The RNA binding protein Hfq interacts specifically with tRNAs.

scientific article

The RNA binding protein Hfq interacts specifically with tRNAs. is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1261/RNA.531408
P932PMC publication ID2248270
P698PubMed publication ID18230766
P5875ResearchGate publication ID5620756

P50authorAndrew L. FeigQ42710846
P2093author name stringTaewoo Lee
P2860cites workA new yeast poly(A) polymerase complex involved in RNA quality controlQ21146099
A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coliQ24536169
Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: a bacterial Sm-like proteinQ24536928
Predicted structure and phyletic distribution of the RNA-binding protein Hfq.Q24537811
Identification of the Hfq-binding site on DsrA RNA: Hfq binds without altering DsrA secondary structureQ24540168
Hfq is necessary for regulation by the untranslated RNA DsrAQ24548921
DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcriptionQ24645477
A trans-acting RNA as a control switch in Escherichia coli: DsrA modulates function by forming alternative structuresQ24652762
Solution conformations of unmodified and A(37)N(6)-dimethylallyl modified anticodon stem-loops of Escherichia coli tRNA(Phe)Q27639215
Sm-like proteins in Eubacteria: the crystal structure of the Hfq protein from Escherichia coliQ27641658
Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and a GTP analogQ27729310
UCSF Chimera--a visualization system for exploratory research and analysisQ27860666
RNA degradation by the exosome is promoted by a nuclear polyadenylation complexQ27932438
Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiaeQ27934543
Resolution of Two Factors required in the Qβ-RNA Polymerase ReactionQ59011385
Factor Fraction required for the Synthesis of Bacteriophage Qβ-RNAQ59097796
The structure and aminoacylation of a temperature-sensitive tRNATrp (Escherichia coli)Q71492636
Analysis of the function of Escherichia coli poly(A) polymerase I in RNA metabolismQ73265545
Structural Modelling of the Sm-like Protein Hfq from Escherichia coliQ74403360
Global analysis of small RNA and mRNA targets of HfqQ28184898
The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAsQ28216159
Quantitation of proteinQ28279026
Escherichia coli Hfq has distinct interaction surfaces for DsrA, rpoS and poly(A) RNAsQ28292183
Cycling of the Sm-like protein Hfq on the DsrA small regulatory RNAQ28294752
Escherichia coli Hfq binds A18 and DsrA domain II with similar 2:1 Hfq6/RNA stoichiometry using different surface sitesQ28306489
Interaction network containing conserved and essential protein complexes in Escherichia coliQ29615776
Synthesis of small RNAs using T7 RNA polymeraseQ29615997
The small RNA regulators of Escherichia coli: roles and mechanisms*Q29618536
Hfq: a bacterial Sm-like protein that mediates RNA-RNA interactionQ29619904
RNase E-based ribonucleoprotein complexes: mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAsQ29619938
The bacterial Sm-like protein Hfq: a key player in RNA transactionsQ29620062
Labeling effects on the isoelectric point of green fluorescent proteinQ30772542
mRNA degradation. A tale of poly(A) and multiprotein machines.Q33543980
Stuttering: high-level mistranslation in animal and bacterial cellsQ33965227
RNA quality control: degradation of defective transfer RNAQ34086017
Hfq, a new chaperoning role: binding to messenger RNA determines access for small RNA regulatorQ34107548
Regulatory roles for small RNAs in bacteriaQ34194972
Relative affinities of all Escherichia coli aminoacyl-tRNAs for elongation factor Tu-GTPQ34257597
Characterization of broadly pleiotropic phenotypes caused by an hfq insertion mutation in Escherichia coli K-12.Q34327163
RNase E plays an essential role in the maturation of Escherichia coli tRNA precursorsQ34364179
Polyadenylylation destabilizes the rpsO mRNA of Escherichia coliQ34398938
Regulation of substrate recognition by the MiaA tRNA prenyltransferase modification enzyme of Escherichia coli K-12.Q34425903
Polyadenylylation helps regulate mRNA decay in Escherichia coli.Q34540898
Isoelectric focusing technology quantifies protein signaling in 25 cells.Q35102405
Controlling mRNA stability and translation with small, noncoding RNAsQ35737955
Eukaryotic Lsm proteins: lessons from bacteriaQ36331209
Development of an in vitro mRNA decay system for Escherichia coli: poly(A) polymerase I is necessary to trigger degradationQ36685698
The purification and sequence of a temperature-sensitive tryptophan tRNAQ39665714
Lsm proteins are required for normal processing of pre-tRNAs and their efficient association with La-homologous protein Lhp1pQ39695481
Charging levels of four tRNA species in Escherichia coli Rel(+) and Rel(-) strains during amino acid starvation: a simple model for the effect of ppGpp on translational accuracy.Q43556218
Bacterial proteins required for replication of phage Q ribonucleic acid. Pruification and properties of host factor I, a ribonucleic acid-binding proteinQ44199523
Role of tRNA modification in translational fidelityQ44657710
Probing non-selective cation binding in the hairpin ribozyme with Tb(III).Q47677293
The Sm-like protein Hfq regulates polyadenylation dependent mRNA decay in Escherichia coli.Q54496668
Interaction of Escherichia coli RNA polymerase with the ribosomal protein S1 and the Sm-like ATPase Hfq.Q54522553
P4510describes a project that usesImageQuantQ112270642
P433issue3
P407language of work or nameEnglishQ1860
P304page(s)514-523
P577publication date2008-01-29
P1433published inRNAQ7277164
P1476titleThe RNA binding protein Hfq interacts specifically with tRNAs
P478volume14

