Archaeal extrachromosomal genetic elements

scientific article

Archaeal extrachromosomal genetic elements is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

External links are
P356DOI10.1128/MMBR.00042-14
P932PMC publication ID4402960
P698PubMed publication ID25694123

P50authorQunxin SheQ30439305
Shiraz A ShahQ30524385
P2093author name stringLi Huang
Nan Peng
Haina Wang
P2860cites workPH1: an archaeovirus of Haloarcula hispanica related to SH1 and HHIV-2Q21284857
Archaeal virus with exceptional virion architecture and the largest single-stranded DNA genomeQ21558621
Insights into dynamics of mobile genetic elements in hyperthermophilic environments from five new Thermococcus plasmidsQ21560741
Genomics of Bacterial and Archaeal Viruses: Dynamics within the Prokaryotic VirosphereQ22061800
Complete genome sequence of Haloterrigena turkmenica type strain (4k)Q22064364
The Genome of Sulfolobus acidocaldarius, a Model Organism of the CrenarchaeotaQ22065449
Genome Analyses of Icelandic Strains of Sulfolobus islandicus, Model Organisms for Genetic and Virus-Host Interaction StudiesQ22065480
Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschiiQ22065564
Living with two extremes: conclusions from the genome sequence of Natronomonas pharaonisQ22065744
Genome sequence of Haloarcula marismortui: a halophilic archaeon from the Dead SeaQ22065753
Environmental Diversity of Bacteria and ArchaeaQ22066163
Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and EucaryaQ22066209
Biogeography of the Sulfolobus islandicus pan-genomeQ22066289
Lateral gene transfer and the nature of bacterial innovationQ22122396
Sulfolobus tengchongensis spindle-shaped virus STSV1: virus-host interactions and genomic featuresQ24531963
Viral diversity in hot springs of Pozzuoli, Italy, and characterization of a unique archaeal virus, Acidianus bottle-shaped virus, from a new family, the AmpullaviridaeQ24533047
DNA-binding proteins and evolution of transcription regulation in the archaeaQ24548890
Phylogenetic structure of the prokaryotic domain: The primary kingdomsQ24564821
Related haloarchaeal pleomorphic viruses contain different genome typesQ24597427
Conserved sequence motifs in the initiator proteins for rolling circle DNA replication encoded by diverse replicons from eubacteria, eucaryotes and archaebacteriaQ24604023
Genomic analysis of Acidianus hospitalis W1 a host for studying crenarchaeal virus and plasmid life cyclesQ24609337
CRISPR-based adaptive immune systemsQ24609425
CDD: a Conserved Domain Database for the functional annotation of proteinsQ24610576
Role of vapBC toxin-antitoxin loci in the thermal stress response of Sulfolobus solfataricusQ24633505
Biology of DNA restrictionQ24634671
REBASE--a database for DNA restriction and modification: enzymes, genes and genomesQ24644735
Structural and functional studies of archaeal virusesQ24651853
A multicopy plasmid of the extremely thermophilic archaeon Sulfolobus effects its transfer to recipients by matingQ24671302
Origin and evolution of the archaeo-eukaryotic primase superfamily and related palm-domain proteins: structural insights and new membersQ24812840
Discovery of a novel restriction endonuclease by genome comparison and application of a wheat-germ-based cell-free translation assay: PabI (5'-GTA/C) from the hyperthermophilic archaeon Pyrococcus abyssiQ24813907
A virocentric perspective on the evolution of lifeQ26864700
CRISPR-Cas systems: Prokaryotes upgrade to adaptive immunityQ27014828
Structural plasticity of the Flp-Holliday junction complexQ27640404
Synergy of NMR, Computation, and X-Ray Crystallography for Structural BiologyQ27654758
Structure, Function, and Targets of the Transcriptional Regulator SvtR from the Hyperthermophilic Archaeal Virus SIRV1Q27656008
Acidianus filamentous virus 1 coat proteins display a helical fold spanning the filamentous archaeal viruses lineageQ27658313
The archaeo-eukaryotic primase of plasmid pRN1 requires a helix bundle domain for faithful primer synthesisQ27662047
