE) Pathogenicity Island in Enteropathogenic Escherichia coli. | Q41334372 | ||
RovA is autoregulated and antagonizes H-NS-mediated silencing of invasin and rovA expression in Yersinia pseudotuberculosis. | Q41461984 | ||
Growth phase-dependent expression profiles of three vital H-NS family proteins encoded on the chromosome of Pseudomonas putida KT2440 and on the pCAR1 plasmid | Q41558018 | ||
Complete genome sequence of temperate bacteriophage AcaML1 from the extreme acidophile Acidithiobacillus caldus ATCC 51756 | Q41574244 | ||
A novel nucleoid-associated protein coordinates chromosome replication and chromosome partition | Q41627253 | ||
Control of directionality in lambda site specific recombination | Q41853516 | ||
Single-molecule unzipping force analysis of HU-DNA complexes | Q41860538 | ||
Coordination of genomic structure and transcription by the main bacterial nucleoid-associated protein HU. | Q42007285 | ||
Alternate SlyA and H-NS nucleoprotein complexes control hlyE expression in Escherichia coli K-12. | Q42068068 | ||
Direct and indirect effects of H-NS and Fis on global gene expression control in Escherichia coli | Q42113114 | ||
Transposable prophage Mu is organized as a stable chromosomal domain of E. coli. | Q42254966 | ||
Requirement for Vibrio cholerae integration host factor in conjugative DNA transfer | Q42577799 | ||
H-NS binds with high affinity to the Tn10 transpososome and promotes transpososome stabilization | Q42587144 | ||
The putative Orf4 of broad-host-range conjugative plasmid R446 could Be related to the H-NS family of bacterial nucleoid-associated proteins | Q42595406 | ||
The DNA-binding protein HBsu is essential for normal growth and development in Bacillus subtilis | Q42603038 | ||
Differential regulation of Escherichia coli topoisomerase I by Fis. | Q42609303 | ||
Distribution of genes encoding nucleoid-associated protein homologs in plasmids | Q42620733 | ||
Response of the Pseudomonas host chromosomal transcriptome to carriage of the IncP-7 plasmid pCAR1. | Q42640374 | ||
Modulation of primary cell function of host Pseudomonas bacteria by the conjugative plasmid pCAR1. | Q42663815 | ||
Repression of intracellular virulence factors in Salmonella by the Hha and YdgT nucleoid-associated proteins | Q42845289 | ||
Temperature-dependent conjugative transfer of R27: role of chromosome- and plasmid-encoded Hha and H-NS proteins | Q42863256 | ||
The global bacterial regulator H-NS promotes transpososome formation and transposition in the Tn5 system | Q43191457 | ||
A truncated H-NS-like protein from enteropathogenic Escherichia coli acts as an H-NS antagonist | Q45231403 | ||
Genetic and biochemical characteristics of the histone-like protein DR0199 in Deinococcus radiodurans | Q46081090 | ||
Genome-wide analysis of the H-NS and Sfh regulatory networks in Salmonella Typhimurium identifies a plasmid-encoded transcription silencing mechanism | Q46192581 | ||
A DNA segment encoding the anticodon stem/loop of tRNA determines the specific recombination of integrative-conjugative elements in Acidithiobacillus species | Q46255535 | ||
Fis binding to the recombinational enhancer of the Hin DNA inversion system | Q46367418 | ||
Selective repression by Fis and H-NS at the Escherichia coli dps promoter. | Q46386594 | ||
The nucleoid binding protein H-NS acts as an anti-channeling factor to favor intermolecular Tn10 transposition and dissemination | Q46811372 | ||
Visualizing the assembly and disassembly mechanisms of the MuB transposition targeting complex | Q47209889 | ||
The effect of host-encoded nucleoid proteins on transposition: H-NS influences targeting of both IS903 and Tn10. | Q47640931 | ||
An H-NS-like stealth protein aids horizontal DNA transmission in bacteria | Q50074297 | ||
H-NS, the genome sentinel | Q50074672 | ||
Genetic and biochemical interactions between the bacterial replication initiator DnaA and the nucleoid-associated protein Rok in Bacillus subtilis. | Q50350067 | ||
Multiscale Structuring of the E. coli Chromosome by Nucleoid-Associated and Condensin Proteins. | Q52390782 | ||
DNA relaxation-dependent phase biasing of the fim genetic switch in Escherichia coli depends on the interplay of H-NS, IHF and LRP. | Q52596689 | ||
Proteome and acylome analyses of the functional interaction network between the carbazole-degradative plasmid pCAR1 and host Pseudomonas putida KT2440. | Q52638780 | ||
Fine-tuned growth phase control of dps, encoding a DNA protection protein, by FIS and H-NS. | Q53481360 | ||
IHF-dependent activation of P1 plasmid origin by dnaA. | Q53585292 | ||
