Target activation by regulatory RNAs in bacteria

scientific article

Target activation by regulatory RNAs in bacteria is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

External links are
P356DOI10.1093/FEMSRE/FUV016
P3181OpenCitations bibliographic resource ID2813203
P932PMC publication ID4542691
P698PubMed publication ID25934124
P5875ResearchGate publication ID275717362

P50authorKai PapenfortQ41716560
P2093author name stringC. K. Vanderpool
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Structural model of an mRNA in complex with the bacterial chaperone Hfq.Q34661444
Genome-wide expression dynamics of a marine virus and host reveal features of co-evolutionQ34680343
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Integration of a complex regulatory cascade involving the SirA/BarA and Csr global regulatory systems that controls expression of the Salmonella SPI-1 and SPI-2 virulence regulons through HilDQ35049823
Identification of a novel regulatory protein (CsrD) that targets the global regulatory RNAs CsrB and CsrC for degradation by RNase E.Q35052576
Recognition of the small regulatory RNA RydC by the bacterial Hfq proteinQ35111238
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CsrA inhibits translation initiation of Escherichia coli hfq by binding to a single site overlapping the Shine-Dalgarno sequenceQ35949212
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A role for Rho-dependent polarity in gene regulation by a noncoding small RNAQ36186387
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The RpoS-mediated general stress response in Escherichia coliQ34189650
Mechanism of positive regulation by DsrA and RprA small noncoding RNAs: pairing increases translation and protects rpoS mRNA from degradationQ34192636
Complex transcriptional regulation of citrate metabolism in Clostridium perfringensQ34219290
Identification and function of the RNA chaperone Hfq in the Lyme disease spirochete Borrelia burgdorferi.Q34238399
Recognition of U-rich RNA by Hfq from the Gram-positive pathogen Listeria monocytogenes.Q34240871
The small RNA RyhB contributes to siderophore production and virulence of uropathogenic Escherichia coliQ28248484
A conserved small RNA promotes discoordinate expression of the glmUS operon mRNA to activate GlmS synthesisQ28248562
Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiationQ28252581
Base-pairing requirement for RNA silencing by a bacterial small RNA and acceleration of duplex formation by HfqQ28253347
Switching off small RNA regulation with trap-mRNAQ28255082
Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNAQ28257497
Targeting of csgD by the small regulatory RNA RprA links stationary phase, biofilm formation and cell envelope stress in Escherichia coliQ28260482
Noncanonical repression of translation initiation through small RNA recruitment of the RNA chaperone HfqQ28263595
Translational activation by the noncoding RNA DsrA involves alternative RNase III processing in the rpoS 5'-leaderQ28264495
The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio choleraeQ28270975
Effect of RyhB small RNA on global iron use in Escherichia coliQ28275120
The small noncoding DsrA RNA is an acid resistance regulator in Escherichia coliQ28280186
Targeted decay of a regulatory small RNA by an adaptor protein for RNase E and counteraction by an anti-adaptor RNAQ28286931
Remodelling of the Escherichia coli outer membrane by two small regulatory RNAsQ28287313
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The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNAQ28288672
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Small RNA binding to 5' mRNA coding region inhibits translational initiationQ28305161
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Dual posttranscriptional regulation via a cofactor-responsive mRNA leaderQ37008947
The Crp-activated small noncoding regulatory RNA CyaR (RyeE) links nutritional status to group behaviorQ37051352
Functional determinants of the quorum-sensing non-coding RNAs and their roles in target regulationQ37061489
Complex transcriptional and post-transcriptional regulation of an enzyme for lipopolysaccharide modificationQ37151759
Synthetic tolerance: three noncoding small RNAs, DsrA, ArcZ and RprA, acting supra-additively against acid stressQ37224748
Quorum sensing in staphylococciQ37247099
Deciphering the interplay between two independent functions of the small RNA regulator SgrS in SalmonellaQ37252988
Post-transcriptional activation of a diguanylate cyclase by quorum sensing small RNAs promotes biofilm formation in Vibrio cholerae.Q37254225
The RNA binding protein CsrA controls cyclic di-GMP metabolism by directly regulating the expression of GGDEF proteinsQ37326145
Small RNA-dependent expression of secondary metabolism is controlled by Krebs cycle function in Pseudomonas fluorescensQ37454321
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Current knowledge on regulatory RNAs and their machineries in Staphylococcus aureus.Q38006609