C68 from the Sulfolobus islandicus plasmid-virus pSSVx is a novel member of the AbrB-like transcription factor familyQ27666459
Structural and Functional Characterization of an Archaeal Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR)-associated Complex for Antiviral Defense (CASCADE)Q27667493
Structure and Mechanism of the CMR Complex for CRISPR-Mediated Antiviral ImmunityQ27676627
The Structure of an Archaeal Viral Integrase Reveals an Evolutionarily Conserved Catalytic Core yet Supports a Mechanism of DNA Cleavage in transQ27679129
Structural and functional studies of Stf76 from the Sulfolobus islandicus plasmid-virus pSSVx: a novel peculiar member of the winged helix-turn-helix transcription factor familyQ27682683
A new proposed taxon for double-stranded DNA viruses, the order "Ligamenvirales"Q28258007
Small CRISPR RNAs guide antiviral defense in prokaryotesQ28290898
Genetic and physical mapping of DNA replication origins in Haloferax volcaniiQ28469214
Sequences and replication of genomes of the archaeal rudiviruses SIRV1 and SIRV2: relationships to the archaeal lipothrixvirus SIFV and some eukaryal virusesQ40587228
DNA ejection from an archaeal virus--a single-molecule approachQ40912128
Halobacterium halobium phage øH.Q41295528
SAV 1, a temperate u.v.-inducible DNA virus-like particle from the archaebacterium Sulfolobus acidocaldarius isolate B12.Q41580323
A dimeric Rep protein initiates replication of a linear archaeal virus genome: implications for the Rep mechanism and viral replicationQ41779967
Structure of the acidianus filamentous virus 3 and comparative genomics of related archaeal lipothrixvirusesQ41851859
Novel RepA-MCM proteins encoded in plasmids pTAU4, pORA1 and pTIK4 from Sulfolobus neozealandicusQ41886114
First insights into the entry process of hyperthermophilic archaeal viruses.Q41894122
Autonomous plasmid-like replication of a conjugative transposonQ41899135
Two CRISPR-Cas systems in Methanosarcina mazei strain Gö1 display common processing features despite belonging to different types I and III.Q41904442
Unification of the globally distributed spindle-shaped viruses of the ArchaeaQ41908853
Genetic determinants of PAM-dependent DNA targeting and pre-crRNA processing in Sulfolobus islandicus.Q41968713
Novel insights into gene regulation of the rudivirus SIRV2 infecting Sulfolobus cellsQ42027998
Repressor CopG prevents access of RNA polymerase to promoter and actively dissociates open complexes.Q42095432
Living side by side with a virus: characterization of two novel plasmids from Thermococcus prieurii, a host for the spindle-shaped virus TPV1.Q42119400
Genomic comparison of archaeal conjugative plasmids from SulfolobusQ42134029
Unique genome replication mechanism of the archaeal virus AFV1.Q42221545
Small multicopy, non-integrative shuttle vectors based on the plasmid pRN1 for Sulfolobus acidocaldarius and Sulfolobus solfataricus, model organisms of the (cren-)archaeaQ42234411
Inter-viral conflicts that exploit host CRISPR immune systems of SulfolobusQ42242892
Accelerated growth in the absence of DNA replication originsQ42258104
A novel single-tailed fusiform Sulfolobus virus STSV2 infecting model Sulfolobus speciesQ42259527
Transcriptional analysis of the genetic element pSSVx: differential and temporal regulation of gene expression reveals correlation between transcription and replicationQ42412374
A novel virus family, the Rudiviridae: Structure, virus-host interactions and genome variability of the sulfolobus viruses SIRV1 and SIRV2.Q42561943
Properties of an unusual DNA primase from an archaeal plasmidQ42591426
AFV1, a novel virus infecting hyperthermophilic archaea of the genus acidianusQ42612251
A novel Sulfolobus non-conjugative extrachromosomal genetic element capable of integration into the host genome and spreading in the presence of a fusellovirusQ42613402
The genetic element pSSVx of the extremely thermophilic crenarchaeon Sulfolobus is a hybrid between a plasmid and a virusQ42613854
