U-turns and regulatory RNAs

scientific article

U-turns and regulatory RNAs is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

External links are
P356DOI10.1016/S1369-5274(00)00069-2
P698PubMed publication ID10744992

P2093author name stringGerdes K
Franch T
P2860cites workThe Escherichia coli OxyS regulatory RNA represses fhlA translation by blocking ribosome bindingQ24533360
The small RNA, DsrA, is essential for the low temperature expression of RpoS during exponential growth in Escherichia coliQ24562141
A small RNA acts as an antisilencer of the H-NS-silenced rcsA gene of Escherichia coliQ24563821
Activation of alpha-toxin translation in Staphylococcus aureus by the trans-encoded antisense RNA, RNAIIIQ24598365
DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcriptionQ24645477
Riboregulation in Escherichia coli: DsrA RNA acts by RNA:RNA interactions at multiple lociQ24645507
Identification and molecular characterization of csrA, a pleiotropic gene from Escherichia coli that affects glycogen biosynthesis, gluconeogenesis, cell size, and surface propertiesQ24669943
Identification of a global repressor gene, rsmA, of Erwinia carotovora subsp. carotovora that controls extracellular enzymes, N-(3-oxohexanoyl)-L-homoserine lactone, and pathogenicity in soft-rotting Erwinia sppQ24670269
Three-dimensional structure of a hammerhead ribozymeQ27730774
The structure of an essential splicing element: stem loop IIa from yeast U2 snRNAQ27745750
HIV-1 A-rich RNA loop mimics the tRNA anticodon structureQ27766274
The RNA Molecule CsrB Binds to the Global Regulatory Protein CsrA and Antagonizes Its Activity in Escherichia coliQ28242964
Antisense RNA-regulated programmed cell deathQ28259967
Oxidative stressQ33632507
The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) proteinQ33889724
Pleiotropic regulation of central carbohydrate metabolism in Escherichia coli via the gene csrA.Q34289885
Structural domains of transfer RNA moleculesQ34321933
The RNA-binding protein HF-I, known as a host factor for phage Qbeta RNA replication, is essential for rpoS translation in Escherichia coliQ34383062
An RNA pseudoknot as the molecular switch for translation of the repZ gene encoding the replication initiator of IncIalpha plasmid ColIb-P9.Q34466018
The product of the pleiotropic Escherichia coli gene csrA modulates glycogen biosynthesis via effects on mRNA stabilityQ35585353
The global regulator CsrA of Escherichia coli is a specific mRNA-binding proteinQ35626642
Mechanism of binding of the antisense and target RNAs involved in the regulation of IncB plasmid replicationQ36107254
Identification of specific Rp-phosphate oxygens in the tRNA anticodon loop required for ribosomal P-site bindingQ36709700
Ribonuclease III processing of coaxially stacked RNA helicesQ38320907
Posttranscriptional repression of Escherichia coli OmpF protein in response to redox stress: positive control of the micF antisense RNA by the soxRS locusQ39884580
Antisense RNA control in bacteria, phages, and plasmidsQ40573014
The uridine in "U-turn": contributions to tRNA-ribosomal bindingQ43206416
Identification and sequence analysis of the gene encoding the transcriptional activator of the formate hydrogenlyase system of Escherichia coliQ45020757
Characterization of a novel RNA regulator of Erwinia carotovora ssp. carotovora that controls production of extracellular enzymes and secondary metabolitesQ47694418
Calculating the electrostatic properties of RNA provides new insights into molecular interactions and functionQ47901588
A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutatorQ48047346
Electrical potential of transfer RNAs: codon-anticodon recognition.Q52424563
Antisense RNA control of plasmid R1 replication. The dominant product of the antisense rna-mrna binding is not a full RNA duplex.Q54566041
Insertion sequence IS10 anti-sense pairing initiates by an interaction between the 5' end of the target RNA and a loop in the anti-sense RNA.Q54721541
Control of ColE1 plasmid replication. Intermediates in the binding of RNA I and RNA IIQ67657375
Complexes formed by complementary RNA stem-loops. Their formations, structures and interaction with ColE1 Rom proteinQ67698548
Codon-induced association of the isolated anticodon loop of tRNAPheQ68921813
Anticodon-anticodon interactions in solution. Studies of the self-association of yeast or Escherichia coli tRNAAsp and of their interactions with Escherichia coli tRNAValQ68941037
Structure of a hexanucleotide RNA hairpin loop conserved in ribosomal RNAsQ71072610
Antisense RNA regulation in prokaryotes: rapid RNA/RNA interaction facilitated by a general U-turn loop structureQ73277820
Structural basis for binding of the plasmid ColIb-P9 antisense Inc RNA to its target RNA with the 5'-rUUGGCG-3' motif in the loop sequenceQ74495145
Global regulation by the small RNA-binding protein CsrA and the non-coding RNA molecule CsrBQ77442679
Kissing and RNA stability in antisense control of plasmid replicationQ77734631
P433issue2
P304page(s)159-164
P577publication date2000-04-01
P1433published inCurrent Opinion in MicrobiologyQ15752444
P1476titleU-turns and regulatory RNAs
P478volume3

