The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAs

scientific article (publication date: 2002)

The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAs is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/S1097-2765(01)00437-3
P8608Fatcat IDrelease_kza7mj2p7jd7tfxod7eq4chb6i
P3181OpenCitations bibliographic resource ID4914030
P698PubMed publication ID11804582

P50authorGisela StorzQ29470553
P2093author name stringAlasdair C Steven
Joaquin Ortega
Karen M Wassarman
Aixia Zhang
P2860cites workA doughnut-shaped heteromer of human Sm-like proteins binds to the 3'-end of U6 snRNA, thereby facilitating U4/U6 duplex formation in vitroQ22010663
The Escherichia coli OxyS regulatory RNA represses fhlA translation by blocking ribosome bindingQ24533360
RNA binding in an Sm core domain: X-ray structure and functional analysis of an archaeal Sm protein complexQ24534404
Sm protein-Sm site RNA interactions within the inner ring of the spliceosomal snRNP core structureQ24540360
Hfq is necessary for regulation by the untranslated RNA DsrAQ24548921
Identification of novel small RNAs using comparative genomics and microarraysQ24601229
The Sm domain is an ancient RNA-binding motif with oligo(U) specificityQ24618608
Efficient translation of the RpoS sigma factor in Salmonella typhimurium requires host factor I, an RNA-binding protein encoded by the hfq geneQ24643457
DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcriptionQ24645477
The crystal structure of a heptameric archaeal Sm protein: Implications for the eukaryotic snRNP coreQ27631567
Crystal structure of a heptameric Sm-like protein complex from archaea: implications for the structure and evolution of snRNPsQ27632475
Yeast Sm-like proteins function in mRNA decapping and decayQ27936322
Structure and assembly of the spliceosomal small nuclear ribonucleoprotein particlesQ28143806
Functions of Lsm proteins in mRNA degradation and splicingQ28143826
Spliceosomal UsnRNP biogenesis, structure and functionQ28188106
Regulation of RpoS by a novel small RNA: the characterization of RprAQ28204998
Hfq: a bacterial Sm-like protein that mediates RNA-RNA interactionQ29619904
Growth phase-dependent variation in protein composition of the Escherichia coli nucleoidQ33638020
Dis-assembly lines: the proteasome and related ATPase-assisted proteasesQ33885174
The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) proteinQ33889724
A new resolution criterion based on spectral signal-to-noise ratiosQ34186788
Characterization of broadly pleiotropic phenotypes caused by an hfq insertion mutation in Escherichia coli K-12.Q34327163
The RNA-binding protein HF-I, known as a host factor for phage Qbeta RNA replication, is essential for rpoS translation in Escherichia coliQ34383062
Negative regulation of mutS and mutH repair gene expression by the Hfq and RpoS global regulators of Escherichia coli K-12.Q35633546
Regulation of the Escherichia coli hfq gene encoding the host factor for phage Q betaQ36104877
Altered 3'-terminal RNA structure in phage Qbeta adapted to host factor-less Escherichia coliQ36584728
Host factor I, Hfq, binds to Escherichia coli ompA mRNA in a growth rate-dependent fashion and regulates its stability.Q36729932
Host factor Hfq of Escherichia coli stimulates elongation of poly(A) tails by poly(A) polymerase I.Q37105983
Digital image processing of electron micrographs: the PIC system-III.Q39427192
Promoter substitution and deletion analysis of upstream region required for rpoS translational regulation.Q39567505
RNA Replication: Function and Structure of QBeta-ReplicaseQ39805480
The RNA-binding protein HF-I plays a global regulatory role which is largely, but not exclusively, due to its role in expression of the sigmaS subunit of RNA polymerase in Escherichia coliQ39843978
Mutations that increase expression of the rpoS gene and decrease its dependence on hfq function in Salmonella typhimuriumQ39844182
A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutatorQ48047346
A biochemical function for the Sm complex.Q51069132
Improved methods for determination of rotational symmetries in macromolecules.Q52332403
Odd men out: a quantitative objective procedure for identifying anomalous members of a set of noisy images of ostensibly identical specimens.Q52654979
Reconstitution of Qbeta Replicase Lacking Subunit alpha with Protein-Synthesis-Interference Factor iQ53792586
The cellular concentration of the sigma S subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stabilityQ54631609
Factor Fraction required for the Synthesis of Bacteriophage Qβ-RNAQ59097796
The effects of radiation damage on the structure of frozen hydrated HSV-1 capsidsQ71994308
Recognition of bacteriophage Qbeta plus strand RNA as a template by Qbeta replicase: role of RNA interactions mediated by ribosomal proteins S1 and host factorQ73338013
Sm-like proteins wRING the neck of mRNAQ74014182
fhlA repression by OxyS RNA: kissing complex formation at two sites results in a stable antisense-target RNA complexQ74027600
Two types of localization of the DNA-binding proteins within the Escherichia coli nucleoidQ74187557
P433issue1
P407language of work or nameEnglishQ1860
P304page(s)11-22
P577publication date2002-01-01
P1433published inMolecular CellQ3319468
P1476titleThe Sm-like Hfq protein increases OxyS RNA interaction with target mRNAs
P478volume9