Plasmid pHH1 of Halobacterium salinarium: characterization of the replicon region, the gas vesicle gene cluster and insertion elementsQ42616230
Analysis of the first genome of a hyperthermophilic marine virus-like particle, PAV1, isolated from Pyrococcus abyssiQ42617881
A novel lipothrixvirus, SIFV, of the extremely thermophilic crenarchaeon SulfolobusQ42618414
Complete sequence and molecular characterization of pNB101, a rolling-circle replicating plasmid from the haloalkaliphilic archaeon Natronobacterium sp. strain AS7091.Q42624140
Complete nucleotide sequence of the virus SSV1 of the archaebacterium Sulfolobus shibataeQ42624676
Mutational analysis of the archaeal tyrosine recombinase SSV1 integrase suggests a mechanism of DNA cleavage in transQ42626370
Evidence for the horizontal transfer of an integrase gene from a fusellovirus to a pRN-like plasmid within a single strain of Sulfolobus and the implications for plasmid survivalQ42643790
Comparative sequence analysis of plasmids pME2001 and pME2200 of methanothermobacter marburgensis strains Marburg and ZH3.Q42648157
Temperate membrane-containing halophilic archaeal virus SNJ1 has a circular dsDNA genome identical to that of plasmid pHH205.Q42658407
Molecular analysis of Methanobacterium phage psiM2.Q42685195
Genetic profile of pNOB8 from Sulfolobus: the first conjugative plasmid from an archaeonQ42686824
Two novel conjugative plasmids from a single strain of SulfolobusQ42689642
Transcription termination in the plasmid/virus hybrid pSSVx from Sulfolobus islandicusQ42928229
Virology: independent virus development outside a hostQ43018053
Characterization of the small endogenous plasmid of Halobacterium strain SB3 and its use in transformation of H. halobiumQ43018327
Structural and genomic properties of the hyperthermophilic archaeal virus ATV with an extracellular stage of the reproductive cycleQ43020302
Characterisation of the novel restriction endonuclease SuiI from Sulfolobus islandicusQ43020884
Characterization of the Sulfolobus host-SSV2 virus interactionQ43020888
The SF1 helicase encoded by the archaeal plasmid pTN2 of Thermococcus nautili.Q43021794
HF1 and HF2: novel bacteriophages of halophilic archaeaQ43023205
Viruses in acidic geothermal environments of the Kamchatka Peninsula.Q43024861
Occurrence of virus-like particles in the Dead Sea.Q43025567
Genetic elements in the extremely thermophilic archaeon SulfolobusQ43025837
Conjugation in archaea: frequent occurrence of conjugative plasmids in SulfolobusQ43025976
Unmarked gene deletion and host-vector system for the hyperthermophilic crenarchaeon Sulfolobus islandicusQ43026895
Four newly isolated fuselloviruses from extreme geothermal environments reveal unusual morphologies and a possible interviral recombination mechanismQ43027263
The archaeal halophilic virus-encoded Dam-like methyltransferase M. phiCh1-I methylates adenine residues and complements dam mutants in the low salt environment of Escherichia coli.Q43027269
SNDV, a novel virus of the extremely thermophilic and acidophilic archaeon SulfolobusQ43027728
The genome of the archaeal virus SIRV1 has features in common with genomes of eukaryal virusesQ43028423
Genome of the Acidianus bottle-shaped virus and insights into the replication and packaging mechanisms.Q34616325
Common principles in viral entryQ34762731
Archaeal integrative genetic elements and their impact on genome evolutionQ34861286
A unique cell division machinery in the Archaea.Q34873599
An ssDNA virus infecting archaea: a new lineage of viruses with a membrane envelope.Q34965242
Hyperthermophilic DNA methyltransferase M.PabI from the archaeon Pyrococcus abyssiQ34973904
Viruses manipulate the marine environmentQ34981157
A hidden reservoir of integrative elements is the major source of recently acquired foreign genes and ORFans in archaeal and bacterial genomesQ34987181
Sulfolobus turreted icosahedral virus c92 protein responsible for the formation of pyramid-like cellular lysis structuresQ35077431
