scholarly article | Q13442814 |
P2093 | author name string | A Zhang | |
D D Sledjeski | |||
C Whitman | |||
P2860 | cites work | Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications | Q24561689 |
The small RNA, DsrA, is essential for the low temperature expression of RpoS during exponential growth in Escherichia coli | Q24562141 | ||
A small RNA acts as an antisilencer of the H-NS-silenced rcsA gene of Escherichia coli | Q24563821 | ||
Efficient translation of the RpoS sigma factor in Salmonella typhimurium requires host factor I, an RNA-binding protein encoded by the hfq gene | Q24643457 | ||
DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcription | Q24645477 | ||
Riboregulation in Escherichia coli: DsrA RNA acts by RNA:RNA interactions at multiple loci | Q24645507 | ||
A trans-acting RNA as a control switch in Escherichia coli: DsrA modulates function by forming alternative structures | Q24652762 | ||
Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter | Q27860697 | ||
Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa | Q27861105 | ||
High efficiency transformation of E. coli by high voltage electroporation | Q29615278 | ||
One-step preparation of competent Escherichia coli: transformation and storage of bacterial cells in the same solution | Q33846270 | ||
The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) protein | Q33889724 | ||
Characterization of broadly pleiotropic phenotypes caused by an hfq insertion mutation in Escherichia coli K-12. | Q34327163 | ||
The RNA-binding protein HF-I, known as a host factor for phage Qbeta RNA replication, is essential for rpoS translation in Escherichia coli | Q34383062 | ||
Identification of the promoter region for the colanic acid polysaccharide biosynthetic genes in Escherichia coli K-12. | Q35609880 | ||
Transcription of the mutL repair, miaA tRNA modification, hfq pleiotropic regulator, and hflA region protease genes of Escherichia coli K-12 from clustered Esigma32-specific promoters during heat shock | Q35614147 | ||
Negative regulation of mutS and mutH repair gene expression by the Hfq and RpoS global regulators of Escherichia coli K-12. | Q35633546 | ||
Plasmids bearing hfq and the hns-like gene stpA complement hns mutants in modulating arginine decarboxylase gene expression in Escherichia coli | Q35980094 | ||
RcsA, an unstable positive regulator of capsular polysaccharide synthesis | Q36131598 | ||
Fine-structure mapping and identification of two regulators of capsule synthesis in Escherichia coli K-12. | Q36204735 | ||
Gene expression from plasmids containing the araBAD promoter at subsaturating inducer concentrations represents mixed populations. | Q36303609 | ||
Altered 3'-terminal RNA structure in phage Qbeta adapted to host factor-less Escherichia coli | Q36584728 | ||
Host factor I, Hfq, binds to Escherichia coli ompA mRNA in a growth rate-dependent fashion and regulates its stability. | Q36729932 | ||
Host factor Hfq of Escherichia coli stimulates elongation of poly(A) tails by poly(A) polymerase I. | Q37105983 | ||
Regulation of capsular polysaccharide synthesis in Escherichia coli K12. | Q37479221 | ||
Site-specific interaction of Qbeta host factor and ribosomal protein S1 with Qbeta and R17 bacteriophage RNAs | Q38359700 | ||
Mutations that increase expression of the rpoS gene and decrease its dependence on hfq function in Salmonella typhimurium | Q39844182 | ||
The putative sigma factor KatF is regulated posttranscriptionally during carbon starvation | Q39927181 | ||
Hfq (HF1) stimulates ompA mRNA decay by interfering with ribosome binding | Q40443123 | ||
Escherichia coli protein StpA stimulates self-splicing by promoting RNA assembly in vitro. | Q43205795 | ||
Bacterial proteins required for replication of phage Q ribonucleic acid. Pruification and properties of host factor I, a ribonucleic acid-binding protein | Q44199523 | ||
Resolution of Two Factors required in the Qβ-RNA Polymerase Reaction | Q59011385 | ||
