Identification of small Hfq-binding RNAs in Listeria monocytogenes

scientific article

Identification of small Hfq-binding RNAs in Listeria monocytogenes is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1261/RNA.49706
P3181OpenCitations bibliographic resource ID2813199
P932PMC publication ID1484441
P698PubMed publication ID16682563
P5875ResearchGate publication ID7097768

P50authorLotte Sogaard-AndersenQ21264276
Janne K KlitgaardQ37378783
Birgitte H KallipolitisQ37378807
P2093author name stringPoul Valentin-Hansen
Tine Ebersbach
Jesper S Nielsen
P2860cites workSmall RNA genes expressed from Staphylococcus aureus genomic and pathogenicity islands with specific expression among pathogenic strainsQ24530293
Identification of 86 candidates for small non-messenger RNAs from the archaeon Archaeoglobus fulgidus.Q24530580
Transcriptome analysis of Escherichia coli using high-density oligonucleotide probe arraysQ24537785
A computational approach to identify genes for functional RNAs in genomic sequencesQ24555117
Detection of 5'- and 3'-UTR-derived small RNAs and cis-encoded antisense RNAs in Escherichia coliQ24556624
Identification of tandem duplicate regulatory small RNAs in Pseudomonas aeruginosa involved in iron homeostasisQ24561961
Synthesis of staphylococcal virulence factors is controlled by a regulatory RNA moleculeQ24564360
Identification of novel small RNAs using comparative genomics and microarraysQ24601229
RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteriaQ24641843
Global analysis of small RNA and mRNA targets of HfqQ28184898
Novel small RNA-encoding genes in the intergenic regions of Escherichia coliQ28205853
Computational identification of noncoding RNAs in E. coli by comparative genomicsQ28216022
The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAsQ28216159
The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio choleraeQ28270975
A small RNA inhibits translation of the histone-like protein Hc1 in Chlamydia trachomatisQ28289615
Reduced virulence of a hfq mutant of Pseudomonas aeruginosa O1Q28493098
Regulation of bacterial gene expression by riboswitchesQ29617849
The small RNA regulators of Escherichia coli: roles and mechanisms*Q29618536
Hfq: a bacterial Sm-like protein that mediates RNA-RNA interactionQ29619904
The bacterial Sm-like protein Hfq: a key player in RNA transactionsQ29620062
Identification of novel non-coding RNAs as potential antisense regulators in the archaeon Sulfolobus solfataricusQ31142371
Listeria pathogenesis and molecular virulence determinantsQ33975740
Characterization of the groESL operon in Listeria monocytogenes: utilization of two reporter systems (gfp and hly) for evaluating in vivo expression.Q34007913
Hfq, a new chaperoning role: binding to messenger RNA determines access for small RNA regulatorQ34107548
Clostridial VirR/VirS regulon involves a regulatory RNA molecule for expression of toxinsQ34114535
The RNA-binding protein Hfq of Listeria monocytogenes: role in stress tolerance and virulenceQ34149244
Regulatory roles for small RNAs in bacteriaQ34194972
Initiation of protein synthesis in bacteriaQ34401329
Programmed cell death by hok/sok of plasmid R1: processing at the hok mRNA 3'-end triggers structural rearrangements that allow translation and antisense RNA bindingQ34446144
How to find small non-coding RNAs in bacteriaQ34473835
The group A streptococcal virR49 gene controls expression of four structural vir regulon genesQ35377101
Controlling mRNA stability and translation with small, noncoding RNAsQ35737955
Mapping adenines, guanines, and pyrimidines in RNAQ36183946
yst gene expression in Yersinia enterocolitica is positively regulated by a chromosomal region that is highly homologous to Escherichia coli host factor 1 gene (hfq).Q36821854
Coincident Hfq binding and RNase E cleavage sites on mRNA and small regulatory RNAsQ39784092
The Hfq homolog in Legionella pneumophila demonstrates regulation by LetA and RpoS and interacts with the global regulator CsrA.Q40943228
Differential expression of Listeria monocytogenes virulence genes in mammalian host cellsQ40963237
Hfq is essential for Vibrio cholerae virulence and downregulates sigma expressionQ47269170
The Brucella abortus host factor I (HF-I) protein contributes to stress resistance during stationary phase and is a major determinant of virulence in miceQ47910975
Synthesis of group A streptococcal virulence factors is controlled by a regulatory RNA molecule.Q51610762
Regulation of ompA mRNA stability: the role of a small regulatory RNA in growth phase-dependent control.Q53647064
A broad-host-range mobilizable shuttle vector for the construction of transcriptional fusions to beta-galactosidase in gram-positive bacteria.Q54144084
A chemically defined minimal medium for the optimal culture of ListeriaQ73177333
Transcription attenuation: a highly conserved regulatory strategy used by bacteriaQ81684311
P433issue7
P407language of work or nameEnglishQ1860
P921main subjectListeria monocytogenesQ292015
P304page(s)1383-96
P577publication date2006-07-01
P1433published inRNAQ7277164
P1476titleIdentification of small Hfq-binding RNAs in Listeria monocytogenes
P478volume12