Functional characterization of the origin of replication of pRN1 from Sulfolobus islandicus REN1H1.Q35078452
The Lrp family of transcriptional regulatorsQ35098855
Molecular characterization of the minimal replicon and the unidirectional theta replication of pSCM201 in extremely halophilic archaeaQ35220626
Molecular interaction between bacteriophage and the gram-negative cell envelopeQ35449416
Sequence of plasmid pGT5 from the archaeon Pyrococcus abyssi: evidence for rolling-circle replication in a hyperthermophileQ35608034
Characterization of pURB500 from the archaeon Methanococcus maripaludis and construction of a shuttle vectorQ35622764
Archaeal integrases and mechanisms of gene captureQ35717383
Complete nucleotide sequence of plasmid pME2001 of Methanobacterium thermoautotrophicum (Marburg).Q35827601
Structure and cell biology of archaeal virus STIV.Q35878304
Identification of novel positive-strand RNA viruses by metagenomic analysis of archaea-dominated Yellowstone hot springsQ35943573
A genetic system for Archaea of the genus Methanosarcina: liposome-mediated transformation and construction of shuttle vectorsQ36052593
Plasmid rolling-circle replication: highlights of two decades of researchQ36057469
Minimal replication origin of the 200-kilobase Halobacterium plasmid pNRC100.Q36103526
A synthetic arabinose-inducible promoter confers high levels of recombinant protein expression in hyperthermophilic archaeon Sulfolobus islandicus.Q36120266
Construction and use of halobacterial shuttle vectors and further studies on Haloferax DNA gyraseQ36147119
A plasmid vector with a selectable marker for halophilic archaebacteriaQ36157975
The biology of restriction and anti-restrictionQ36175695
An archaeal immune system can detect multiple protospacer adjacent motifs (PAMs) to target invader DNA.Q36286108
What does structure tell us about virus evolution?Q36306852
Plasmids and viruses of the thermoacidophilic crenarchaeote SulfolobusQ36362454
Bacteriophage replication modulesQ36440552
Hot crenarchaeal viruses reveal deep evolutionary connectionsQ36498037
Characterization of CRISPR RNA biogenesis and Cas6 cleavage-mediated inhibition of a provirus in the haloarchaeon Haloferax mediterraneiQ36581178
Transcriptome analysis of infection of the archaeon Sulfolobus solfataricus with Sulfolobus turreted icosahedral virus.Q36594126
The contribution of RNAs and retroposition to evolutionary noveltiesQ34215060
An Archaeal Chromosomal Autonomously Replicating Sequence Element from an Extreme Halophile,Halobacteriumsp. Strain NRC-1Q34267329
Mobile elements and mammalian genome evolution.Q34279041
Prokaryote viruses studied by electron microscopyQ34285434
Selective and hyperactive uptake of foreign DNA by adaptive immune systems of an archaeon via two distinct mechanisms.Q34290429
Characterization of plasmid pRT1 from Pyrococcus sp. strain JT1.Q34309708
The structure of a thermophilic archaeal virus shows a double-stranded DNA viral capsid type that spans all domains of lifeQ34318354
A novel interference mechanism by a type IIIB CRISPR-Cmr module in Sulfolobus.Q34322670
Morphology and genome organization of the virus PSV of the hyperthermophilic archaeal genera Pyrobaculum and Thermoproteus: a novel virus family, the Globuloviridae.Q34326628
Characterization of pHV2 from Halobacterium volcanii and its use in demonstrating transformation of an archaebacteriumQ34372391
A highly divergent archaeo-eukaryotic primase from the Thermococcus nautilus plasmid, pTN2.Q34399126
Diversity and evolution of multiple orc/cdc6-adjacent replication origins in haloarchaeaQ34414784
A novel rudivirus, ARV1, of the hyperthermophilic archaeal genus AcidianusQ34415358
Constituents of SH1, a novel lipid-containing virus infecting the halophilic euryarchaeon Haloarcula hispanicaQ34430958
Integration sites for genetic elements in prokaryotic tRNA and tmRNA genes: sublocation preference of integrase subfamiliesQ34528191
A restriction endonuclease SuaI from the thermoacidophilic archaebacterium Sulfolobus acidocaldariusQ34564737
