An antibody-based microarray assay for small RNA detection

scientific article

An antibody-based microarray assay for small RNA detection is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/NAR/GKL142
P932PMC publication ID1435976
P698PubMed publication ID16614443
P5875ResearchGate publication ID7166680

P50authorSusan GottesmanQ19642513
Aixia ZhangQ125315719
Gisela StorzQ29470553
Stephen H. LepplaQ59127270
P2093author name stringZonglin Hu
P2860cites workComparison of poly(A)·poly(dT) and poly(I)·poly(dC) as immunogens for the induction of antibodies to RNA-DNA hybridsQ72671063
Getting the noise out of gene arraysQ80894991
Identification of novel small RNAs using comparative genomics and microarraysQ24601229
Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coliQ24684800
Quantitative monitoring of gene expression patterns with a complementary DNA microarrayQ27861102
Global analysis of small RNA and mRNA targets of HfqQ28184898
Role of microRNAs in plant and animal developmentQ28188025
The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAsQ28216159
The small RNA regulators of Escherichia coli: roles and mechanisms*Q29618536
The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) proteinQ33889724
Genomics, gene expression and DNA arraysQ33906813
DNA microarray technology: devices, systems, and applicationsQ34138762
Characterization of monoclonal antibody to DNA.RNA and its application to immunodetection of hybridsQ34384604
Controlling mRNA stability and translation with small, noncoding RNAsQ35737955
An abundance of RNA regulatorsQ36161159
Monoclonal antibody solution hybridization assay for detection of mouse hepatitis virus infectionQ37117357
A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutatorQ48047346
Immunochemical approaches to gene probe assaysQ68993210
P4510describes a project that usesS9.6Q54951981
P433issue7
P407language of work or nameEnglishQ1860
P921main subjectantibodyQ79460
cell lineQ21014462
P304page(s)e52
P577publication date2006-04-13
P1433published inNucleic Acids ResearchQ135122
P1476titleAn antibody-based microarray assay for small RNA detection
P478volume34