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cites work (P2860)
Q37667255A Small Regulatory RNA Contributes to the Preferential Colonization of Escherichia coli O157:H7 in the Large Intestine in Response to a Low DNA Concentration
Q21131553A Staphylococcus aureus small RNA is required for bacterial virulence and regulates the expression of an immune-evasion molecule
Q41190166A Unique cis-Encoded Small Noncoding RNA Is Regulating Legionella pneumophila Hfq Expression in a Life Cycle-Dependent Manner
Q33653390A broadening world of bacterial small RNAs
Q41949572A cis-encoded sRNA, Hfq and mRNA secondary structure act independently to suppress IS200 transposition
Q36232534A detailed view of the intracellular transcriptome of Listeria monocytogenes in murine macrophages using RNA-seq
Q21131415A genome-wide approach to discovery of small RNAs involved in regulation of virulence in Vibrio cholerae
Q28244120A multicopy sRNA of Listeria monocytogenes regulates expression of the virulence adhesin LapB
Q34096685A novel antisense RNA regulates at transcriptional level the virulence gene icsA of Shigella flexneri.
Q33886315A small RNA controls expression of the chitinase ChiA in Listeria monocytogenes
Q34707860A small non-coding RNA of the invasion gene island (SPI-1) represses outer membrane protein synthesis from the Salmonella core genome
Q38029010Acting antisense: plasmid- and chromosome-encoded sRNAs from Gram-positive bacteria
Q37622082An overview of RNAs with regulatory functions in gram-positive bacteria
Q34865022Artificial trans-encoded small non-coding RNAs specifically silence the selected gene expression in bacteria.
Q34606300Association of RNAs with Bacillus subtilis Hfq.
Q35362324Bacterial and cellular RNAs at work during Listeria infection
Q37389545Bacterial chromosome-encoded small regulatory RNAs
Q27692531Bacterial small RNA regulators: versatile roles and rapidly evolving variations
Q34240883Clostridium difficile Hfq can replace Escherichia coli Hfq for most of its function
Q28488946CodY activates transcription of a small RNA in Bacillus subtilis
Q34160197Comparative genome-wide analysis of small RNAs of major Gram-positive pathogens: from identification to application
Q37687817Comparison of widely used Listeria monocytogenes strains EGD, 10403S, and EGD-e highlights genomic variations underlying differences in pathogenicity
Q39950349Complete transcriptional profile of an environmental pathogen
Q42772740Contribution of Hfq to photooxidative stress resistance and global regulation in Rhodobacter sphaeroides
Q27675381Crystal structure of Hfq from Bacillus subtilis in complex with SELEX-derived RNA aptamer: insight into RNA-binding properties of bacterial Hfq
Q37918500Deciphering the regulatory codes in bacterial genomes
Q33521371Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs
Q21145046Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq
Q42014958Defining a role for Hfq in Gram-positive bacteria: evidence for Hfq-dependent antisense regulation in Listeria monocytogenes
Q34294246Detection of very long antisense transcripts by whole transcriptome RNA-Seq analysis of Listeria monocytogenes by semiconductor sequencing technology
Q24622806Experimental discovery of small RNAs in Staphylococcus aureus reveals a riboregulator of central metabolism
Q43181671Exploration of the role of the non-coding RNA SbrE in L. monocytogenes stress response
Q24489878Functional characterization of the RNA chaperone Hfq in the opportunistic human pathogen Stenotrophomonas maltophilia
Q35160857Genome-wide profiling of Hfq-binding RNAs uncovers extensive post-transcriptional rewiring of major stress response and symbiotic regulons in Sinorhizobium meliloti.
Q42601067Hfq affects the expression of the LEE pathogenicity island in enterohaemorrhagic Escherichia coli
Q29615791Hfq and its constellation of RNA
Q33369087High-throughput, kingdom-wide prediction and annotation of bacterial non-coding RNAs
Q38672095How the study of Listeria monocytogenes has led to new concepts in biology
Q33558040Identification and characterization of noncoding small RNAs in Streptococcus pneumoniae serotype 2 strain D39.
Q27693893Identification and role of regulatory non-coding RNAs in Listeria monocytogenes
Q41510653Identification of 88 regulatory small RNAs in the TIGR4 strain of the human pathogen Streptococcus pneumoniae.
Q34359360Identification of a novel small RNA modulating Francisella tularensis pathogenicity
Q24646592Identification of a sigma B-dependent small noncoding RNA in Listeria monocytogenes