A novel archaeal regulatory protein, Sta1, activates transcription from viral promotersQ34566255
Molecular analysis of pDL10 from Acidianus ambivalens reveals a family of related plasmids from extremely thermophilic and acidophilic archaea.Q34607392
The Sulfolobus rod-shaped virus 2 encodes a prominent structural component of the unique virion release system in Archaea.Q43028837
Metagenomic analyses of novel viruses and plasmids from a cultured environmental sample of hyperthermophilic neutrophilesQ43028982
Cleavage properties of an archaeal site-specific recombinase, the SSV1 integraseQ43029988
Global network of specific virus-host interactions in hypersaline environments.Q43033002
Relationships between fuselloviruses infecting the extremely thermophilic archaeon Sulfolobus: SSV1 and SSV2.Q43033575
An archaeal CRISPR type III-B system exhibiting distinctive RNA targeting features and mediating dual RNA and DNA interference.Q43097718
An upstream activation element exerting differential transcriptional activation on an archaeal promoterQ43264415
Evolution of the family of pRN plasmids and their integrase-mediated insertion into the chromosome of the crenarchaeon Sulfolobus solfataricusQ43660592
AAA ATPase p529 of Acidianus two-tailed virus ATV and host receptor recognitionQ43934570
The legacy of Carl Woese and Wolfram Zillig: from phylogeny to landmark discoveriesQ44416267
pAMT11, a novel plasmid isolated from a Thermococcus sp. strain closely related to the virus-like integrated element TKV1 of the Thermococcus kodakaraensis genomeQ44707157
The SSV1 viral integrase is not essentialQ45011865
Structural and functional characterization of the C-terminal catalytic domain of SSV1 integraseQ45144053
Virus-host interactions in environments with a wide range of ionic strengthsQ45350758
TPV1, the first virus isolated from the hyperthermophilic genus ThermococcusQ45361210
Elucidating the transcription cycle of the UV-inducible hyperthermophilic archaeal virus SSV1 by DNA microarraysQ45404571
His1 and His2 are distantly related, spindle-shaped haloviruses belonging to the novel virus group, SalterprovirusQ45418978
Transcription and translation in Archaea: a mosaic of eukaryal and bacterial featuresQ47797051
Genetic analysis of a novel plasmid pZMX101 from Halorubrum saccharovorum: determination of the minimal replicon and comparison with the related haloarchaeal plasmid pSCM201.Q48080776
Independent replication of the plasmids pRN1 and pRN2 in the archaeon Sulfolobus islandicus.Q52963763
SH1: A novel, spherical halovirus isolated from an Australian hypersaline lake.Q53861264
SSV1-encoded site-specific recombination system in Sulfolobus shibatae.Q54660904
The phylogeny of prokaryotesQ58425529
Halobacterium strain 5 contains a plasmid which is correlated with the presence of gas vacuolesQ59081312
Gene capture in archaeal chromosomesQ59098618
Plasmid-related anaerobic autotrophy of the novel archaebacterium Sulfolobus ambivalensQ59098627
Characterization of Natronobacterium magadii phage ΦCh1, a unique archaeal phage containing DNA and RNAQ60503883
A plasmid in the archaebacterium Methanobacterium thermoautotrophicumQ70171307
Induction and preliminary characterization of a novel halophage SNJ1 from lysogenic Natrinema sp. F5Q79915214
Molecular biology of the pRN1 plasmid from Sulfolobus islandicusQ83185628
Transcriptomic analysis of the SSV2 infection of Sulfolobus solfataricus with and without the integrative plasmid pSSViQ86581135
Insights into a viral lytic pathway from an archaeal virus-host system.Q36607351
Precise determination, cross-recognition, and functional analysis of the double-strand origins of the rolling-circle replication plasmids in haloarchaeaQ36845090
Phage community dynamics in hot springsQ36930177
Functional interplay between a virus and the ESCRT machinery in archaeaQ36967753
Massive activation of archaeal defense genes during viral infectionQ37036789
