Positive regulatory dynamics by a small noncoding RNA: speeding up responses under temperature stress.

scientific article published on 28 March 2012

Positive regulatory dynamics by a small noncoding RNA: speeding up responses under temperature stress. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1039/C2MB05479E
P698PubMed publication ID22456827
P5875ResearchGate publication ID223136638

P50authorVéronique ArluisonQ60981362
P2093author name stringRaúl Guantes
Bastien Cayrol
Florent Busi
P2860cites workHfq is necessary for regulation by the untranslated RNA DsrAQ24548921
A small RNA acts as an antisilencer of the H-NS-silenced rcsA gene of Escherichia coliQ24563821
Nature, nurture, or chance: stochastic gene expression and its consequencesQ24610764
Intrinsic noise in gene regulatory networksQ24630461
DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcriptionQ24645477
A trans-acting RNA as a control switch in Escherichia coli: DsrA modulates function by forming alternative structuresQ24652762
SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decayQ24669800
Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coliQ24684800
Regulation by small RNAs in bacteria: expanding frontiersQ27009044
Riboregulation by DsrA RNA: trans-actions for global economyQ28140236
Temperature sensing by the dsrA promoterQ28181441
Signal transduction cascade for regulation of RpoS: temperature regulation of DsrAQ28200768
Auto-assembly as a new regulatory mechanism of noncoding RNAQ28235332
Auto-assembly of E. coli DsrA small noncoding RNA: Molecular characteristics and functional consequencesQ28248938
The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio choleraeQ28270975
Integrating anaerobic/aerobic sensing and the general stress response through the ArcZ small RNAQ28289704
Turn-over of the small non-coding RNA RprA in E. coli is influenced by osmolarityQ28290812
Involvement of a novel transcriptional activator and small RNA in post-transcriptional regulation of the glucose phosphoenolpyruvate phosphotransferase systemQ28291273
Cycling of the Sm-like protein Hfq on the DsrA small regulatory RNAQ28294752
The small RNA RyhB activates the translation of shiA mRNA encoding a permease of shikimate, a compound involved in siderophore synthesisQ28304722
Quantitative characteristics of gene regulation by small RNAQ28469313
Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single CellsQ29039105
Hfq and its constellation of RNAQ29615791
Stochasticity in gene expression: from theories to phenotypesQ29617360
RNase E-based ribonucleoprotein complexes: mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAsQ29619938
Speed, sensitivity, and bistability in auto-activating signaling circuitsQ34085589
The RpoS-mediated general stress response in Escherichia coliQ34189650
Mechanism of positive regulation by DsrA and RprA small noncoding RNAs: pairing increases translation and protects rpoS mRNA from degradationQ34192636
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MicroRNAs can generate thresholds in target gene expressionQ34209703
Characterization of broadly pleiotropic phenotypes caused by an hfq insertion mutation in Escherichia coli K-12.Q34327163
Dynamic competition of DsrA and rpoS fragments for the proximal binding site of Hfq as a means for efficient annealingQ35088012
Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli: intracellular levels of sigma 70 and sigma 38Q35599258
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Dynamic features of gene expression control by small regulatory RNAs.Q37249990
Small regulatory non-coding RNAs in bacteria: physiology and mechanistic aspectsQ37348337
Nucleoid-associated proteins and bacterial physiology.Q37402014
Computational prediction of sRNAs and their targets in bacteria.Q37671500
Competition among Hfq-binding small RNAs in Escherichia coliQ38469100
Regulation of Escherichia coli starvation sigma factor (sigma s) by ClpXP proteaseQ39839940
A regulatory trade-off as a source of strain variation in the species Escherichia coliQ40001101
Polypeptide-chain-elongation rate in Escherichia coli B/r as a function of growth rateQ42538522
The influence of Hfq and ribonucleases on the stability of the small non-coding RNA OxyS and its target rpoS in E. coli is growth phase dependent.Q43909797
A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutatorQ48047346
How old are RNA networks?Q51585517
Theoretical analysis of catalytic-sRNA-mediated gene silencing.Q54429133
Exact stochastic simulation of coupled chemical reactionsQ56536017
P433issue6
P304page(s)1707-1715
P577publication date2012-03-28
P1433published inMolecular BioSystemsQ3319467
P1476titlePositive regulatory dynamics by a small noncoding RNA: speeding up responses under temperature stress.
P478volume8

Reverse relations

cites work (P2860)
Q37349225A Prophage-Encoded Small RNA Controls Metabolism and Cell Division in Escherichia coli
Q34504403Dynamic and structural constraints in signal propagation by regulatory networks.
Q38935351Paradoxical suppression of small RNA activity at high Hfq concentrations due to random-order binding
Q54278546Riboregulation of the bacterial actin-homolog MreB by DsrA small noncoding RNA.
Q37473055The dual role of DksA protein in the regulation of Escherichia coli pArgX promoter.
Q37268254Transcription factor levels enable metabolic diversification of single cells of environmental bacteria
Q37051423Twins, quadruplexes, and more: functional aspects of native and engineered RNA self-assembly in vivo

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