Identification of transcriptional start sites and the role of ppGpp in the expression of rpoS, the structural gene for the sigma S subunit of RNA polymerase in Escherichia coli

scientific article published on August 1, 1995

Identification of transcriptional start sites and the role of ppGpp in the expression of rpoS, the structural gene for the sigma S subunit of RNA polymerase in Escherichia coli is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1128/JB.177.16.4676-4680.1995
P953full work available at URLhttp://jb.asm.org/cgi/content/abstract/177/16/4676
https://europepmc.org/articles/pmc177232?pdf=render
https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/7642494/?tool=EBI
https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/7642494/pdf/?tool=EBI
https://europepmc.org/articles/PMC177232
https://europepmc.org/articles/PMC177232?pdf=render
https://journals.asm.org/doi/pdf/10.1128/jb.177.16.4676-4680.1995
P932PMC publication ID177232
P698PubMed publication ID7642494

P2093author name stringR. Hengge-Aronis
R. Lange
D. Fischer
P2860cites workIdentification of a central regulator of stationary-phase gene expression inEscherichia coliQ27976519
A gene at 59 minutes on the Escherichia coli chromosome encodes a lipoprotein with unusual amino acid repeat sequencesQ36105971
Synthesis of the stationary-phase sigma factor sigma s is positively regulated by ppGppQ36124805
A collection of strains containing genetically linked alternating antibiotic resistance elements for genetic mapping of Escherichia coli.Q37055071
The putative sigma factor KatF is regulated posttranscriptionally during carbon starvationQ39927181
KatF (sigma S) synthesis in Escherichia coli is subject to posttranscriptional regulationQ39927187
Regulation of katF and katE in Escherichia coli K-12 by weak acidsQ39935387
Regulation of transcription of katE and katF in Escherichia coliQ39951956
cis-acting sites required for osmoregulation of ompF expression in Escherichia coli K-12.Q39961784
The role of the sigma factor sigma S (KatF) in bacterial global regulationQ40572983
A gene involved in the metabolic control of ppGpp synthesisQ40860900
Survival of hunger and stress: the role of rpoS in early stationary phase gene regulation in E. coliQ40871460
The nlpD gene is located in an operon with rpoS on the Escherichia coli chromosome and encodes a novel lipoprotein with a potential function in cell wall formationQ42494262
Structure of the 5' upstream region and the regulation of the rpoS gene of Escherichia coliQ42607498
The cellular concentration of the sigma S subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stabilityQ54631609
Decreasing transcription elongation rate in Escherichia coli exposed to amino acid starvationQ54675385
Residual guanosine 3',5'-bispyrophosphate synthetic activity of relA null mutants can be eliminated by spoT null mutationsQ70119536
Functional interactions between translation, transcription and ppGpp in growing Escherichia coliQ72697137
P433issue16
P407language of work or nameEnglishQ1860
P921main subjectEscherichia coliQ25419
transcriptionQ177900
bacterial gene expression regulationQ71131082
P304page(s)4676-4680
P577publication date1995-08-01
P1433published inJournal of BacteriologyQ478419
P1476titleIdentification of transcriptional start sites and the role of ppGpp in the expression of rpoS, the structural gene for the sigma S subunit of RNA polymerase in Escherichia coli
P478volume177