Programmable plasmid interference by the CRISPR-Cas system in Thermococcus kodakarensisQ37079815
Metabolic, phylogenetic, and ecological diversity of the methanogenic archaeaQ37124153
The particle SSV1 from the extremely thermophilic archaeon Sulfolobus is a virus: demonstration of infectivity and of transfection with viral DNA.Q37158180
Genomics and functional genomics with haloarchaea.Q37169097
Particle assembly and ultrastructural features associated with replication of the lytic archaeal virus sulfolobus turreted icosahedral virusQ37204652
A unique virus release mechanism in the ArchaeaQ37256984
Protein-priming of DNA replicationQ37285250
Genetic analyses in the hyperthermophilic archaeon Sulfolobus islandicusQ37368254
Genetics, biochemistry and structure of the archaeal virus STIV.Q37368261
The Mcm complex: unwinding the mechanism of a replicative helicase.Q37451513
CRISPR-based adaptive and heritable immunity in prokaryotesQ37568446
Adaptation of the Haloarcula hispanica CRISPR-Cas system to a purified virus strictly requires a priming processQ37606958
Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow.Q37770056
Plasmids, viruses and virus-like membrane vesicles from Thermococcales.Q37832250
Exceptional virion release mechanism: one more surprise from archaeal viruses.Q37870565
The archeovirusesQ37875200
Prokaryotic ParA-ParB-parS system links bacterial chromosome segregation with the cell cycleQ37933586
Archaeal CRISPR-based immune systems: exchangeable functional modulesQ37938333
The mysterious RAMP proteins and their roles in small RNA-based immunityQ37983037
Multiple activities of RNA-binding proteins S1 and Hfq.Q37988657
Postcards from the edge: structural genomics of archaeal virusesQ37993936
Double-stranded DNA viruses: 20 families and only five different architectural principles for virion assemblyQ37996178
Archaeal chromatin proteinsQ38014377
Archaeal viruses--novel, diverse and enigmaticQ38014381
Lytic viruses infecting organisms from the three domains of lifeQ38077246
Genomics and biology of Rudiviruses, a model for the study of virus-host interactions in ArchaeaQ38077266
Diverse functions of restriction-modification systems in addition to cellular defenseQ38087543
The major role of viruses in cellular evolution: facts and hypothesesQ38122830
The wonderful world of archaeal virusesQ38136268
Molecular biology of fuselloviruses and their satellites.Q38190447
A backward view from 16S rRNA to archaea to the universal tree of life to progenotes: reminiscences of Carl WoeseQ38194381
Holliday junction resolving enzymes of archaeal viruses SIRV1 and SIRV2Q29037282
Prokaryotic toxin-antitoxin stress response lociQ29615335
RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complexQ29615785
Evolution and classification of the CRISPR-Cas systemsQ29616645
Marine viruses--major players in the global ecosystemQ29616822
Closely related archaeal Haloarcula hispanica icosahedral viruses HHIV-2 and SH1 have nonhomologous genes encoding host recognition functionsQ30155369
Stygiolobus rod-shaped virus and the interplay of crenarchaeal rudiviruses with the CRISPR antiviral system.Q30371572
Lipids of archaeal viruses.Q30462689
Methanococcus vulcanius sp. nov., a novel hyperthermophilic methanogen isolated from East Pacific Rise, and identification of Methanococcus sp. DSM 4213T as Methanococcus fervens sp. nov.Q30577013
Sequence analysis of an Archaeal virus isolated from a hypersaline lake in Inner Mongolia, ChinaQ30837334
Archaebacterial virus SSV1 encodes a putative DnaA-like proteinQ31122055
Genome information management and integrated data analysis with HaloLex.Q31161033
Snapshot of a large dynamic replicon in a halophilic archaeon: megaplasmid or minichromosome?Q31958293
Structure and activity of the RNA-targeting Type III-B CRISPR-Cas complex of Thermus thermophilusQ33131259
Viruses of the Archaea: a unifying viewQ33260443
The rolling-circle plasmid pTN1 from the hyperthermophilic archaeon Thermococcus nautilusQ33296897