Reverse relations

cites work (P2860)
Q36219862Acidic Residues in the Hfq Chaperone Increase the Selectivity of sRNA Binding and Annealing
Q33712153An upstream Hfq binding site in the fhlA mRNA leader region facilitates the OxyS-fhlA interaction
Q33768891Antibiotic sensitivity profiles determined with an Escherichia coli gene knockout collection: generating an antibiotic bar code
Q30418101Archaeal and eukaryotic homologs of Hfq: A structural and evolutionary perspective on Sm function
Q27692531Bacterial small RNA regulators: versatile roles and rapidly evolving variations
Q89985235Characterization of Autoinducer-3 Structure and Biosynthesis in E. coli
Q36335906Characterization of Vibrio cholerae Hfq provides novel insights into the role of the Hfq C-terminal region
Q91655017Conditional Hfq Association with Small Noncoding RNAs in Pseudomonas aeruginosa Revealed through Comparative UV Cross-Linking Immunoprecipitation Followed by High-Throughput Sequencing
Q37122110Conserved arginines on the rim of Hfq catalyze base pair formation and exchange
Q27653537Crystal structure of a novel Sm-like protein of putative cyanophage origin at 2.60 Å resolution
Q64081914Crystal structure of the Lin28-interacting module of human terminal uridylyltransferase that regulates let-7 expression
Q42208617Crystal structures of U6 snRNA-specific terminal uridylyltransferase.
Q21145046Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq
Q59136826Deletion of a conserved transcript PG_RS02100 expressed during logarithmic growth in Porphyromonas gingivalis results in hyperpigmentation and increased tolerance to oxidative stress
Q42554046Distinct kinetic determinants for the stepwise CCA addition to tRNA
Q38298151Emerging roles of tRNA in adaptive translation, signalling dynamics and disease
Q41494241GRIL-seq provides a method for identifying direct targets of bacterial small regulatory RNA by in vivo proximity ligation
Q24633132Genomic SELEX for Hfq-binding RNAs identifies genomic aptamers predominantly in antisense transcripts
Q33532281Hfq affects mRNA levels independently of degradation
Q29615791Hfq and its constellation of RNA
Q36276430Hfq influences multiple transport systems and virulence in the plant pathogen Agrobacterium tumefaciens.
Q36280714Hfq proximity and orientation controls RNA annealing
Q35533217Hfq regulates antibacterial antibiotic biosynthesis and extracellular lytic-enzyme production in Lysobacter enzymogenes OH11.
Q33558040Identification and characterization of noncoding small RNAs in Streptococcus pneumoniae serotype 2 strain D39.
Q34238399Identification and function of the RNA chaperone Hfq in the Lyme disease spirochete Borrelia burgdorferi.
Q34740470Identifying and characterizing Hfq-RNA interactions
Q33968334Impact of Hfq on global gene expression and virulence in Klebsiella pneumoniae
Q24629257Interactions of the RNA-binding protein Hfq with cspA mRNA, encoding the major cold shock protein
Q39773581LSm1-7 complexes bind to specific sites in viral RNA genomes and regulate their translation and replication.
Q42220662Light-Triggered RNA Annealing by an RNA Chaperone
Q42182272Pheromone synthesis in a biomicroreactor coated with anti-adsorption polyelectrolyte multilayer.
Q34538307Photorhabdus-nematode symbiosis is dependent on hfq-mediated regulation of secondary metabolites
Q36044685Polyadenylation helps regulate functional tRNA levels in Escherichia coli
Q90138932Prevalence of small base-pairing RNAs derived from diverse genomic loci
Q24490074Profound impact of Hfq on nutrient acquisition, metabolism and motility in the plant pathogen Agrobacterium tumefaciens
Q34369421Proteome analysis of the UVB-resistant marine bacterium Photobacterium angustum S14
Q36228436Requirement of upstream Hfq-binding (ARN)x elements in glmS and the Hfq C-terminal region for GlmS upregulation by sRNAs GlmZ and GlmY.
Q34122762Revisiting the coding potential of the E. coli genome through Hfq co-immunoprecipitation
Q35095958Single-gene deletion mutants of Escherichia coli with altered sensitivity to bicyclomycin, an inhibitor of transcription termination factor Rho
Q37618005Small RNA interactome of pathogenic E. coli revealed through crosslinking of RNase E.
Q33688009The Archaeal Lsm Protein Binds to Small RNAs
Q47907885The RNA chaperone Hfq enables the environmental stress tolerance super-phenotype of Pseudomonas putida
Q28538741The RNA chaperone Hfq impacts growth, metabolism and production of virulence factors in Yersinia enterocolitica
Q37995707The bacterial protein Hfq: much more than a mere RNA-binding factor
Q28288672The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNA
Q36767589The unmasking of 'junk' RNA reveals novel sRNAs: from processed RNA fragments to marooned riboswitches
Q47652203Toward a more complete view of tRNA biology
Q37692272tRNA nucleotidyltransferases: ancient catalysts with an unusual mechanism of polymerization.

Search more.