The small RNA SgrS: roles in metabolism and pathogenesis of enteric bacteria

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The small RNA SgrS: roles in metabolism and pathogenesis of enteric bacteria is …
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scholarly articleQ13442814
review articleQ7318358

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P356DOI10.3389/FCIMB.2014.00061
P8608Fatcat IDrelease_5kgollq3wvgzre5m5kjqaupeqm
P3181OpenCitations bibliographic resource ID127494
P932PMC publication ID4021124
P698PubMed publication ID24847473
P5875ResearchGate publication ID262532938

P2093author name stringCarin K Vanderpool
Maksym Bobrovskyy
P2860cites workA small RNA regulates the expression of genes involved in iron metabolism in Escherichia coliQ24536169
Translational repression is sufficient for gene silencing by bacterial small noncoding RNAs in the absence of mRNA destructionQ24546344
Hfq is necessary for regulation by the untranslated RNA DsrAQ24548921
Activation of alpha-toxin translation in Staphylococcus aureus by the trans-encoded antisense RNA, RNAIIIQ24598365
The small RNA SgrS controls sugar-phosphate accumulation by regulating multiple PTS genesQ24598644
Physiological consequences of multiple-target regulation by the small RNA SgrS in Escherichia coliQ24605734
Two antisense RNAs target the transcriptional regulator CsgD to inhibit curli synthesisQ24633959
Functional and biochemical characterization of Escherichia coli sugar efflux transporters.Q52535986
How the ribosome moves along the mRNA during protein synthesis.Q53014507
NaF inhibition of phosphorylation and dephosphorylation involved in -methyl-D glucoside transport in E. coli K 12. A pH dependant phenomenon sensitive to uncoupling agents.Q54675294
Phosphoenolpyruvate:carbohydrate phosphotransferase systems of bacteriaQ24634652
Riboregulation in Escherichia coli: DsrA RNA acts by RNA:RNA interactions at multiple lociQ24645507
Small RNA-induced differential degradation of the polycistronic mRNA iscRSUAQ24649054
Homologs of the small RNA SgrS are broadly distributed in enteric bacteria but have diverged in size and sequenceQ24654070
A small RNA regulates multiple ABC transporter mRNAs by targeting C/A-rich elements inside and upstream of ribosome-binding sitesQ24672099
Spot 42 RNA mediates discoordinate expression of the E. coli galactose operonQ24674172
A dual function for a bacterial small RNA: SgrS performs base pairing-dependent regulation and encodes a functional polypeptideQ24683800
The novel transcription factor SgrR coordinates the response to glucose-phosphate stressQ24683850
Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coliQ24684800
Structure of Escherichia coli Hfq bound to polyriboadenylate RNAQ27658064
Global analysis of small RNA and mRNA targets of HfqQ28184898
The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAsQ28216159
Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiationQ28252581
Base-pairing requirement for RNA silencing by a bacterial small RNA and acceleration of duplex formation by HfqQ28253347
Noncanonical repression of translation initiation through small RNA recruitment of the RNA chaperone HfqQ28263595
A minimal base-pairing region of a bacterial small RNA SgrS required for translational repression of ptsG mRNAQ28277876
The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNAQ28288672
Small RNA-mediated activation of sugar phosphatase mRNA regulates glucose homeostasisQ28288849
Involvement of a novel transcriptional activator and small RNA in post-transcriptional regulation of the glucose phosphoenolpyruvate phosphotransferase systemQ28291273
Escherichia coli Hfq has distinct interaction surfaces for DsrA, rpoS and poly(A) RNAsQ28292183
An antisense RNA inhibits translation by competing with standby ribosomesQ28302101
The small RNA RyhB activates the translation of shiA mRNA encoding a permease of shikimate, a compound involved in siderophore synthesisQ28304722
Small RNA binding to 5' mRNA coding region inhibits translational initiationQ28305161
SopD acts cooperatively with SopB during Salmonella enterica serovar Typhimurium invasionQ28490050
SopD2 is a novel type III secreted effector of Salmonella typhimurium that targets late endocytic compartments upon delivery into host cellsQ28490058
The related effector proteins SopD and SopD2 from Salmonella enterica serovar Typhimurium contribute to virulence during systemic infection of miceQ28563577
Carbon catabolite repression in bacteria: many ways to make the most out of nutrientsQ29615329
RNase E-based ribonucleoprotein complexes: mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAsQ29619938
The bacterial Sm-like protein Hfq: a key player in RNA transactionsQ29620062
Efflux and the steady state in alpha-methylglucoside transport in Escherichia coli.Q30451487
An upstream Hfq binding site in the fhlA mRNA leader region facilitates the OxyS-fhlA interactionQ33712153
Positive regulation by small RNAs and the role of HfqQ34006620