Reverse relations

cites work (P2860)
Q360626265-azacytidine induces transcriptome changes in Escherichia coli via DNA methylation-dependent and DNA methylation-independent mechanisms
Q39714281A cka-gfp transcriptional fusion reveals that the colicin K activity gene is induced in only 3 percent of the population
Q34933421A regulatory feedback loop between RpoS and SpoT supports the survival of Legionella pneumophila in water.
Q39705576A two-component phosphotransfer network involving ArcB, ArcA, and RssB coordinates synthesis and proteolysis of sigmaS (RpoS) in E. coli
Q41655685Adaptation of gene expression in stationary phase bacteria
Q35012153Aging in bacteria
Q37872826An overview of molecular stress response mechanisms in Escherichia coli contributing to survival of Shiga toxin-producing Escherichia coli during raw milk cheese production
Q33991276Analysis of rpoS mRNA in Salmonella dublin: identification of multiple transcripts with growth-phase-dependent variation in transcript stability
Q39678885Bacillus subtilis functional genomics: global characterization of the stringent response by proteome and transcriptome analysis.
Q41730605Bacterial metabolism in dental biofilms
Q47162296Cell-free protein synthesis from non-growing, stressed Escherichia coli
Q39678018Characterization of a Legionella pneumophila relA insertion mutant and toles of RelA and RpoS in virulence gene expression.
Q34008557Characterization of a stress-induced alternate sigma factor, RpoS, of Coxiella burnetii and its expression during the development cycle
Q40211943Classification and strength measurement of stationary-phase promoters by use of a newly developed promoter cloning vector
Q34052840Cloning of rel from Listeria monocytogenes as an osmotolerance involvement gene
Q43674779Codon-usage based regulation of colicin K synthesis by the stress alarmone ppGpp.
Q44655622ComX is a unique link between multiple quorum sensing outputs and competence in Streptococcus pneumoniae
Q24600915Commensal effect of pectate lyases secreted from Dickeya dadantii on proliferation of Escherichia coli O157:H7 EDL933 on lettuce leaves
Q47865400Competitiveness in root colonization by Pseudomonas putida requires the rpoS gene
Q35092128Conditional senescence in bacteria: death of the immortals
Q39564563Constricted flux through the branched-chain amino acid biosynthetic enzyme acetolactate synthase triggers elevated expression of genes regulated by rpoS and internal acidification.
Q35012637Contribution of proton-translocating proteins to the virulence of Salmonella enterica serovars Typhimurium, Gallinarum, and Dublin in chickens and mice.
Q35161491Control of rpoS transcription in Escherichia coli and Pseudomonas: why so different?
Q77765524Cross-induction of glc and ace operons of Escherichia coli attributable to pathway intersection. Characterization of the glc promoter
Q40024302Cyclopropane ring formation in membrane lipids of bacteria.
Q36026801DNA supercoiling - a global transcriptional regulator for enterobacterial growth?
Q41096428Developmental programs in bacteria.
Q42713671Discretely calibrated regulatory loops controlled by ppGpp partition gene induction across the 'feast to famine' gradient in Escherichia coli
Q34316573DksA affects ppGpp induction of RpoS at a translational level
Q46276966DksA and ppGpp Regulate the σS Stress Response by Activating Promoters for the Small RNA DsrA and the Anti-Adapter Protein IraP.
Q42381143Effect of Global Regulators RpoS and Cyclic-AMP/CRP on the Catabolome and Transcriptome of Escherichia coli K12 during Carbon- and Energy-Limited Growth
Q39493829Effect of ppGpp on Escherichia coli cyclopropane fatty acid synthesis is mediated through the RpoS sigma factor (sigmaS).
Q24643457Efficient translation of the RpoS sigma factor in Salmonella typhimurium requires host factor I, an RNA-binding protein encoded by the hfq gene
Q34124406Escherichia coli starvation diets: essential nutrients weigh in distinctly
Q34580258Expression of spoT in Borrelia burgdorferi during serum starvation
Q42068290Fis regulates transcriptional induction of RpoS in Salmonella enterica
Q34643555General stress response regulator RpoS in adaptive mutation and amplification in Escherichia coli
Q37426840Genetic evidence that Legionella pneumophila RpoS modulates expression of the transmission phenotype in both the exponential phase and the stationary phase
Q38330505Genome-wide analyses of Escherichia coli gene expression responsive to the BaeSR two-component regulatory system
Q39743744Global analysis of genes regulated by EvgA of the two-component regulatory system in Escherichia coli
Q41594906Global analysis of physiological responses in marine bacteria
Q42688985Growth phase and (p)ppGpp control of IraD, a regulator of RpoS stability, in Escherichia coli
Q35937169Growth versus maintenance: a trade-off dictated by RNA polymerase availability and sigma factor competition?
Q54519524H-NS and Lrp serve as positive modulators of traJ expression from the Escherichia coli plasmid pRK100.
Q39569179Identification and characterization of the Erwinia amylovora rpoS gene: RpoS is not involved in induction of fireblight disease symptoms
Q39734899Identification of an unknown promoter, OUTIIp, within the IS10R element.
Q39568776Identification of conserved, RpoS-dependent stationary-phase genes of Escherichia coli.
Q35611501Identification of sigma S-regulated genes in Salmonella typhimurium: complementary regulatory interactions between sigma S and cyclic AMP receptor protein
Q33280033Impact of the rpoS genotype for acid resistance patterns of pathogenic and probiotic Escherichia coli
Q31727492Induction of ppGpp synthesis in Streptomyces coelicolor A3(2) grown under conditions of nutritional sufficiency elicits actII-ORF4 transcription and actinorhodin biosynthesis.
Q36589716Inorganic polyphosphate and the induction of rpoS expression
Q28289704Integrating anaerobic/aerobic sensing and the general stress response through the ArcZ small RNA
Q42128041Inverse regulatory coordination of motility and curli-mediated adhesion in Escherichia coli
