| scholarly article | Q13442814 |
| P50 | author | Susan Gottesman | Q19642513 |
| P2093 | author name string | Kyung Moon | |
| P2860 | cites work | Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq | Q21145046 |
| Predicted structure and phyletic distribution of the RNA-binding protein Hfq. | Q24537811 | ||
| Hfq is necessary for regulation by the untranslated RNA DsrA | Q24548921 | ||
| Regulatory RNAs in bacteria | Q24595082 | ||
| The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli | Q24622607 | ||
| A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language? | Q24629627 | ||
| RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteria | Q24641843 | ||
| DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcription | Q24645477 | ||
| Caught at its own game: regulatory small RNA inactivated by an inducible transcript mimicking its target | Q24647466 | ||
| Spot 42 RNA mediates discoordinate expression of the E. coli galactose operon | Q24674172 | ||
| Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli | Q24684800 | ||
| Temperature sensing by the dsrA promoter | Q28181441 | ||
| Global analysis of small RNA and mRNA targets of Hfq | Q28184898 | ||
| Signal transduction cascade for regulation of RpoS: temperature regulation of DsrA | Q28200768 | ||
| Regulation of RpoS by a novel small RNA: the characterization of RprA | Q28204998 | ||
| A conserved small RNA promotes silencing of the outer membrane protein YbfM | Q28243094 | ||
| Small RNAs endow a transcriptional activator with essential repressor functions for single-tier control of a global stress regulon | Q28243536 | ||
| A genetic approach for finding small RNAs regulators of genes of interest identifies RybC as regulating the DpiA/DpiB two-component system | Q28244233 | ||
| Switching off small RNA regulation with trap-mRNA | Q28255082 | ||
| Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNA | Q28257497 | ||
| Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis | Q28275777 | ||
| Integrating anaerobic/aerobic sensing and the general stress response through the ArcZ small RNA | Q28289704 | ||
| An efficient recombination system for chromosome engineering in Escherichia coli | Q29615038 | ||
| Hfq and its constellation of RNA | Q29615791 | ||
| The small RNA regulators of Escherichia coli: roles and mechanisms* | Q29618536 | ||
| A PhoQ/P-regulated small RNA regulates sensitivity of Escherichia coli to antimicrobial peptides | Q33738360 | ||
| The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) protein | Q33889724 | ||
| Disruption of small RNA signaling caused by competition for Hfq. | Q34508819 | ||
| Deep sequencing of Salmonella RNA associated with heterologous Hfq proteins in vivo reveals small RNAs as a major target class and identifies RNA processing phenotypes | Q34971662 | ||
| Role of polynucleotide phosphorylase in sRNA function in Escherichia coli | Q34985832 | ||
| Experimental approaches for the discovery and characterization of regulatory small RNA. | Q35003330 | ||
| Translational regulation of the Escherichia coli stress factor RpoS: a role for SsrA and Lon | Q35879388 | ||
| Regulation of the Escherichia coli hfq gene encoding the host factor for phage Q beta | Q36104877 | ||
| Hfq structure, function and ligand binding | Q36774884 | ||
| The Crp-activated small noncoding regulatory RNA CyaR (RyeE) links nutritional status to group behavior | Q37051352 | ||
| Computational prediction of sRNAs and their targets in bacteria. | Q37671500 | ||
| Induction of expression of hfq by DksA is essential for Shigella flexneri virulence | Q40223748 | ||
| A transient heterochromatic state in Xist preempts X inactivation choice without RNA stabilization | Q40310454 | ||
| RNAs actively cycle on the Sm-like protein Hfq. | Q41429696 | ||
| The influence of Hfq and ribonucleases on the stability of the small non-coding RNA OxyS and its target rpoS in E. coli is growth phase dependent. | Q43909797 | ||
| Down-regulation of outer membrane proteins by noncoding RNAs: unraveling the cAMP-CRP- and sigmaE-dependent CyaR-ompX regulatory case. | Q45958746 | ||
| A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutator | Q48047346 | ||
| Despite similar binding to the Hfq protein regulatory RNAs widely differ in their competition performance. | Q50109326 | ||
| P433 | issue | 6 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | Escherichia coli | Q25419 |
| P304 | page(s) | 1545-1562 | |
| P577 | publication date | 2011-11-20 | |
| P1433 | published in | Molecular Microbiology | Q6895967 |
| P1476 | title | Competition among Hfq-binding small RNAs in Escherichia coli | |