Stabilization of Clostridium perfringens collagenase mRNA by VR-RNA-dependent cleavage in 5' leader sequenceQ34122376
Genetics and Regulation of the Major Enzymes of Alanine Synthesis inEscherichia coliQ34177935
Mutations in interaction surfaces differentially impact E. coli Hfq association with small RNAs and their mRNA targetsQ34322538
Computer analysis of bacterial haloacid dehalogenases defines a large superfamily of hydrolases with diverse specificity. Application of an iterative approach to database searchQ34326151
Regulation and Function of Escherichia coli Sugar Efflux Transporter A (SetA) during Glucose-Phosphate StressQ34485023
The RNA degradosome of Escherichia coli: an mRNA-degrading machine assembled on RNase E.Q34621048
Rapid binding and release of Hfq from ternary complexes during RNA annealingQ35088007
All things must pass: contrasts and commonalities in eukaryotic and bacterial mRNA decayQ35133366
PolyU tail of rho-independent terminator of bacterial small RNAs is essential for Hfq actionQ35164771
The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pairQ35882335
Requirement of upstream Hfq-binding (ARN)x elements in glmS and the Hfq C-terminal region for GlmS upregulation by sRNAs GlmZ and GlmY.Q36228436
Small RNA binding-site multiplicity involved in translational regulation of a polycistronic mRNA.Q36342728
HEREDITARY DEFECTS IN GALACTOSE METABOLISM IN ESCHERICHIA COLI MUTANTS, II. GALACTOSE-INDUCED SENSITIVITY.Q36431054
How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteriaQ36678721
RNA, but not protein partners, is directly responsible for translational silencing by a bacterial Hfq-binding small RNA.Q36802626
Deciphering the interplay between two independent functions of the small RNA regulator SgrS in SalmonellaQ37252988
Depletion of glycolytic intermediates plays a key role in glucose-phosphate stress in Escherichia coliQ37253130
Characterization of homologs of the small RNA SgrS reveals diversity in functionQ37384780
Endonucleolytic initiation of mRNA decay in Escherichia coliQ37392496
Killer and protective ribosomesQ37392525
L-Arabinose-sensitive, L-ribulose 5-phosphate 4-epimerase-deficient mutants of Escherichia coliQ37422123
Cellular stress created by intermediary metabolite imbalancesQ37428955
Metabolite changes signal genetic regulatory mechanisms for robust cell behaviorQ37519874
New insights into small RNA-dependent translational regulation in prokaryotesQ38058965
Properties of Escherichia coli Mutants Deficient in Enzymes of GlycolysisQ39989051
Footprinting mRNA-ribosome complexes with chemical probesQ40792928
RNAs actively cycle on the Sm-like protein Hfq.Q41429696
Small RNA-induced mRNA degradation achieved through both translation block and activated cleavageQ41912798
The seed region of a small RNA drives the controlled destruction of the target mRNA by the endoribonuclease RNase E.Q42428502
A small RNA activates CFA synthase by isoform-specific mRNA stabilizationQ42883177
The functional Hfq-binding module of bacterial sRNAs consists of a double or single hairpin preceded by a U-rich sequence and followed by a 3' poly(U) tailQ43149694
Accumulation of glucose 6-phosphate or fructose 6-phosphate is responsible for destabilization of glucose transporter mRNA in Escherichia coliQ44310039
P275copyright licenseCreative Commons Attribution 3.0 UnportedQ14947546
P6216copyright statuscopyrightedQ50423863
P407language of work or nameEnglishQ1860
P921main subjectbacteriaQ10876
pathogenesisQ372016
P304page(s)61
P577publication date2014-01-01
2014-05-08
P1433published inFrontiers in Cellular and Infection MicrobiologyQ27724376
P1476titleThe small RNA SgrS: roles in metabolism and pathogenesis of enteric bacteria
P478volume4

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cites work (P2860)
Q37349225A Prophage-Encoded Small RNA Controls Metabolism and Cell Division in Escherichia coli
Q37086779A metabolic intermediate of the fructose-asparagine utilization pathway inhibits growth of a Salmonella fraB mutant
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Q38983056Dual-function small regulatory RNAs in bacteria
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Q89824505On a stake-out: Mycobacterial small RNA identification and regulation
Q37481741Quorum Sensing Coordinates Cooperative Expression of Pyruvate Metabolism Genes To Maintain a Sustainable Environment for Population Stability
Q38839256RNA-based mechanisms of virulence control in Enterobacteriaceae
Q64981026Regulation of Transcription Termination of Small RNAs and by Small RNAs: Molecular Mechanisms and Biological Functions.
Q35833760The Staphylococcus aureus protein-coding gene gdpS modulates sarS expression via mRNA-mRNA interaction
Q61806336sRNA Target Prediction Organizing Tool (SPOT) Integrates Computational and Experimental Data To Facilitate Functional Characterization of Bacterial Small RNAs

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