Q74291559Involvement of inorganic polyphosphate in expression of SOS genes
Q44597047Involvement of rpoS in the survival of Escherichia coli in the viable but non‐culturable state
Q33320279Isolation and characterization of transposon-insertional mutants from Paenibacillus polymyxa E681 altering the biosynthesis of indole-3-acetic acid
Q41174217Lactococcus lactis and stress
Q43619488LeuO expression in response to starvation for branched-chain amino acids
Q24679480Limited role for the DsrA and RprA regulatory RNAs in rpoS regulation in Salmonella enterica
Q34192636Mechanism of positive regulation by DsrA and RprA small noncoding RNAs: pairing increases translation and protects rpoS mRNA from degradation
Q34122177Modulation of Borrelia burgdorferi stringent response and gene expression during extracellular growth with tick cells
Q39844182Mutations that increase expression of the rpoS gene and decrease its dependence on hfq function in Salmonella typhimurium
Q43906223Non-destructive monitoring of rpoS promoter activity as stress marker for evaluating cellular physiological status
Q39705833Plasmid DNA supercoiling and gyrase activity in Escherichia coli wild-type and rpoS stationary-phase cells.
Q33392409Pleiotropic effects of a rel mutation on stress survival of Rhizobium etli CNPAF512.
Q28740924Polyphosphate--an ancient energy source and active metabolic regulator
Q39840619Posttranscriptional osmotic regulation of the sigma(s) subunit of RNA polymerase in Escherichia coli
Q39567505Promoter substitution and deletion analysis of upstream region required for rpoS translational regulation.
Q39734780Quorum-sensing system and stationary-phase sigma factor (rpoS) of the onion pathogen Burkholderia cepacia genomovar I type strain, ATCC 25416.
Q39839940Regulation of Escherichia coli starvation sigma factor (sigma s) by ClpXP protease
Q28204998Regulation of RpoS by a novel small RNA: the characterization of RprA
Q39503787Regulation of rpoS gene expression in Pseudomonas: involvement of a TetR family regulator
Q24675316Regulation of sigma factor competition by the alarmone ppGpp
Q41762424RelA-dependent (p)ppGpp production controls exoenzyme synthesis in Erwinia carotovora subsp. atroseptica
Q44816157Relative stability of DNA as a generic criterion for promoter prediction: whole genome annotation of microbial genomes with varying nucleotide base composition
Q40584853Role of histone-like protein H-NS in multidrug resistance of Escherichia coli
Q39680255Role of ppGpp in rpoS stationary-phase regulation in Escherichia coli
Q32115865Role of rpoS in stress survival and virulence of Vibrio cholerae
Q34564918Role of sigmaD in regulating genes and signals during Myxococcus xanthus development
Q33733708RpoS (sigma-S) controls expression of rsmA, a global regulator of secondary metabolites, harpin, and extracellular proteins in Erwinia carotovora
Q43636755RpoS co-operates with other factors to induce Legionella pneumophila virulence in the stationary phase
Q46833743RpoS regulation of gene expression during exponential growth of Escherichia coli K12.
Q28220384Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase
Q43121907Similar and divergent effects of ppGpp and DksA deficiencies on transcription in Escherichia coli
Q24651398Small noncoding RNA GcvB is a novel regulator of acid resistance in Escherichia coli
Q33700399Starvation for different nutrients in Escherichia coli results in differential modulation of RpoS levels and stability
Q35610275Starvation-induced expression of retron-Ec107 and the role of ppGpp in multicopy single-stranded DNA production
Q37710717Stationary phase in gram-negative bacteria.
Q34548631Stress responses go three dimensional - the spatial order of physiological differentiation in bacterial macrocolony biofilms
Q40459862Stress-Induced Mutagenesis.
Q40882993The LetE protein enhances expression of multiple LetA/LetS-dependent transmission traits by Legionella pneumophila
Q33504150The NlpD lipoprotein is a novel Yersinia pestis virulence factor essential for the development of plague
Q46465470The Production of Curli Amyloid Fibers Is Deeply Integrated into the Biology of Escherichia coli.
Q34189650The RpoS-mediated general stress response in Escherichia coli
Q44928503The bacterial signal molecule, ppGpp, regulates Salmonella virulence gene expression
Q38280433The global role of ppGpp synthesis in morphological differentiation and antibiotic production in Streptomyces coelicolor A3(2)
Q36812721The i6A37 tRNA modification is essential for proper decoding of UUX-Leucine codons during rpoS and iraP translation
Q43936637The interaction between sigmaS, the stationary phase sigma factor, and the core enzyme of Escherichia coli RNA polymerase
Q44209223The role of the alarmone (p)ppGpp in sigma N competition for core RNA polymerase.
Q28288672The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNA
Q39798896The stringent response controls catalases in Pseudomonas aeruginosa and is required for hydrogen peroxide and antibiotic tolerance
Q36421860Transcription profiling of the stringent response in Escherichia coli
Q42426785Transcription regulation of the Escherichia coli pcnB gene coding for poly(A) polymerase I: roles of ppGpp, DksA and sigma factors
Q39548009Transcription regulation of the colicin K cka gene reveals induction of colicin synthesis by differential responses to environmental signals.
Q35619638Variation in RNA polymerase sigma subunit composition within different stocks of Escherichia coli W3110.
Q39493024Variation in resistance to high hydrostatic pressure and rpoS heterogeneity in natural isolates of Escherichia coli O157:H7.
Q37142677Vibrio vulnificus rpoS expression is repressed by direct binding of cAMP-cAMP receptor protein complex to its two promoter regions.
Q43544098What makes an Escherichia coli promoter sigma(S) dependent? Role of the -13/-14 nucleotide promoter positions and region 2.5 of sigma(S).
Q35124312relA enhances the adherence of enteropathogenic Escherichia coli

Search more.