scholarly article | Q13442814 |
P50 | author | Terence Hwa | Q30505121 |
P2093 | author name string | Min Huang | |
Junbai Li | |||
Yue Hao | |||
David W Erickson | |||
Hualin Shi | |||
Yingwu Huang | |||
Zhongge J Zhang | |||
P2860 | cites work | Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq | Q21145046 |
A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli | Q24536169 | ||
Predicting oligonucleotide affinity to nucleic acid targets | Q24539440 | ||
Hfq is necessary for regulation by the untranslated RNA DsrA | Q24548921 | ||
MicC, a second small-RNA regulator of Omp protein expression in Escherichia coli | Q24563596 | ||
Regulatory RNAs in bacteria | Q24595082 | ||
DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcription | Q24645477 | ||
A new Vibrio cholerae sRNA modulates colonization and affects release of outer membrane vesicles | Q24647335 | ||
Spot 42 RNA mediates discoordinate expression of the E. coli galactose operon | Q24674172 | ||
Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli | Q24684800 | ||
The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAs | Q28216159 | ||
Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation | Q28252581 | ||
Base-pairing requirement for RNA silencing by a bacterial small RNA and acceleration of duplex formation by Hfq | Q28253347 | ||
Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNA | Q28257497 | ||
The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio cholerae | Q28270975 | ||
Effect of RyhB small RNA on global iron use in Escherichia coli | Q28275120 | ||
A minimal base-pairing region of a bacterial small RNA SgrS required for translational repression of ptsG mRNA | Q28277876 | ||
The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNA | Q28288672 | ||
Involvement of a novel transcriptional activator and small RNA in post-transcriptional regulation of the glucose phosphoenolpyruvate phosphotransferase system | Q28291273 | ||
RNA antitoxins | Q28294158 | ||
Mechanism of RNA silencing by Hfq-binding small RNAs | Q28294833 | ||
Small RNA binding to 5' mRNA coding region inhibits translational initiation | Q28305161 | ||
Quantitative characteristics of gene regulation by small RNA | Q28469313 | ||
The small RNA regulators of Escherichia coli: roles and mechanisms* | Q29618536 | ||
Small non-coding RNAs and the bacterial outer membrane | Q34000397 | ||
Positive regulation by small RNAs and the role of Hfq | Q34006620 | ||
Hfq, a new chaperoning role: binding to messenger RNA determines access for small RNA regulator | Q34107548 | ||
Evolutionary population genetics of promoters: predicting binding sites and functional phylogenies. | Q34115908 | ||
Physical constraints and functional characteristics of transcription factor-DNA interaction. | Q34155055 | ||
Thermodynamic and kinetic characterization of antisense oligodeoxynucleotide binding to a structured mRNA | Q34179717 | ||
Novel sequence-based method for identifying transcription factor binding sites in prokaryotic genomes | Q34310649 | ||
Transcriptional regulation by the numbers: models. | Q36083228 | ||
Fundamental differences in the equilibrium considerations for siRNA and antisense oligodeoxynucleotide design | Q36740097 | ||
Hfq structure, function and ligand binding | Q36774884 | ||
A quantitative comparison of sRNA-based and protein-based gene regulation | Q36973020 | ||
Dynamic features of gene expression control by small regulatory RNAs. | Q37249990 | ||
Biological principles of microRNA-mediated regulation: shared themes amid diversity | Q37293110 | ||
Small RNAs establish gene expression thresholds | Q37303336 | ||
Computational prediction of sRNAs and their targets in bacteria. | Q37671500 | ||
Prediction of antisense oligonucleotide binding affinity to a structured RNA target | Q38321843 | ||
Quantitative specificity of the Mnt repressor | Q38343476 | ||
Coincident Hfq binding and RNase E cleavage sites on mRNA and small regulatory RNAs | Q39784092 | ||
Selection of DNA binding sites by regulatory proteins. II. The binding specificity of cyclic AMP receptor protein to recognition sites | Q41373606 | ||