| P478 | volume | 82 |
| Q37349225 | A Prophage-Encoded Small RNA Controls Metabolism and Cell Division in Escherichia coli |
| Q47400265 | A bacterial three-hybrid assay detects Escherichia coli Hfq-sRNA interactions in vivo |
| Q41949572 | A cis-encoded sRNA, Hfq and mRNA secondary structure act independently to suppress IS200 transposition |
| Q34296188 | A complex network of small non-coding RNAs regulate motility in Escherichia coli |
| Q35036974 | A qrr noncoding RNA deploys four different regulatory mechanisms to optimize quorum-sensing dynamics. |
| Q36172268 | Alternative Hfq-sRNA interaction modes dictate alternative mRNA recognition |
| Q48194060 | Alternative pathways for Escherichia coli biofilm formation revealed by sRNA overproduction. |
| Q34033315 | An atlas of Hfq-bound transcripts reveals 3' UTRs as a genomic reservoir of regulatory small RNAs |
| Q42696570 | Antagonistic functions between the RNA chaperone Hfq and an sRNA regulate sensitivity to the antibiotic colicin |
| Q34325200 | Bacterial small RNA-based negative regulation: Hfq and its accomplices |
| Q37346798 | C-terminal domain of the RNA chaperone Hfq drives sRNA competition and release of target RNA. |
| Q34297869 | Communication, cooperation, and social interactions: a report from the third Young Microbiologists Symposium on microbe signalling, organisation, and pathogenesis |
| Q34540586 | Competing endogenous RNAs: a target-centric view of small RNA regulation in bacteria |
| Q37151759 | Complex transcriptional and post-transcriptional regulation of an enzyme for lipopolysaccharide modification |
| Q41516624 | Cross talk between ABC transporter mRNAs via a target mRNA-derived sponge of the GcvB small RNA |
| Q38087172 | Cycling of RNAs on Hfq. |
| Q39614417 | Direct comparison of small RNA and transcription factor signaling |
| Q64264203 | Diversity, versatility and complexity of bacterial gene regulation mechanisms: opportunities and drawbacks for applications in synthetic biology |
| Q38295541 | Domain swapping between homologous bacterial small RNAs dissects processing and Hfq binding determinants and uncovers an aptamer for conditional RNase E cleavage. |
| Q34229939 | Effects of the cryptochrome CryB from Rhodobacter sphaeroides on global gene expression in the dark or blue light or in the presence of singlet oxygen |
| Q36740865 | Exploring sRNA-mediated gene silencing mechanisms using artificial small RNAs derived from a natural RNA scaffold in Escherichia coli. |
| Q90318340 | Genetic identification of the functional surface for RNA binding by Escherichia coli ProQ |
| Q28241086 | Genome-wide identification of Hfq-regulated small RNAs in the fire blight pathogen Erwinia amylovora discovered small RNAs with virulence regulatory function |
| Q35160857 | Genome-wide profiling of Hfq-binding RNAs uncovers extensive post-transcriptional rewiring of major stress response and symbiotic regulons in Sinorhizobium meliloti. |
| Q40987473 | Hfq binds directly to the ribosome-binding site of IS10 transposase mRNA to inhibit translation |
| Q57260318 | Hfq chaperone brings speed dating to bacterial sRNA |
| Q47104096 | Hfq links translation repression to stress-induced mutagenesis in E. coli |
| Q54293188 | Hfq reduces envelope stress by controlling expression of envelope-localized proteins and protein complexes in enteropathogenic Escherichia coli. |
| Q42146755 | Hfq restructures RNA-IN and RNA-OUT and facilitates antisense pairing in the Tn10/IS10 system |
| Q64067281 | Hfq-dependent mRNA unfolding promotes sRNA-based inhibition of translation |
| Q38674091 | Hfq: a multifaceted RNA chaperone involved in virulence |
| Q90044685 | Hierarchy in Hfq Chaperon Occupancy of Small RNA Targets Plays a Major Role in Their Regulation |
| Q35620619 | How do base-pairing small RNAs evolve? |
| Q34740470 | Identifying and characterizing Hfq-RNA interactions |
| Q40631587 | Inhibition of Phagocytic Killing of Escherichia coli in Drosophila Hemocytes by RNA Chaperone Hfq. |
| Q38602982 | Intermolecular base stacking mediates RNA-RNA interaction in a crystal structure of the RNA chaperone Hfq. |
| Q38098474 | Licensing and due process in the turnover of bacterial RNA. |
| Q61804596 | Mechanism and physiological significance of autoregulation of the gene |
| Q90271711 | Mechanism for coordinate regulation of rpoS by sRNA-sRNA interaction in Escherichia coli |
| Q34811166 | Modification of the RpoS network with a synthetic small RNA. |
| Q34322538 | Mutations in interaction surfaces differentially impact E. coli Hfq association with small RNAs and their mRNA targets |