Q24684824Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets
Q24622905Identification of regulatory RNAs in Bacillus subtilis
Q34740470Identifying and characterizing Hfq-RNA interactions
Q35621306Illuminating the landscape of host-pathogen interactions with the bacterium Listeria monocytogenes
Q35188712Impact of Hfq on the Bacillus subtilis transcriptome
Q24683587In vitro analysis of the interaction between the small RNA SR1 and its primary target ahrC mRNA
Q36306550In vivo characterization of an Hfq protein encoded by the Bacillus anthracis virulence plasmid pXO1
Q40631587Inhibition of Phagocytic Killing of Escherichia coli in Drosophila Hemocytes by RNA Chaperone Hfq.
Q36178987Mycoplasma non-coding RNA: identification of small RNAs and targets
Q34056874Pleiotropic role of the RNA chaperone protein Hfq in the human pathogen Clostridium difficile
Q38842729RNA- and protein-mediated control of Listeria monocytogenes virulence gene expression
Q45095625RNAs: regulators of bacterial virulence
Q34557250Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome
Q34240871Recognition of U-rich RNA by Hfq from the Gram-positive pathogen Listeria monocytogenes.
Q34122762Revisiting the coding potential of the E. coli genome through Hfq co-immunoprecipitation
Q38344415Role of Hfq in iron-dependent and -independent gene regulation in Neisseria meningitidis.
Q38187359Small RNA regulators in bacteria: powerful tools for metabolic engineering and synthetic biology
Q24641915Small RNAs encoded within genetic islands of Salmonella typhimurium show host-induced expression and role in virulence
Q26852464Small RNAs, 5' UTR elements and RNA-binding proteins in intracellular bacteria: impact on metabolism and virulence
Q35155330Small Regulatory RNA and Legionella pneumophila.
Q24645276Small non-coding RNAs in Streptomyces coelicolor
Q42500644Small regulatory RNAs control the multi-cellular adhesive lifestyle of Escherichia coli.
Q38191748Small regulatory RNAs from low-GC Gram-positive bacteria
Q27672887Structural mechanism of Staphylococcus aureus Hfq binding to an RNA A-tract
Q35829452Survival of Listeria monocytogenes in Soil Requires AgrA-Mediated Regulation
Q33316865Temporal transcriptomic analysis of the Listeria monocytogenes EGD-e sigmaB regulon
Q38296490The C-terminal domain of Escherichia coli Hfq is required for regulation
Q28131414The Listeria transcriptional landscape from saprophytism to virulence.
Q26773438The Mechanisms of Virulence Regulation by Small Noncoding RNAs in Low GC Gram-Positive Pathogens
Q54205177The RNA-binding protein Hfq is important for ribosome biogenesis and affects translation fidelity.
Q53622040The Regulatory Roles of ncRNA Rli60 in Adaptability of Listeria monocytogenes to Environmental Stress and Biofilm Formation.
Q58125764The Roles of Two Genes in the Virulence and Stress Resistance of
Q33851489The Staphylococcus aureus RNome and its commitment to virulence
Q33522323The bacterial pathogen Listeria monocytogenes: an emerging model in prokaryotic transcriptomics
Q37995707The bacterial protein Hfq: much more than a mere RNA-binding factor
Q35017796The intracellular sRNA transcriptome of Listeria monocytogenes during growth in macrophages
Q36189994The multicopy sRNA LhrC controls expression of the oligopeptide-binding protein OppA in Listeria monocytogenes
Q37984186The non-coding RNA world of the bacterial pathogen Listeria monocytogenes
Q37800058The roles of pathogen small RNAs
Q28546723Tracking the Elusive Function of Bacillus subtilis Hfq
Q42368463Transcriptomic Analysis of the Adaptation of Listeria monocytogenes to Lagoon and Soil Matrices Associated with a Piggery Environment: Comparison of Expression Profiles
Q34483774Transcriptomic and phenotypic analyses identify coregulated, overlapping regulons among PrfA, CtsR, HrcA, and the alternative sigma factors sigmaB, sigmaC, sigmaH, and sigmaL in Listeria monocytogenes
Q24684847Translational control and target recognition by Escherichia coli small RNAs in vivo
Q37237994Two novel members of the LhrC family of small RNAs in Listeria monocytogenes with overlapping regulatory functions but distinctive expression profiles
Q57456017Two virulent sRNAs identified by genomic sequencing target the type III secretion system in rice bacterial blight pathogen
Q46260153Unraveling the evolution and coevolution of small regulatory RNAs and coding genes in Listeria
Q34376087sRNAdb: a small non-coding RNA database for gram-positive bacteria

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