Reverse relations

cites work (P2860)
Q456439365'-3' RNA-RNA interaction facilitates cap- and poly(A) tail-independent translation of tomato bushy stunt virus mrna: a potential common mechanism for tombusviridae
Q38292888A combinatorial approach to the repertoire of RNA kissing motifs; towards multiplex detection by switching hairpin aptamers
Q41975860A remarkably stable kissing-loop interaction defines substrate recognition by the Neurospora Varkud Satellite ribozyme.
Q42659981Analysis of the mechanism of action of the antisense RNA that controls the replication of the repABC plasmid p42d
Q35013448Antisense RNAs in plasmids: control of replication and maintenance
Q34129310Antisense-RNA regulation and RNA interference
Q48063237Antisense-RNA-mediated plasmid copy number control in pCG1-family plasmids, pCGR2 and pCG1, in Corynebacterium glutamicum
Q34537427Bacterial antisense RNAs: how many are there, and what are they doing?
Q40773279Conservation of RNA structures enables TNV and BYDV 5' and 3' elements to cooperate synergistically in cap-independent translation
Q36943396Exposing plasmids as the Achilles' heel of drug-resistant bacteria
Q54526305HIV-1 TAR as anchoring site for optimized catalytic RNAs.
Q34308667Helicobacter pylori 5'ureB-sRNA, a cis-encoded antisense small RNA, negatively regulates ureAB expression by transcription termination
Q34635353Impact of targeted vector design on Co/E1 plasmid replication
Q40325177In Vitro Characterization of the Type I Toxin-Antitoxin System bsrE/SR5 from Bacillus subtilis
Q37798025Influenza virus RNA structure: unique and common features
Q43956904Inhibition of HIV-1 replication and dimerization interference by dual inhibitory RNAs.
Q38353392Loop swapping in an antisense RNA/target RNA pair changes directionality of helix progression
Q38062722New type I toxin-antitoxin families from "wild" and laboratory strains of E. coli: Ibs-Sib, ShoB-OhsC and Zor-Orz
Q33994582Plasmid copy number control: an ever-growing story
Q34676099Progression of a loop-loop complex to a four-way junction is crucial for the activity of a regulatory antisense RNA
Q35012331RNA loop-loop interactions as dynamic functional motifs.
Q37309280RNA switches regulate initiation of translation in bacteria.
Q42561395RNA-based regulation of transcription and translation of aureusvirus subgenomic mRNA1.
Q34205029Regulatory circuits for plasmid survival
Q80022788Role of the RNA2 3' non-translated region of Blackcurrant reversion nepovirus in translational regulation
Q27324428Simultaneous characterization of cellular RNA structure and function with in-cell SHAPE-Seq
Q35696021Small RNA Transcriptome of the Oral Microbiome during Periodontitis Progression
Q24530293Small RNA genes expressed from Staphylococcus aureus genomic and pathogenicity islands with specific expression among pathogenic strains
Q58840824Stabilizing plasmid copy number to improve recombinant protein production
Q24629240Structural analysis of the Anti-Q-Qs interaction: RNA-mediated regulation of E. faecalis plasmid pCF10 conjugation
Q64897602Toxin⁻Antitoxin Systems in Bacillus subtilis.
Q42412374Transcriptional analysis of the genetic element pSSVx: differential and temporal regulation of gene expression reveals correlation between transcription and replication
Q26796753Use of siRNA molecular beacons to detect and attenuate mycobacterial infection in macrophages
Q34043559sRNAs in bacterial type I and type III toxin-antitoxin systems

Search more.