Small Regulatory RNAs in the Control of Motility and Biofilm Formation in E. coli and Salmonella

scientific article published on 26 February 2013

Small Regulatory RNAs in the Control of Motility and Biofilm Formation in E. coli and Salmonella is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.3390/IJMS14034560
P932PMC publication ID3634460
P698PubMed publication ID23443158
P5875ResearchGate publication ID235740205

P50authorRegine HenggeQ21264553
P2093author name stringFranziska Mika
P2860cites workThe csgD mRNA as a hub for signal integration via multiple small RNAs.Q54340513
Regulatory role of MlrA in transcription activation of csgD, the master regulator of biofilm formation in Escherichia coliQ54378624
The Escherichia coli CsrB and CsrC small RNAs are strongly induced during growth in nutrient-poor medium.Q54402937
The RcsC sensor kinase is required for normal biofilm formation in Escherichia coli K-12 and controls the expression of a regulon in response to growth on a solid surface.Q54514553
The curli biosynthesis regulator CsgD co-ordinates the expression of both positive and negative determinants for biofilm formation in Escherichia coliQ54517658
RcsCDB His-Asp phosphorelay system negatively regulates the flhDC operon in Escherichia coli.Q54521795
Regulation of the Escherichia coli csgD promoter: interplay between five transcription factorsQ64449100
The outer membrane protein, antigen 43, mediates cell-to-cell interactions within Escherichia coli biofilmsQ64449674
Two novel flagellar components and H-NS are involved in the motor function of Escherichia coliQ73076418
Genetic analysis of Escherichia coli biofilm formation: roles of flagella, motility, chemotaxis and type I piliQ77472923
Escherichia coli tol and rcs genes participate in the complex network affecting curli synthesisQ80341268
The Escherichia coli OxyS regulatory RNA represses fhlA translation by blocking ribosome bindingQ24533360
Hfq-dependent regulation of OmpA synthesis is mediated by an antisense RNA.Q24536474
The small RNA, DsrA, is essential for the low temperature expression of RpoS during exponential growth in Escherichia coliQ24562141
GadY, a small-RNA regulator of acid response genes in Escherichia coliQ24563573
A small RNA acts as an antisilencer of the H-NS-silenced rcsA gene of Escherichia coliQ24563821
Identification of novel small RNAs using comparative genomics and microarraysQ24601229
The c-di-GMP binding protein YcgR controls flagellar motor direction and speed to affect chemotaxis by a "backstop brake" mechanismQ24624328
Two antisense RNAs target the transcriptional regulator CsgD to inhibit curli synthesisQ24633959
Signals, regulatory networks, and materials that build and break bacterial biofilmsQ24644554
DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcriptionQ24645477
Riboregulation in Escherichia coli: DsrA RNA acts by RNA:RNA interactions at multiple lociQ24645507
Caught at its own game: regulatory small RNA inactivated by an inducible transcript mimicking its targetQ24647466
SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decayQ24669800
Diversity, biogenesis and function of microbial amyloidsQ26830678
Regulation by small RNAs in bacteria: expanding frontiersQ27009044
Bacterial small RNA regulators: versatile roles and rapidly evolving variationsQ27692531
Regulation of RpoS by a novel small RNA: the characterization of RprAQ28204998
Regulation and mode of action of the second small RNA activator of RpoS translation, RprAQ28212671
The RNA Molecule CsrB Binds to the Global Regulatory Protein CsrA and Antagonizes Its Activity in Escherichia coliQ28242964
Small RNAs endow a transcriptional activator with essential repressor functions for single-tier control of a global stress regulonQ28243536
Switching off small RNA regulation with trap-mRNAQ28255082
A conserved RpoS-dependent small RNA controls the synthesis of major porin OmpDQ28255704
Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNAQ28257497
Motility influences biofilm architecture in Escherichia coli.Q51292665
CsrA post-transcriptionally represses pgaABCD, responsible for synthesis of a biofilm polysaccharide adhesin of Escherichia coli.Q52564428
Cyclic-di-GMP-mediated signalling within the sigma network of Escherichia coli.Q52930158
Targeting of csgD by the small regulatory RNA RprA links stationary phase, biofilm formation and cell envelope stress in Escherichia coliQ28260482
Conserved small non-coding RNAs that belong to the sigmaE regulon: role in down-regulation of outer membrane proteinsQ28265898
Remodelling of the Escherichia coli outer membrane by two small regulatory RNAsQ28287313
The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNAQ28288672
Integrating anaerobic/aerobic sensing and the general stress response through the ArcZ small RNAQ28289704
Biofilms: the matrix revisitedQ28301704
The biofilm matrixQ29547334
Principles of c-di-GMP signalling in bacteriaQ29615333
Hfq and its constellation of RNAQ29615791
MlrA, a novel regulator of curli (AgF) and extracellular matrix synthesis by Escherichia coli and Salmonella enterica serovar TyphimuriumQ30698138
CpxR/OmpR interplay regulates curli gene expression in response to osmolarity in Escherichia coliQ33714541
Escherichia coli biofilms.Q33830279
The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) proteinQ33889724
Acid stress response in Escherichia coli: mechanism of regulation of gadA transcription by RcsB and GadE.Q33922436
Complex regulatory network encompassing the Csr, c-di-GMP and motility systems of Salmonella TyphimuriumQ33924559
Complex regulatory network controls initial adhesion and biofilm formation in Escherichia coli via regulation of the csgD gene.Q33997251
Small non-coding RNAs and the bacterial outer membraneQ34000397
Positive regulation by small RNAs and the role of HfqQ34006620
Dealing with oxidative stress and iron starvation in microorganisms: an overviewQ34022066
Base pairing small RNAs and their roles in global regulatory networksQ34061171