Reverse relations

cites work (P2860)
Q92938675Amperometric Biosensing of miRNA-21 in Serum and Cancer Cells at Nanostructured Platforms Using Anti-DNA-RNA Hybrid Antibodies
Q34864846Analysis of Escherichia coli RNase E and RNase III activity in vivo using tiling microarrays
Q35136779Anti-DNA:RNA antibodies and silicon photonic microring resonators: increased sensitivity for multiplexed microRNA detection.
Q38228454Antibodies specific for nucleic acids and applications in genomic detection and clinical diagnostics
Q94131581Article Watch
Q34537427Bacterial antisense RNAs: how many are there, and what are they doing?
Q38185669Biosensor-based microRNA detection: techniques, design, performance, and challenges.
Q39034954Combining electron microscopy with single molecule DNA fiber approaches to study DNA replication dynamics
Q34942970Comparative analysis of non-coding RNAs in the antibiotic-producing Streptomyces bacteria
Q35609131Complexities due to single-stranded RNA during antibody detection of genomic rna:dna hybrids
Q90057553Current insights into the mechanism of mammalian immunoglobulin class switch recombination
Q38937702Cytosolic RNA:DNA hybrids activate the cGAS-STING axis
Q34044319DNA damage triggers SAF-A and RNA biogenesis factors exclusion from chromatin coupled to R-loops removal.
Q47583628DNA-RNA interactions are critical for chromosome condensation in Escherichia coli
Q36881872Dynamic transcriptome of Schizosaccharomyces pombe shown by RNA-DNA hybrid mapping
Q34888345Genome-wide analyses in bacteria show small-RNA enrichment for long and conserved intergenic regions
Q34415765Genome-wide profiling of yeast DNA:RNA hybrid prone sites with DRIP-chip
Q49607674Immunoprecipitation of RNA:DNA Hybrids from Budding Yeast
Q31066785Integration of omics data: how well does it work for bacteria?
Q37734389Kub5-Hera, the human Rtt103 homolog, plays dual functional roles in transcription termination and DNA repair.
Q33540296Large-scale transcriptome data reveals transcriptional activity of fission yeast LTR retrotransposons
Q91650145Loss of TOP3B leads to increased R-loop formation and genome instability
Q30435228Loss of Topoisomerase I leads to R-loop-mediated transcriptional blocks during ribosomal RNA synthesis
Q90183082MRE11-RAD50-NBS1 promotes Fanconi Anemia R-loop suppression at transcription-replication conflicts
Q28244052MicL, a new σE-dependent sRNA, combats envelope stress by repressing synthesis of Lpp, the major outer membrane lipoprotein
Q34322538Mutations in interaction surfaces differentially impact E. coli Hfq association with small RNAs and their mRNA targets
Q36363548Noncoding RNAs binding to the nucleoid protein HU in Escherichia coli
Q21144865Out of balance: R-loops in human disease
Q47096369PRPF8 is important for BRCA1-mediated homologous recombination
Q36371398Pericentromeric satellite repeat expansions through RNA-derived DNA intermediates in cancer
Q36245879Proteomic Analysis of Dhh1 Complexes Reveals a Role for Hsp40 Chaperone Ydj1 in Yeast P-Body Assembly
Q28469313Quantitative characteristics of gene regulation by small RNA
Q39033272R-Loop Depletion by Over-expressed RNase H1 in Mouse B Cells Increases Activation-Induced Deaminase Access to the Transcribed Strand without Altering Frequency of Isotype Switching
Q34258378R-loop formation is a distinctive characteristic of unmethylated human CpG island promoters
Q35740611R-loop-mediated genome instability in mRNA cleavage and polyadenylation mutants
Q92932408R-loops: formation, function, and relevance to cell stress
Q46282367RECQ-like helicases Sgs1 and BLM regulate R-loop-associated genome instability
Q45054633RNA-DNA hybrid (R-loop) immunoprecipitation mapping: an analytical workflow to evaluate inherent biases.
Q104064781Rapid lateral flow immunoassay for the fluorescence detection of SARS-CoV-2 RNA
Q35911347Regulated Formation of lncRNA-DNA Hybrids Enables Faster Transcriptional Induction and Environmental Adaptation
Q36002520Ribonucleoprotein-masked nicks at 50-kbp intervals in the eukaryotic genomic DNA.
Q30368627S1-DRIP-seq identifies high expression and polyA tracts as major contributors to R-loop formation.
Q50789005SNF2 Family Protein Fft3 Suppresses Nucleosome Turnover to Promote Epigenetic Inheritance and Proper Replication.
Q27935087Senataxin associates with replication forks to protect fork integrity across RNA-polymerase-II-transcribed genes
Q34672035Senataxin plays an essential role with DNA damage response proteins in meiotic recombination and gene silencing
Q24645276Small non-coding RNAs in Streptomyces coelicolor
Q33793569Strand-specific transcriptome profiling with directly labeled RNA on genomic tiling microarrays
Q38759837Sustained expression of FMR1 mRNA from reactivated fragile X syndrome alleles after treatment with small molecules that prevent trimethylation of H3K27.
Q39174065Targeting GLI by GANT61 involves mechanisms dependent on inhibition of both transcription and DNA licensing
Q63977008Telomeric RNA-DNA hybrids affect telomere-length dynamics and senescence
Q38677249The Antisense Transcriptome and the Human Brain.
Q27929516The THO complex component Thp2 counteracts telomeric R-loops and telomere shortening
Q36396026The monoclonal S9.6 antibody exhibits highly variable binding affinities towards different R-loop sequences
Q38942027The role of G-density in switch region repeats for immunoglobulin class switch recombination
Q38975929The strength of an Ig switch region is determined by its ability to drive R loop formation and its number of WGCW sites
Q33771737The sub-nanomolar binding of DNA-RNA hybrids by the single-chain Fv fragment of antibody S9.6.
Q93229535Transformation-induced stress at telomeres is counteracted through changes in the telomeric proteome including SAMHD1
Q44744271Validation of two ribosomal RNA removal methods for microbial metatranscriptomics
Q36082634XRN2 Links Transcription Termination to DNA Damage and Replication Stress
Q34157855Yeast Sen1 helicase protects the genome from transcription-associated instability.

Q54951981S9.6described by sourceP1343

Search more.