Factor Fraction required for the Synthesis of Bacteriophage Qβ-RNA | Q59097796 | ||
The host factor required for RNA phage Qbeta RNA replication in vitro. Intracellular location, quantitation, and purification by polyadenylate-cellulose chromatography | Q67508261 | ||
Transcript analyses of the uvsX-40-41 region of bacteriophage T4. Changes in the RNA as infection proceeds | Q69522624 | ||
Dissecting RNA-protein interactions: RNA-RNA recognition by Rop | Q71666769 | ||
P433 | issue | 6 | |
P407 | language of work or name | English | Q1860 |
P304 | page(s) | 1997-2005 | |
P577 | publication date | 2001-03-01 | |
P1433 | published in | Journal of Bacteriology | Q478419 |
P1476 | title | Hfq is necessary for regulation by the untranslated RNA DsrA | |
P478 | volume | 183 |
Q24683800 | A dual function for a bacterial small RNA: SgrS performs base pairing-dependent regulation and encodes a functional polypeptide |
Q48041891 | A novel riboregulator switch system of gene expression for enhanced microbial production of succinic acid. |
Q24536169 | A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli |
Q39679366 | An N-terminally truncated RpoS (sigma(S)) protein in Escherichia coli is active in vivo and exhibits normal environmental regulation even in the absence of rpoS transcriptional and translational control signals |
Q42696570 | Antagonistic functions between the RNA chaperone Hfq and an sRNA regulate sensitivity to the antibiotic colicin |
Q34865022 | Artificial trans-encoded small non-coding RNAs specifically silence the selected gene expression in bacteria. |
Q34409384 | Bacterial small RNA regulators |
Q24804862 | Both RNase E and RNase III control the stability of sodB mRNA upon translational inhibition by the small regulatory RNA RyhB. |
Q35121003 | BrucellaStationary-Phase Gene Expression and Virulence |
Q64885783 | Caulobacter crescentus Hfq structure reveals a conserved mechanism of RNA annealing regulation. |
Q21562607 | Cellular electron microscopy imaging reveals the localization of the Hfq protein close to the bacterial membrane |
Q41123093 | Characterization of MicA interactions suggests a potential novel means of gene regulation by small non-coding RNAs. |
Q28254721 | Characterization of the small untranslated RNA RyhB and its regulon in Vibrio cholerae |
Q34240883 | Clostridium difficile Hfq can replace Escherichia coli Hfq for most of its function |
Q28252581 | Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation |
Q39784092 | Coincident Hfq binding and RNase E cleavage sites on mRNA and small regulatory RNAs |
Q38469100 | Competition among Hfq-binding small RNAs in Escherichia coli |
Q44932493 | Computational approaches for the discovery of bacterial small RNAs |
Q39997770 | Constitutive Activation of the Escherichia coli Pho Regulon Upregulates rpoS Translation in an Hfq-Dependent Fashion |
Q40130460 | Controlled Expression of an rpoS Antisense RNA Can Inhibit RpoS Function in Escherichia coli |
Q24684800 | Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli |
Q30252727 | Crystal structure and RNA-binding properties of an Hfq homolog from the deep-branching Aquificae: conservation of the lateral RNA-binding mode |
Q27675381 | Crystal structure of Hfq from Bacillus subtilis in complex with SELEX-derived RNA aptamer: insight into RNA-binding properties of bacterial Hfq |
Q21145046 | Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq |
Q40171959 | Development and application of a dapB-based in vivo expression technology system to study colonization of rice by the endophytic nitrogen-fixing bacterium Pseudomonas stutzeri A15. |
Q34508819 | Disruption of small RNA signaling caused by competition for Hfq. |
Q37200460 | Diverse mechanisms of post-transcriptional repression by the small RNA regulator of glucose-phosphate stress |
Q34316573 | DksA affects ppGpp induction of RpoS at a translational level |