Spatial periodicity of Escherichia coli K-12 biofilm microstructure initiates during a reversible, polar attachment phase of development and requires the polysaccharide adhesin PGA.Q34231036
A complex network of small non-coding RNAs regulate motility in Escherichia coliQ34296188
Regulatory circuitry of the CsrA/CsrB and BarA/UvrY systems of Escherichia coliQ34318260
PilZ domain is part of the bacterial c-di-GMP binding proteinQ34462823
RNase III participates in GadY-dependent cleavage of the gadX-gadW mRNA.Q34538123
Mechanisms of cyclic-di-GMP signaling in bacteriaQ34555268
The PilZ domain is a receptor for the second messenger c-di-GMP: the PilZ domain protein YcgR controls motility in enterobacteriaQ34559000
Role of the biofilm master regulator CsgD in cross-regulation between biofilm formation and flagellar synthesisQ35096120
Identification of the promoter region for the colanic acid polysaccharide biosynthetic genes in Escherichia coli K-12.Q35609880
A small RNA that regulates motility and biofilm formation in response to changes in nutrient availability in Escherichia coli.Q35854632
A role for Rho-dependent polarity in gene regulation by a noncoding small RNAQ36186387
The Rcs phosphorelay: a complex signal transduction systemQ36253588
The Cpx system of Escherichia coli, a strategic signaling pathway for confronting adverse conditions and for settling biofilm communities?Q36400106
Curli biogenesis and functionQ36480477
Escherichia coli noncoding RNAs can affect gene expression and physiology of Caenorhabditis elegansQ36855904
Innate and induced resistance mechanisms of bacterial biofilmsQ37153211
Coordinating assembly of a bacterial macromolecular machineQ37165158
The RNA binding protein CsrA controls cyclic di-GMP metabolism by directly regulating the expression of GGDEF proteinsQ37326145
Identification of a quinone-sensitive redox switch in the ArcB sensor kinase.Q37513333
The sweet connection: Solving the riddle of multiple sugar-binding fimbrial adhesins in Escherichia coli: Multiple E. coli fimbriae form a versatile arsenal of sugar-binding lectins potentially involved in surface-colonisation and tissue tropismQ37846185
Post-transcriptional regulation on a global scale: form and function of Csr/Rsm systems.Q38016604
Positive regulation of motility and flhDC expression by the RNA-binding protein CsrA of Escherichia coliQ38302059
Role for the histone-like protein H-NS in growth phase-dependent and osmotic regulation of sigma S and many sigma S-dependent genes in Escherichia coliQ39474355
Curli fibers are highly conserved between Salmonella typhimurium and Escherichia coli with respect to operon structure and regulation.Q39564510
The ClpXP ATP-dependent protease regulates flagellum synthesis in Salmonella enterica serovar typhimurium.Q39694510
A two-component phosphotransfer network involving ArcB, ArcA, and RssB coordinates synthesis and proteolysis of sigmaS (RpoS) in E. coliQ39705576
Posttranscriptional osmotic regulation of the sigma(s) subunit of RNA polymerase in Escherichia coliQ39840619
Genome-wide analyses revealing a signaling network of the RcsC-YojN-RcsB phosphorelay system in Escherichia coliQ39887844
The global repressor FliZ antagonizes gene expression by σS-containing RNA polymerase due to overlapping DNA binding specificityQ41776471
Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivityQ41863185
Molecular function and potential evolution of the biofilm-modulating blue light-signalling pathway of Escherichia coli.Q42065060
Inverse regulatory coordination of motility and curli-mediated adhesion in Escherichia coliQ42128041
Salmonella biofilm development depends on the phosphorylation status of RcsB.Q42231667
Adaptation in bacterial flagellar and motility systems: from regulon members to 'foraging'-like behavior in E. coliQ42430233
Small regulatory RNAs control the multi-cellular adhesive lifestyle of Escherichia coli.Q42500644
Cellular levels and activity of the flagellar sigma factor FliA of Escherichia coli are controlled by FlgM-modulated proteolysisQ42513411
A CsgD-independent pathway for cellulose production and biofilm formation in Escherichia coliQ42941097
The BLUF-EAL protein YcgF acts as a direct anti-repressor in a blue-light response of Escherichia coliQ43172750
The multicellular morphotypes of Salmonella typhimurium and Escherichia coli produce cellulose as the second component of the extracellular matrixQ43641254
Second messenger-mediated adjustment of bacterial swimming velocityQ44130151
GadX/GadW-dependent regulation of the Escherichia coli acid fitness island: transcriptional control at the gadY-gadW divergent promoters and identification of four novel 42 bp GadX/GadW-specific binding sitesQ45745812
Second messenger signalling governs Escherichia coli biofilm induction upon ribosomal stress.Q46002172
AgfD, the checkpoint of multicellular and aggregative behaviour in Salmonella typhimurium regulates at least two independent pathwaysQ47870324
Multicellular and aggregative behaviour of Salmonella typhimurium strains is controlled by mutations in the agfD promoterQ47986866
A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutatorQ48047346
Hfq and Hfq-dependent small RNAs are major contributors to multicellular development in Salmonella enterica serovar TyphimuriumQ50030594
Expression of cellulose and curli fimbriae by Escherichia coli isolated from the gastrointestinal tractQ50085741
Complex regulation of csgD promoter activity by global regulatory proteinsQ50103377
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue3
P407language of work or nameEnglishQ1860
P921main subjectEscherichia coliQ25419
biofilmQ467410
P304page(s)4560-4579
P577publication date2013-02-26
P1433published inInternational Journal of Molecular SciencesQ3153277
P1476titleSmall Regulatory RNAs in the Control of Motility and Biofilm Formation in E. coli and Salmonella
P478volume14

Reverse relations

cites work (P2860)
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