Integrating anaerobic/aerobic sensing and the general stress response through the ArcZ small RNA

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Integrating anaerobic/aerobic sensing and the general stress response through the ArcZ small RNA is …
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scholarly articleQ13442814

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P356DOI10.1038/EMBOJ.2010.179
P8608Fatcat IDrelease_s34t6hpznbclllmzsbxjelrgay
P3181OpenCitations bibliographic resource ID3446215
P932PMC publication ID2944060
P698PubMed publication ID20683441
P5875ResearchGate publication ID45494778

P50authorSusan GottesmanQ19642513
Pierre MandinQ58327583
P2860cites workDeep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, HfqQ21145046
Two seemingly homologous noncoding RNAs act hierarchically to activate glmS mRNA translationQ21145881
A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coliQ24536169
Hfq-dependent regulation of OmpA synthesis is mediated by an antisense RNA.Q24536474
The small RNA, DsrA, is essential for the low temperature expression of RpoS during exponential growth in Escherichia coliQ24562141
GadY, a small-RNA regulator of acid response genes in Escherichia coliQ24563573
MicC, a second small-RNA regulator of Omp protein expression in Escherichia coliQ24563596
A unique mechanism regulating gene expression: translational inhibition by a complementary RNA transcript (micRNA)Q24594977
Regulatory RNAs in bacteriaQ24595082
Identification of novel small RNAs using comparative genomics and microarraysQ24601229
Reprogramming of anaerobic metabolism by the FnrS small RNAQ24606364
MicA sRNA links the PhoP regulon to cell envelope stressQ24629569
RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteriaQ24641843
Efficient translation of the RpoS sigma factor in Salmonella typhimurium requires host factor I, an RNA-binding protein encoded by the hfq geneQ24643457
DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcriptionQ24645477
Riboregulation in Escherichia coli: DsrA RNA acts by RNA:RNA interactions at multiple lociQ24645507
Spot 42 RNA mediates discoordinate expression of the E. coli galactose operonQ24674172
Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coliQ24684800
Translational control and target recognition by Escherichia coli small RNAs in vivoQ24684847
The gcvB gene encodes a small untranslated RNA involved in expression of the dipeptide and oligopeptide transport systems in Escherichia coliQ28145321
Global analysis of small RNA and mRNA targets of HfqQ28184898
Small non-coding RNAs, co-ordinators of adaptation processes in Escherichia coli: the RpoS paradigmQ28204689
Regulation of RpoS by a novel small RNA: the characterization of RprAQ28204998
Novel small RNA-encoding genes in the intergenic regions of Escherichia coliQ28205853
Regulation and mode of action of the second small RNA activator of RpoS translation, RprAQ28212671
Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymeraseQ28220384
Genetic evidence that DicF, a second division inhibitor encoded by the Escherichia coli dicB operon, is probably RNAQ28238977
A genetic approach for finding small RNAs regulators of genes of interest identifies RybC as regulating the DpiA/DpiB two-component systemQ28244233
Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNAQ28257497
Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesisQ28275777
Remodelling of the Escherichia coli outer membrane by two small regulatory RNAsQ28287313
The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNAQ28288672
Involvement of a novel transcriptional activator and small RNA in post-transcriptional regulation of the glucose phosphoenolpyruvate phosphotransferase systemQ28291273
Effect of Hfq on RprA-rpoS mRNA pairing: Hfq-RNA binding and the influence of the 5' rpoS mRNA leader regionQ28295584
A small bacterial RNA regulates a putative ABC transporterQ28299894
The small RNA regulators of Escherichia coli: roles and mechanisms*Q29618536
SigmaE regulates and is regulated by a small RNA in Escherichia coliQ33281445
A PhoQ/P-regulated small RNA regulates sensitivity of Escherichia coli to antimicrobial peptidesQ33738360
The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) proteinQ33889724
Positive regulation by small RNAs and the role of HfqQ34006620
The RNA-binding protein HF-I, known as a host factor for phage Qbeta RNA replication, is essential for rpoS translation in Escherichia coliQ34383062
Modulating RssB activity: IraP, a novel regulator of sigma(S) stability in Escherichia coliQ34649165
Experimental approaches for the discovery and characterization of regulatory small RNA.Q35003330
Genetic evidence suggests that the intergenic region between pstA and pstB plays a role in the regulation of rpoS translation during phosphate limitationQ35634595
A rapid and convenient method for the preparation and storage of competent bacterial cellsQ36001361
Signaling by the arc two-component system provides a link between the redox state of the quinone pool and gene expressionQ36505590
Small RNA regulators and the bacterial response to stressQ36668567
Hfq structure, function and ligand bindingQ36774884
The Crp-activated small noncoding regulatory RNA CyaR (RyeE) links nutritional status to group behaviorQ37051352
Identification of a quinone-sensitive redox switch in the ArcB sensor kinase.Q37513333
Involvement of ArcA and Fnr in expression of Escherichia coli thiol peroxidase geneQ38312642
A two-component phosphotransfer network involving ArcB, ArcA, and RssB coordinates synthesis and proteolysis of sigmaS (RpoS) in E. coliQ39705576
Sequential recognition of two distinct sites in sigma(S) by the proteolytic targeting factor RssB and ClpX.Q39832015
Identification of transcriptional start sites and the role of ppGpp in the expression of rpoS, the structural gene for the sigma S subunit of RNA polymerase in Escherichia coliQ39837959
Mutations that increase expression of the rpoS gene and decrease its dependence on hfq function in Salmonella typhimuriumQ39844182
Constitutive Activation of the Escherichia coli Pho Regulon Upregulates rpoS Translation in an Hfq-Dependent FashionQ39997770
Aerobic-anaerobic gene regulation in Escherichia coli: control by the ArcAB and Fnr regulonsQ40592273
Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivityQ41863185
Quinones as the redox signal for the arc two-component system of bacteriaQ43652042
Instability of sensory histidine kinase mRNAs in Escherichia coliQ44311627
Enolase in the RNA degradosome plays a crucial role in the rapid decay of glucose transporter mRNA in the response to phosphosugar stress in Escherichia coliQ45135642
Effect of ArcA and FNR on the expression of genes related to the oxygen regulation and the glycolysis pathway in Escherichia coli under microaerobic growth conditionsQ46575979
A weight matrix for binding recognition by the redox-response regulator ArcA-P of Escherichia coliQ47266505
A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutatorQ48047346
Transcriptional regulation of the proton translocating NADH dehydrogenase genes (nuoA-N) of Escherichia coli by electron acceptors, electron donors and gene regulatorsQ48074225
Multiple pathways for regulation of sigmaS (RpoS) stability in Escherichia coli via the action of multiple anti-adaptorsQ50063012
On the facultative requirement of the bacterial RNA chaperone, Hfq.Q54399076
Effect of chelating agents and respiratory inhibitors on regulation of the cadA gene in Escherichia coli.Q54568794
Down-regulation of porins by a small RNA bypasses the essentiality of the regulated intramembrane proteolysis protease RseP in Escherichia coliQ82713385
P433issue18
P407language of work or nameEnglishQ1860
P304page(s)3094-107
P577publication date2010-09-15
P1433published inThe EMBO JournalQ1278554
P1476titleIntegrating anaerobic/aerobic sensing and the general stress response through the ArcZ small RNA
P478volume29

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