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Post-transcriptional regulation on a global scale: form and function of Csr/Rsm systems.Q38016604
Cycling of RNAs on Hfq.Q38087172
Nutrient and chemical sensing by intestinal pathogensQ38121349
The ribonucleoprotein Csr networkQ38161763
Small RNA regulators in bacteria: powerful tools for metabolic engineering and synthetic biologyQ38187359
Small RNAs in the control of RpoS, CsgD, and biofilm architecture of Escherichia coliQ38230079
Small RNA functions in carbon metabolism and virulence of enteric pathogensQ38235406
The Streptococcus mutans irvA gene encodes a trans-acting riboregulatory mRNA.Q38301782
Competition among Hfq-binding small RNAs in Escherichia coliQ38469100
trans-complementation of a Staphylococcus aureus agr mutant by Staphylococcus lugdunensis agr RNAIII.Q39568457
A two-component phosphotransfer network involving ArcB, ArcA, and RssB coordinates synthesis and proteolysis of sigmaS (RpoS) in E. coliQ39705576
Coincident Hfq binding and RNase E cleavage sites on mRNA and small regulatory RNAsQ39784092
Superfolder GFP reporters validate diverse new mRNA targets of the classic porin regulator, MicF RNA.Q40028342
Hfq (HF1) stimulates ompA mRNA decay by interfering with ribosome bindingQ40443123
Co-ordinated regulation of amino sugar biosynthesis and degradation: the NagC repressor acts as both an activator and a repressor for the transcription of the glmUS operon and requires two separated NagC binding sitesQ40789107
Common and divergent features in transcriptional control of the homologous small RNAs GlmY and GlmZ in EnterobacteriaceaeQ41431667
Structural requirement in Clostridium perfringens collagenase mRNA 5' leader sequence for translational induction through small RNA-mRNA base pairingQ41445766
Cross talk between ABC transporter mRNAs via a target mRNA-derived sponge of the GcvB small RNAQ41516624
Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivityQ41863185
The Cpx envelope stress response regulates and is regulated by small noncoding RNAs.Q41934938
Comparative transcriptomics of two environmentally relevant cyanobacteria reveals unexpected transcriptome diversityQ41955064
Antisense RNA protects mRNA from RNase E degradation by RNA-RNA duplex formation during phage infectionQ42045607
Characterization of genes regulated directly by the VirR/VirS system in Clostridium perfringensQ42137259
Major role for mRNA binding and restructuring in sRNA recruitment by Hfq.Q42174762
Small regulatory RNAs control the multi-cellular adhesive lifestyle of Escherichia coli.Q42500644
Tn5 transposition in Escherichia coli is repressed by Hfq and activated by over-expression of the small non-coding RNA SgrS.Q42600827
Antagonistic functions between the RNA chaperone Hfq and an sRNA regulate sensitivity to the antibiotic colicinQ42696570
Requirement of the CsdA DEAD-box helicase for low temperature riboregulation of rpoS mRNAQ42713382
An infection-relevant transcriptomic compendium for Salmonella enterica Serovar TyphimuriumQ42774408
A small RNA activates CFA synthase by isoform-specific mRNA stabilizationQ42883177
CsrA activates flhDC expression by protecting flhDC mRNA from RNase E-mediated cleavage.Q43208080
Dual control by perfectly overlapping sigma 54- and sigma 70- promoters adjusts small RNA GlmY expression to different environmental signalsQ43258218
Pervasive post-transcriptional control of genes involved in amino acid metabolism by the Hfq-dependent GcvB small RNA.Q43576806
Roles of the plasminogen activator streptokinase and the plasminogen-associated M protein in an experimental model for streptococcal impetigoQ44248200
Accumulation of glucose 6-phosphate or fructose 6-phosphate is responsible for destabilization of glucose transporter mRNA in Escherichia coliQ44310039
Organization and transcriptional regulation of myo-inositol operon in Clostridium perfringensQ44926736
The formation of cyclopropane fatty acids in Salmonella enterica serovar TyphimuriumQ45211900
Identification of csrR/csrS, a genetic locus that regulates hyaluronic acid capsule synthesis in group A StreptococcusQ48014401
A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutatorQ48047346
Hfq and Hfq-dependent small RNAs are major contributors to multicellular development in Salmonella enterica serovar TyphimuriumQ50030594
CsrA post-transcriptionally represses pgaABCD, responsible for synthesis of a biofilm polysaccharide adhesin of Escherichia coli.Q52564428
Tn10/IS10 transposition is downregulated at the level of transposase expression by the RNA‐binding protein HfqQ52603392
Riboregulation of the bacterial actin-homolog MreB by DsrA small noncoding RNA.Q54278546
P433issue3
P407language of work or nameEnglishQ1860
P304page(s)362-78
P577publication date2015-05-01
P1433published inFEMS Microbiology ReviewsQ15762226
P1476titleTarget activation by regulatory RNAs in bacteria
P478volume39

Reverse relations

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