Q40736188 | DsrA regulatory RNA represses both hns and rbsD mRNAs through distinct mechanisms in Escherichia coli. |
Q24607427 | Duplex formation between the sRNA DsrA and rpoS mRNA is not sufficient for efficient RpoS synthesis at low temperature |
Q37393528 | Effect of salt and RNA structure on annealing and strand displacement by Hfq. |
Q28292183 | Escherichia coli Hfq has distinct interaction surfaces for DsrA, rpoS and poly(A) RNAs |
Q42723137 | Exopolysaccharide sugars contribute to biofilm formation by Salmonella enterica serovar typhimurium on HEp-2 cells and chicken intestinal epithelium. |
Q35634595 | Genetic evidence suggests that the intergenic region between pstA and pstB plays a role in the regulation of rpoS translation during phosphate limitation |
Q34191891 | Genome-wide detection of novel regulatory RNAs in E. coli |
Q24633132 | Genomic SELEX for Hfq-binding RNAs identifies genomic aptamers predominantly in antisense transcripts |
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Q29615791 | Hfq and its constellation of RNA |
Q37015883 | Hfq assists small RNAs in binding to the coding sequence of ompD mRNA and in rearranging its structure |
Q28293533 | Hfq binding changes the structure of Escherichia coli small noncoding RNAs OxyS and RprA, which are involved in the riboregulation of rpoS |
Q27685299 | Hfq binds ribonucleotides in three different RNA-binding sites |
Q57260318 | Hfq chaperone brings speed dating to bacterial sRNA |
Q40724195 | Hfq is a regulator of F-plasmid TraJ and TraM synthesis in Escherichia coli. |
Q24680586 | Hfq modulates the sigmaE-mediated envelope stress response and the sigma32-mediated cytoplasmic stress response in Escherichia coli |
Q25257777 | Hfq variant with altered RNA binding functions |
Q34107548 | Hfq, a new chaperoning role: binding to messenger RNA determines access for small RNA regulator |
Q28492730 | Hfq-dependent alterations of the transcriptome profile and effects on quorum sensing in Pseudomonas aeruginosa |
Q29619904 | Hfq: a bacterial Sm-like protein that mediates RNA-RNA interaction |
Q34927627 | Honing the message: post-transcriptional and post-translational control in attaching and effacing pathogens |
Q27477670 | Host Factors in Positive-Strand RNA Virus Genome Replication |
Q34473835 | How to find small non-coding RNAs in bacteria |
Q34238399 | Identification and function of the RNA chaperone Hfq in the Lyme disease spirochete Borrelia burgdorferi. |
Q24601229 | Identification of novel small RNAs using comparative genomics and microarrays |
Q24540168 | Identification of the Hfq-binding site on DsrA RNA: Hfq binds without altering DsrA secondary structure |
Q35188712 | Impact of Hfq on the Bacillus subtilis transcriptome |
Q36747192 | Impact of the RNA chaperone Hfq on the fitness and virulence potential of uropathogenic Escherichia coli. |
Q24557422 | Implication of membrane localization of target mRNA in the action of a small RNA: mechanism of post-transcriptional regulation of glucose transporter in Escherichia coli |
Q36306550 | In vivo characterization of an Hfq protein encoded by the Bacillus anthracis virulence plasmid pXO1 |
Q39505158 | In vivo expression from the RpoS-dependent P1 promoter of the osmotically regulated proU operon in Escherichia coli and Salmonella enterica serovar Typhimurium: activation by rho and hns mutations and by cold stress |
Q28211455 | Interactions of the non-coding RNA DsrA and RpoS mRNA with the 30 S ribosomal subunit |
Q35852136 | Isoenergetic microarrays to study the structure and interactions of DsrA and OxyS RNAs in two- and three-component complexes |
Q40621958 | Killing by ampicillin and ofloxacin induces overlapping changes in Escherichia coli transcription profile. |
Q24679480 | Limited role for the DsrA and RprA regulatory RNAs in rpoS regulation in Salmonella enterica |
Q64928887 | Mechanisms for Hfq-Independent Activation of rpoS by DsrA, a Small RNA, in Escherichia coli. |
Q34811166 | Modification of the RpoS network with a synthetic small RNA. |
