Analyses of mRNA destabilization and translational inhibition mediated by Hfq-binding small RNAs

scientific article published in January 2008

Analyses of mRNA destabilization and translational inhibition mediated by Hfq-binding small RNAs is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1016/S0076-6879(08)02218-0
P698PubMed publication ID19161852

P2093author name stringHiroji Aiba
Teppei Morita
Kimika Maki
Mieko Yagi
P2860cites workA small RNA regulates the expression of genes involved in iron metabolism in Escherichia coliQ24536169
Translational repression is sufficient for gene silencing by bacterial small noncoding RNAs in the absence of mRNA destructionQ24546344
Detection of 5'- and 3'-UTR-derived small RNAs and cis-encoded antisense RNAs in Escherichia coliQ24556624
Implication of membrane localization of target mRNA in the action of a small RNA: mechanism of post-transcriptional regulation of glucose transporter in Escherichia coliQ24557422
A small RNA acts as an antisilencer of the H-NS-silenced rcsA gene of Escherichia coliQ24563821
A unique mechanism regulating gene expression: translational inhibition by a complementary RNA transcript (micRNA)Q24594977
Identification of novel small RNAs using comparative genomics and microarraysQ24601229
RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteriaQ24641843
A dual function for a bacterial small RNA: SgrS performs base pairing-dependent regulation and encodes a functional polypeptideQ24683800
Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coliQ24684800
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR productsQ27860842
Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAsQ27861053
MicroRNAs: genomics, biogenesis, mechanism, and functionQ27861070
Global analysis of small RNA and mRNA targets of HfqQ28184898
A bioinformatics based approach to discover small RNA genes in the Escherichia coli genomeQ28205081
Novel small RNA-encoding genes in the intergenic regions of Escherichia coliQ28205853
The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAsQ28216159
Micros for microbes: non-coding regulatory RNAs in bacteriaQ28252632
Base-pairing requirement for RNA silencing by a bacterial small RNA and acceleration of duplex formation by HfqQ28253347
Regulation by let-7 and lin-4 miRNAs results in target mRNA degradationQ28268899
Involvement of a novel transcriptional activator and small RNA in post-transcriptional regulation of the glucose phosphoenolpyruvate phosphotransferase systemQ28291273
Mechanism of RNA silencing by Hfq-binding small RNAsQ28294833
Expression of the glucose transporter gene, ptsG, is regulated at the mRNA degradation step in response to glycolytic flux in Escherichia coliQ28343323
The small RNA regulators of Escherichia coli: roles and mechanisms*Q29618536
Hfq: a bacterial Sm-like protein that mediates RNA-RNA interactionQ29619904
RNase E-based ribonucleoprotein complexes: mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAsQ29619938
The bacterial Sm-like protein Hfq: a key player in RNA transactionsQ29620062
Epitope tagging of chromosomal genes in SalmonellaQ33953109
Controlling mRNA stability and translation with small, noncoding RNAsQ35737955
An abundance of RNA regulatorsQ36161159
Small RNAs making a small proteinQ36299789
Accumulation of glucose 6-phosphate or fructose 6-phosphate is responsible for destabilization of glucose transporter mRNA in Escherichia coliQ44310039
Enolase in the RNA degradosome plays a crucial role in the rapid decay of glucose transporter mRNA in the response to phosphosugar stress in Escherichia coliQ45135642
A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutatorQ48047346
TheEscherichia coliRNA degradosome: structure, function and relationship to other ribonucleolytic multienyzme complexesQ57486494
Factor Fraction required for the Synthesis of Bacteriophage Qβ-RNAQ59097796
P407language of work or nameEnglishQ1860
P304page(s)359-378
P577publication date2008-01-01
P1433published inMethods in EnzymologyQ2076903
P1476titleAnalyses of mRNA destabilization and translational inhibition mediated by Hfq-binding small RNAs
P478volume447

Reverse relations

cites work (P2860)
Q64113656A Small RNA Transforms the Multidrug Resistance of Pseudomonas aeruginosa to Drug Susceptibility
Q37252988Deciphering the interplay between two independent functions of the small RNA regulator SgrS in Salmonella
Q42014958Defining a role for Hfq in Gram-positive bacteria: evidence for Hfq-dependent antisense regulation in Listeria monocytogenes
Q37394272Evidence for the association of luteinizing hormone receptor mRNA-binding protein with the translating ribosomes during receptor downregulation
Q34202709Glucose uptake regulation in E. coli by the small RNA SgrS: comparative analysis of E. coli K-12 (JM109 and MG1655) and E. coli B (BL21)
Q42283711Horizontal transfer of DNA methylation patterns into bacterial chromosomes
Q33658485The regulatory protein RraA modulates RNA-binding and helicase activities of the E. coli RNA degradosome

Search more.