Regulation of the integrase and cassette promoters of the class 1 integron by nucleoid-associated proteins. | Q54356669 | ||
Escherichia coli DnaA interacts with HU in initiation at the E. coli replication origin. | Q54428283 | ||
The role of H-NS in silencing F transfer gene expression during entry into stationary phase. | Q54497557 | ||
YdgT, the Hha paralogue in Escherichia coli, forms heteromeric complexes with H-NS and StpA. | Q54498518 | ||
Mechanism of transcriptional activation by FIS: role of core promoter structure and DNA topology. | Q54521059 | ||
Mutations in HU and IHF affect bacteriophage T4 growth: HimD subunits of IHF appear to function as homodimers. | Q54608697 | ||
Autoregulatory expression of the Escherichia coli hns gene encoding a nucleoid protein: H-NS functions as a repressor of its own transcription. | Q54664095 | ||
Histone-like proteins are required for cell growth and constraint of supercoils in DNA. | Q54668049 | ||
Molecular analysis of the Escherichia coli has gene encoding a DNA-binding protein, which preferentially recognizes curved DNA sequences | Q54689751 | ||
Bent DNA is needed for recombinational enhancer activity in the site-specific recombination system Cin of bacteriophage P1. The role of FIS protein. | Q54733997 | ||
Tn10 transposition and circle formation in vitro. | Q54760105 | ||
Host protein requirements for in vitro site-specific DNA inversion. | Q54776760 | ||
Modulation of H-NS transcriptional silencing by magnesium. | Q55396277 | ||
Post-translational modification of nucleoid-associated proteins: an extra layer of functional modulation in bacteria? | Q57033829 | ||
Bacterial chromosome organization and segregation | Q57143652 | ||
ICEberg 2.0: an updated database of bacterial integrative and conjugative elements | Q58587046 | ||
Impact of Chromosomal Architecture on the Function and Evolution of Bacterial Genomes | Q58700745 | ||
Regulatory Hierarchies Controlling Virulence Gene Expression in and | Q59341045 | ||
The Type IV Secretion System of ICE1: Formation of a Conjugative Pilus in | Q64235915 | ||
Differential functional properties of chromosomal- and plasmid-encoded H-NS proteins | Q64449053 | ||
Coupling of Escherichia coli hns mRNA levels to DNA synthesis by autoregulation: implications for growth phase control | Q70989505 | ||
The expression of the Escherichia coli fis gene is strongly dependent on the superhelical density of DNA | Q73072736 | ||
Twelve species of the nucleoid-associated protein from Escherichia coli. Sequence recognition specificity and DNA binding affinity | Q73157405 | ||
Three-way interactions among the Sfh, StpA and H-NS nucleoid-structuring proteins of Shigella flexneri 2a strain 2457T | Q73481709 | ||
Variation in HU composition during growth of Escherichia coli: the heterodimer is required for long term survival | Q73876610 | ||
Nucleoid proteins stimulate stringently controlled bacterial promoters: a link between the cAMP-CRP and the (p)ppGpp regulons in Escherichia coli | Q74244906 | ||
A novel ligand-binding domain involved in regulation of amino acid metabolism in prokaryotes | Q74512141 | ||
Requirement for the molecular adapter function of StpA at the Escherichia coli bgl promoter depends upon the level of truncated H-NS protein | Q77333826 | ||
Cooperative interactions between bacteriophage P2 integrase and its accessory factors IHF and Cox | Q81299023 | ||
Regulation of transcription by DNA supercoiling in Mycoplasma genitalium: global control in the smallest known self-replicating genome | Q84242829 | ||
Distribution of putative xenogeneic silencers in prokaryote genomes | Q85746314 | ||
Genome architecture and global gene regulation in bacteria: making progress towards a unified model? | Q86523950 | ||
Nucleoid-associated proteins encoded on plasmids: Occurrence and mode of function | Q87264184 | ||
Differential protein-protein binding affinities of H-NS family proteins encoded on the chromosome of Pseudomonas putida KT2440 and IncP-7 plasmid pCAR1 | Q89166977 | ||
Growth Phase-Dependent Chromosome Condensation and Heat-Stable Nucleoid-Structuring Protein Redistribution in Escherichia coli under Osmotic Stress | Q93086010 | ||
P304 | page(s) | 746-756 | |
P577 | publication date | 2019-06-14 | |
P1433 | published in | Computational and Structural Biotechnology Journal | Q19865804 |
P1476 | title | Endogenous and Foreign Nucleoid-Associated Proteins of Bacteria: Occurrence, Interactions and Effects on Mobile Genetic Elements and Host's Biology | |
P478 | volume | 17 |