Q54390428 | Mutation of GOGAT prevents pea bacteroid formation and N2 fixation by globally downregulating transport of organic nitrogen sources. |
Q35548333 | New insight into the structure and function of Hfq C-terminus |
Q34271960 | Non-coding sRNAs regulate virulence in the bacterial pathogen Vibrio cholerae. |
Q37402014 | Nucleoid-associated proteins and bacterial physiology. |
Q37392501 | Poly(A)-assisted RNA decay and modulators of RNA stability |
Q34006620 | Positive regulation by small RNAs and the role of Hfq |
Q51393409 | Positive regulatory dynamics by a small noncoding RNA: speeding up responses under temperature stress. |
Q24537811 | Predicted structure and phyletic distribution of the RNA-binding protein Hfq. |
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Q28742043 | Quantifying the sequence-function relation in gene silencing by bacterial small RNAs |
Q28469313 | Quantitative characteristics of gene regulation by small RNA |
Q35949964 | Quorum sensing in Escherichia coli is signaled by AI-2/LsrR: effects on small RNA and biofilm architecture. |
Q33742173 | RIP-seq analysis of eukaryotic Sm proteins identifies three major categories of Sm-containing ribonucleoproteins |
Q40666181 | RNA chaperone activity of the Sm-like Hfq protein |
Q38055138 | RNA helicases: diverse roles in prokaryotic response to abiotic stress. |
Q24684056 | RNase E-dependent processing stabilizes MicX, a Vibrio cholerae sRNA |
Q35624262 | Regulation by RNA. |
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Q34194972 | Regulatory roles for small RNAs in bacteria |
Q42713382 | Requirement of the CsdA DEAD-box helicase for low temperature riboregulation of rpoS mRNA |
Q50913509 | Resistance to environmental stress requires the RNA chaperones CspC and CspE. |
Q28220384 | Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase |
Q28200768 | Signal transduction cascade for regulation of RpoS: temperature regulation of DsrA |
Q36393509 | Sm-like protein Hfq: location of the ATP-binding site and the effect of ATP on Hfq-- RNA complexes. |
Q27641658 | Sm-like proteins in Eubacteria: the crystal structure of the Hfq protein from Escherichia coli |
Q36668567 | Small RNA regulators and the bacterial response to stress |
Q35133724 | Small RNA regulators of translation: mechanisms of action and approaches for identifying new small RNAs. |
Q35658284 | Spectroscopic observation of RNA chaperone activities of Hfq in post-transcriptional regulation by a small non-coding RNA. |
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Q27667727 | Structural analysis of full-length Hfq fromEscherichia coli |
Q42324804 | Structural flexibility of RNA as molecular basis for Hfq chaperone function |
Q35040942 | Structural insights into the dynamics and function of the C-terminus of the E. coli RNA chaperone Hfq. |
Q38093756 | Structure and RNA-binding properties of the bacterial LSm protein Hfq. |
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Q36470338 | The RNA binding protein Hfq interacts specifically with tRNAs. |
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Q34026379 | The Vibrio cholerae quorum sensing response is mediated by Hfq-dependent sRNA/mRNA base pairing interactions. |
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Q34053758 | The poly(A) binding protein Hfq protects RNA from RNase E and exoribonucleolytic degradation |
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Q28288672 | The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNA |
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Q34571457 | The small untranslated RNA SR1 from the Bacillus subtilis genome is involved in the regulation of arginine catabolism. |
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Q83929165 | This paper has been retracted.Retraction notice is found at http://nar.oxfordjournals.org/cgi/content/full/37/15/5234 |
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