Reverse relations

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Q36470338The RNA binding protein Hfq interacts specifically with tRNAs.
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Q35943252The RNA chaperone Hfq regulates antibiotic biosynthesis in the rhizobacterium Pseudomonas aeruginosa M18.
Q34149244The RNA-binding protein Hfq of Listeria monocytogenes: role in stress tolerance and virulence
Q28292941The Vibrio parahaemolyticus small RNA RyhB promotes production of the siderophore vibrioferrin by stabilizing the polycistronic mRNA
Q24670938The Yersinia pestis gcvB gene encodes two small regulatory RNA molecules
Q90196530The bacterial endoribonuclease RNase E can cleave RNA in the absence of the RNA chaperone Hfq
Q37995707The bacterial protein Hfq: much more than a mere RNA-binding factor
Q21145045The challenge of regulation in a minimal photoautotroph: non-coding RNAs in Prochlorococcus
Q38301581The decapping activator Lsm1p-7p-Pat1p complex has the intrinsic ability to distinguish between oligoadenylated and polyadenylated RNAs
Q37663341The etiological agent of Lyme disease, Borrelia burgdorferi, appears to contain only a few small RNA molecules
Q36768233The expanding universe of noncoding RNAs
Q43149694The functional Hfq-binding module of bacterial sRNAs consists of a double or single hairpin preceded by a U-rich sequence and followed by a 3' poly(U) tail
Q34045712The importance of the small RNA chaperone Hfq for growth of epidemic Yersinia pestis, but not Yersinia pseudotuberculosis, with implications for plague biology
Q26851952The noncoding RNA revolution-trashing old rules to forge new ones
Q24644821The oligomerization and ligand-binding properties of Sm-like archaeal proteins (SmAPs)
Q34053758The poly(A) binding protein Hfq protects RNA from RNase E and exoribonucleolytic degradation
Q40763627The protease Lon and the RNA-binding protein Hfq reduce silencing of the Escherichia coli bgl operon by H-NS.
Q36566588The ribonuclease polynucleotide phosphorylase can interact with small regulatory RNAs in both protective and degradative modes.
Q41606921The role of Hfq in regulation of lipA expression in Pseudomonas protegens Pf-5.
Q38357202The role of RNA chaperone Hfq in poly(A) metabolism methods to determine positions, abundance, and lengths of short oligo(A) tails.
Q28288672The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNA
Q28058215The small RNA PhrS stimulates synthesis of the Pseudomonas aeruginosa quinolone signal
Q21131294The small RNA SgrS: roles in metabolism and pathogenesis of enteric bacteria
Q33826038The small RNA chaperone Hfq is required for the virulence of Yersinia pseudotuberculosis
Q57183085The small RNA, SdsR, acts as a novel type of toxin in Escherichia coli
Q34571457The small untranslated RNA SR1 from the Bacillus subtilis genome is involved in the regulation of arginine catabolism.
Q33785527The stoichiometry of the Escherichia coli Hfq protein bound to RNA.
Q27663220The structures of mutant forms of Hfq fromPseudomonas aeruginosareveal the importance of the conserved His57 for the protein hexamer organization
Q83929165This paper has been retracted.Retraction notice is found at http://nar.oxfordjournals.org/cgi/content/full/37/15/5234
Q52603392Tn10/IS10 transposition is downregulated at the level of transposase expression by the RNA‐binding protein Hfq
Q92375921Transcription of the Subtilase Cytotoxin Gene subAB 1 in Shiga Toxin-Producing Escherichia coli Is Dependent on hfq and hns
Q33401092Transcriptomic and metabolomic profiling of Zymomonas mobilis during aerobic and anaerobic fermentations
Q36600386Translation initiation and the fate of bacterial mRNAs
Q28266867Translational activation of rpoS mRNA by the non-coding RNA DsrA and Hfq does not require ribosome binding
Q36593808Translational attenuation and mRNA stabilization as mechanisms of erm(B) induction by erythromycin
Q42140013Translational autocontrol of the Escherichia coli hfq RNA chaperone gene
Q52401284Translational regulation by bacterial small RNAs via an unusual Hfq-dependent mechanism.
Q24634637Translational regulation of gene expression by an anaerobically induced small non-coding RNA in Escherichia coli
Q28290812Turn-over of the small non-coding RNA RprA in E. coli is influenced by osmolarity
Q21145881Two seemingly homologous noncoding RNAs act hierarchically to activate glmS mRNA translation
Q24323271Unique Sm core structure of U7 snRNPs: assembly by a specialized SMN complex and the role of a new component, Lsm11, in histone RNA processing
Q35019682Yeast Lsm1p-7p/Pat1p deadenylation-dependent mRNA-decapping factors are required for brome mosaic virus genomic RNA translation
Q37012661snRNAs contain specific SMN-binding domains that are essential for snRNP assembly

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