| Q38199289 | Ménage à trois: post-transcriptional control of the key enzyme for cell envelope synthesis by a base-pairing small RNA, an RNase adaptor protein, and a small RNA mimic |
| Q47296673 | OxyS small RNA induces cell cycle arrest to allow DNA damage repair |
| Q38935351 | Paradoxical suppression of small RNA activity at high Hfq concentrations due to random-order binding |
| Q51393409 | Positive regulatory dynamics by a small noncoding RNA: speeding up responses under temperature stress. |
| Q21144899 | Post-transcriptional control of the Escherichia coli PhoQ-PhoP two-component system by multiple sRNAs involves a novel pairing region of GcvB |
| Q57344163 | Post-transcriptional gene regulation by an Hfq-independent small RNA in Caulobacter crescentus |
| Q90560683 | Proteins That Chaperone RNA Regulation |
| Q38211777 | RNA binding by Hfq and ring-forming (L)Sm proteins: a trade-off between optimal sequence readout and RNA backbone conformation |
| Q21284531 | Rapid degradation of Hfq-free RyhB in Yersinia pestis by PNPase independent of putative ribonucleolytic complexes |
| Q41674655 | Regulation of Polyhydroxybutyrate Accumulation in Sinorhizobium meliloti by the Trans-Encoded Small RNA MmgR. |
| Q34534236 | Regulation of a polyamine transporter by the conserved 3' UTR-derived sRNA SorX confers resistance to singlet oxygen and organic hydroperoxides in Rhodobacter sphaeroides |
| Q35849677 | RelA protein stimulates the activity of RyhB small RNA by acting on RNA-binding protein Hfq. |
| Q26769016 | Riboregulation of bacterial and archaeal transposition |
| Q39321244 | Roles of Regulatory RNAs for Antibiotic Resistance in Bacteria and Their Potential Value as Novel Drug Targets |
| Q36709429 | Small RNA Regulation of TolC, the Outer Membrane Component of Bacterial Multidrug Transporters |
| Q28727846 | Small RNA binding to the lateral surface of Hfq hexamers and structural rearrangements upon mRNA target recognition |
| Q38230079 | Small RNAs in the control of RpoS, CsgD, and biofilm architecture of Escherichia coli |
| Q42330324 | Spot 42 sRNA regulates arabinose-inducible araBAD promoter activity by repressing synthesis of the high-affinity low-capacity arabinose transporter |
| Q38838084 | Stressing Escherichia coli to educate students about research: A CURE to investigate multiple levels of gene regulation. |
| Q42324804 | Structural flexibility of RNA as molecular basis for Hfq chaperone function |
| Q35131127 | Structural insights into the recognition of the internal A-rich linker from OxyS sRNA by Escherichia coli Hfq. |
| Q38093756 | Structure and RNA-binding properties of the bacterial LSm protein Hfq. |
| Q28081126 | Target activation by regulatory RNAs in bacteria |
| Q37545684 | The MiaA tRNA modification enzyme is necessary for robust RpoS expression in Escherichia coli |
| Q37425414 | The Phosphorolytic Exoribonucleases Polynucleotide Phosphorylase and RNase PH Stabilize sRNAs and Facilitate Regulation of Their mRNA Targets |
| Q39153160 | The Pseudomonas aeruginosa CrcZ RNA interferes with Hfq-mediated riboregulation |
| Q35882335 | The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pair |
| Q37995707 | The bacterial protein Hfq: much more than a mere RNA-binding factor |
| Q59798026 | The binding of Class II sRNA MgrR to two different sites on matchmaker protein Hfq enables efficient competition for Hfq and annealing to regulated mRNAs |
| Q26852007 | The interplay of Hfq, poly(A) polymerase I and exoribonucleases at the 3' ends of RNAs resulting from Rho-independent termination: A tentative model |
| Q34680602 | The putative oligosaccharide translocase SypK connects biofilm formation with quorum signaling in Vibrio fischeri. |
| Q26746091 | The role of mRNA structure in bacterial translational regulation |
| Q42600827 | Tn5 transposition in Escherichia coli is repressed by Hfq and activated by over-expression of the small non-coding RNA SgrS. |
| Q37210945 | Transcript degradation and noise of small RNA-controlled genes in a switch activated network in Escherichia coli |
| Q33837698 | TrmL and TusA Are Necessary for rpoS and MiaA Is Required for hfq Expression in Escherichia coli |
| Q92732858 | Trouble is coming: Signaling pathways that regulate general stress responses in bacteria |
| Q37210961 | sRNA roles in regulating transcriptional regulators: Lrp and SoxS regulation by sRNAs |
| Q41207283 | sRNA-Mediated Control of Transcription Termination in E. coli |
| Q24597091 | sRNAs and the virulence of Salmonella enterica serovar Typhimurium |
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