Characterization of MicA interactions suggests a potential novel means of gene regulation by small non-coding RNAs.

scientific article published on 29 January 2013

Characterization of MicA interactions suggests a potential novel means of gene regulation by small non-coding RNAs. is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/NAR/GKT008
P932PMC publication ID3597676
P698PubMed publication ID23361466
P5875ResearchGate publication ID235382800

P50authorDarren M GowersQ61865872
P2093author name stringAnastasia J Callaghan
Carlanne M Stone
Helen A Vincent
Charlotte A Henderson
Peter D Cary
Jack O Phillips
P2860cites workMfold web server for nucleic acid folding and hybridization predictionQ24498105
Hfq-dependent regulation of OmpA synthesis is mediated by an antisense RNA.Q24536474
Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: a bacterial Sm-like proteinQ24536928
Hfq is necessary for regulation by the untranslated RNA DsrAQ24548921
A trans-acting RNA as a control switch in Escherichia coli: DsrA modulates function by forming alternative structuresQ24652762
Thermodynamically balanced inside-out (TBIO) PCR-based gene synthesis: a novel method of primer design for high-fidelity assembly of longer gene sequencesQ24658319
Conserved and variable functions of the sigmaE stress response in related genomesQ24811266
Crystal structures of coaxially stacked kissing complexes of the HIV-1 RNA dimerization initiation siteQ27636128
Sm-like proteins in Eubacteria: the crystal structure of the Hfq protein from Escherichia coliQ27641658
Structure of Escherichia coli Hfq bound to polyriboadenylate RNAQ27658064
Structural basis for RNA 3'-end recognition by HfqQ27670724
The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAsQ28216159
Auto-assembly as a new regulatory mechanism of noncoding RNAQ28235332
Auto-assembly of E. coli DsrA small noncoding RNA: Molecular characteristics and functional consequencesQ28248938
A nanostructure made of a bacterial noncoding RNAQ28261195
The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNAQ28288672
Cycling of the Sm-like protein Hfq on the DsrA small regulatory RNAQ28294752
Effect of Hfq on RprA-rpoS mRNA pairing: Hfq-RNA binding and the influence of the 5' rpoS mRNA leader regionQ28295584
Small RNA binding to the lateral surface of Hfq hexamers and structural rearrangements upon mRNA target recognitionQ28727846
Hfq, a new chaperoning role: binding to messenger RNA determines access for small RNA regulatorQ34107548
Regulation of ompA mRNA stability: the role of a small regulatory RNA in growth phase-dependent control.Q53647064
Factor Fraction required for the Synthesis of Bacteriophage Qβ-RNAQ59097796
Maintenance of intracellular calcium in Escherichia coliQ67524039
Circular dichroism studies suggest that TAR RNA changes conformation upon specific binding of arginine or guanidineQ67544755
Circular dichroism studies of the HIV-1 Rev protein and its specific RNA binding siteQ68373374
The Intracellular Concentration of Bound and Unbound Magnesium Ions in Escherichia coliQ71213872
Synergism of mutations in bacteriophage Qbeta RNA affecting host factor dependence of Qbeta replicaseQ73329876
Cell lysis directed by sigmaE in early stationary phase and effect of induction of the rpoE gene on global gene expression in Escherichia coliQ81002799
The Escherichia coli sigma(E)-dependent extracytoplasmic stress response is controlled by the regulated proteolysis of an anti-sigma factorQ35206083
HIV-2 RNA dimerization is regulated by intramolecular interactions in vitroQ35902030
Characterization of Vibrio cholerae Hfq provides novel insights into the role of the Hfq C-terminal regionQ36335906
Cloning, purification, and crystallization of a bacterial gene expression regulator--Hfq protein from Escherichia coli.Q38359419
DAMMIF, a program for rapid ab-initio shape determination in small-angle scatteringQ39388340
Coincident Hfq binding and RNase E cleavage sites on mRNA and small regulatory RNAsQ39784092
DegS and YaeL participate sequentially in the cleavage of RseA to activate the sigma(E)-dependent extracytoplasmic stress responseQ39860232
RNAs actively cycle on the Sm-like protein Hfq.Q41429696
The crucial role of PNPase in the degradation of small RNAs that are not associated with Hfq.Q42103322
Major role for mRNA binding and restructuring in sRNA recruitment by Hfq.Q42174762
The seed region of a small RNA drives the controlled destruction of the target mRNA by the endoribonuclease RNase E.Q42428502
Hexamer to monomer equilibrium of E. coli Hfq in solution and its impact on RNA annealingQ42582045
The sigmaE-mediated response to extracytoplasmic stress in Escherichia coli is transduced by RseA and RseB, two negative regulators of sigmaE.Q42656673
Regulation of the small regulatory RNA MicA by ribonuclease III: a target-dependent pathwayQ42714248
The coat protein of prunus necrotic ringspot virus specifically binds to and regulates the conformation of its genomic RNA.Q44570369
Down-regulation of outer membrane proteins by noncoding RNAs: unraveling the cAMP-CRP- and sigmaE-dependent CyaR-ompX regulatory case.Q45958746
Dimerization as a regulatory mechanism in signal transductionQ46409691
P275copyright licenseCreative Commons Attribution-NonCommercial 3.0 UnportedQ18810331
P6216copyright statuscopyrightedQ50423863
P433issue5
P1104number of pages12
P304page(s)3386-3397
P577publication date2013-01-29
P1433published inNucleic Acids ResearchQ135122
P1476titleCharacterization of MicA interactions suggests a potential novel means of gene regulation by small non-coding RNAs
P478volume41

Reverse relations

cites work (P2860)
Q41963002An improved method for surface immobilisation of RNA: application to small non-coding RNA-mRNA pairing.
Q27024583Experimental approaches to identify small RNAs and their diverse roles in bacteria--what we have learnt in one decade of MicA research
Q28293533Hfq binding changes the structure of Escherichia coli small noncoding RNAs OxyS and RprA, which are involved in the riboregulation of rpoS
Q52595198Identification of Plasmid-Encoded sRNAs in a blaNDM-1-Harboring Multidrug-Resistance Plasmid pNDM-HK in Enterobacteriaceae.
Q42291805Nucleoid and cytoplasmic localization of small RNAs in Escherichia coli.
Q48526081Streptococcus sanguinis Non-coding csRNAs Negatively Regulate Expression of Type IV Pilus Retraction ATPase PilT and Biofilm Formation.
Q57183085The small RNA, SdsR, acts as a novel type of toxin in Escherichia coli

Search more.