Regulation of gene expression by small non-coding RNAs: a quantitative view | Q41585774 | ||
Computational approaches for the discovery of bacterial small RNAs | Q44932493 | ||
On the selection and evolution of regulatory DNA motifs | Q46295487 | ||
A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutator | Q48047346 | ||
Regulation of ompA mRNA stability: the role of a small regulatory RNA in growth phase-dependent control. | Q53647064 | ||
Base substitution mutants of the lac operator: in vivo and in vitro affinities for lac repressor. | Q54785600 | ||
P433 | issue | 30 | |
P407 | language of work or name | English | Q1860 |
P921 | main subject | gene silencing | Q1431332 |
P304 | page(s) | 12473-12478 | |
P577 | publication date | 2011-07-08 | |
P1433 | published in | Proceedings of the National Academy of Sciences of the United States of America | Q1146531 |
P1476 | title | Quantifying the sequence-function relation in gene silencing by bacterial small RNAs | |
P478 | volume | 108 |
Q55457570 | A Canonical Biophysical Model of the CsrA Global Regulator Suggests Flexible Regulator-Target Interactions. |
Q24621557 | Comparative genomics boosts target prediction for bacterial small RNAs |
Q38087172 | Cycling of RNAs on Hfq. |
Q47194252 | Design rules of synthetic non-coding RNAs in bacteria |
Q92305729 | Digitalizing heterologous gene expression in Gram-negative bacteria with a portable ON/OFF module |
Q41498041 | Divergence of functional effects among bacterial sRNA paralogs |
Q36775451 | Effects of cooperation between translating ribosome and RNA polymerase on termination efficiency of the Rho-independent terminator. |
Q35192734 | Efficient search, mapping, and optimization of multi-protein genetic systems in diverse bacteria |
Q36043799 | Exploring the Dynamics and Mutational Landscape of Riboregulation with a Minimal Synthetic Circuit in Living Cells |
Q57260318 | Hfq chaperone brings speed dating to bacterial sRNA |
Q36280714 | Hfq proximity and orientation controls RNA annealing |
Q64067281 | Hfq-dependent mRNA unfolding promotes sRNA-based inhibition of translation |
Q42395262 | Iron deprivation in Synechocystis: inference of pathways, non-coding RNAs, and regulatory elements from comprehensive expression profiling |
Q34510047 | Large-scale mapping of sequence-function relations in small regulatory RNAs reveals plasticity and modularity |
Q46914425 | MIROR: a method for cell-type specific microRNA occupancy rate prediction |
Q41241943 | Modelling toehold-mediated RNA strand displacement. |
Q34395461 | Multi-target regulation by small RNAs synchronizes gene expression thresholds and may enhance ultrasensitive behavior |
Q35931768 | Multiple factors dictate target selection by Hfq-binding small RNAs |
Q38935351 | Paradoxical suppression of small RNA activity at high Hfq concentrations due to random-order binding |
Q46911120 | Phenotypic characterization of Salmonella RyhB-1 mutations that modulate target regulation |
Q36386026 | Post-transcriptional regulation of gene expression in Yersinia species |
Q35904949 | Probing the Limits to MicroRNA-Mediated Control of Gene Expression |
Q39436206 | RNA search engines empower the bacterial intranet |
Q27009044 | Regulation by small RNAs in bacteria: expanding frontiers |
Q38172811 | Regulatory RNAs: charming gene management styles for synthetic biology applications |
Q35882335 | The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pair |
Q43149694 | The functional Hfq-binding module of bacterial sRNAs consists of a double or single hairpin preceded by a U-rich sequence and followed by a 3' poly(U) tail |
Q37210945 | Transcript degradation and noise of small RNA-controlled genes in a switch activated network in Escherichia coli |
Q37606918 | Translation rate is controlled by coupled trade-offs between site accessibility, selective RNA unfolding and sliding at upstream standby sites. |
Q37051423 | Twins, quadruplexes, and more: functional aspects of native and engineered RNA self-assembly in vivo |
Search more.