Two novel families of plasmids from hyperthermophilic archaea encoding new families of replication proteinsQ33559437
A superfamily 3 DNA helicase encoded by plasmid pSSVi from the hyperthermophilic archaeon Sulfolobus solfataricus unwinds DNA as a higher-order oligomer and interacts with host primaseQ33725394
New, closely related haloarchaeal viral elements with different nucleic Acid typesQ33725685
In vivo assembly of an archaeal virus studied with whole-cell electron cryotomographyQ33764042
Transformation of Halobacterium halobium: development of vectors and investigation of gas vesicle synthesisQ33772203
His1, an archaeal virus of the Fuselloviridae family that infects Haloarcula hispanicaQ33785514
Structure and genome organization of AFV2, a novel archaeal lipothrixvirus with unusual terminal and core structuresQ33788534
Filamentous bacteriophage: biology, phage display and nanotechnology applicationsQ33876273
ATPase switches controlling DNA replication initiation.Q33912857
Viruses from extreme thermal environmentsQ33949374
pING family of conjugative plasmids from the extremely thermophilic archaeon Sulfolobus islandicus: insights into recombination and conjugation in CrenarchaeotaQ33995069
Transcription in archaea: similarity to that in eucaryaQ34058138
Diversity of viruses of the hyperthermophilic archaeal genus Aeropyrum, and isolation of the Aeropyrum pernix bacilliform virus 1, APBV1, the first representative of the family ClavaviridaeQ34112894
Dynamic properties of the Sulfolobus CRISPR/Cas and CRISPR/Cmr systems when challenged with vector-borne viral and plasmid genes and protospacersQ34155448
In vivo activity of CRISPR-mediated virus defence in a hyperthermophilic archaeonQ34169232
Do viruses form lineages across different domains of life?Q34204656
Archaeal viruses and bacteriophages: comparisons and contrasts.Q38197454
Topoisomerase activity of the hyperthermophilic replication initiator protein Rep75.Q38311105
The active site of the rolling circle replication protein Rep75 is involved in site-specific nuclease, ligase and nucleotidyl transferase activitiesQ38322584
Modular organization of related Archaeal plasmids encoding different restriction-modification systems in Methanobacterium thermoformicicumQ38323445
The structure of plasmid-encoded transcriptional repressor CopG unliganded and bound to its operatorQ38330387
A rolling circle replication initiator protein with a nucleotidyl-transferase activity encoded by the plasmid pGT5 from the hyperthermophilic archaeon Pyrococcus abyssiQ38338098
CRISPR adaptive immune systems of ArchaeaQ38597506
Provirus induction in hyperthermophilic archaea: characterization of Aeropyrum pernix spindle-shaped virus 1 and Aeropyrum pernix ovoid virus 1.Q38631160
Thermostable and site-specific DNA binding of the gene product ORF56 from the Sulfolobus islandicus plasmid pRN1, a putative archael plasmid copy control proteinQ38658498
In vitro assembly and activity of an archaeal CRISPR-Cas type I-A Cascade interference complex.Q39094838
The protein ORF80 from the acidophilic and thermophilic archaeon Sulfolobus islandicus binds highly site-specifically to double-stranded DNA and represents a novel type of basic leucine zipper proteinQ39516125
Replication and control of circular bacterial plasmids.Q39523346
VapC6, a ribonucleolytic toxin regulates thermophilicity in the crenarchaeote Sulfolobus solfataricusQ39534053
Characterization of an extremely thermostable restriction enzyme, PspGI, from a Pyrococcus strain and cloning of the PspGI restriction-modification system in Escherichia coli.Q39562182
A novel type of replicative enzyme harbouring ATPase, primase and DNA polymerase activityQ39756128
PAV1, the first virus-like particle isolated from a hyperthermophilic euryarchaeote, "Pyrococcus abyssi".Q39775227
Characterization of the archaeal, plasmid-encoded type II restriction-modification system MthTI from Methanobacterium thermoformicicum THF: homology to the bacterial NgoPII system from Neisseria gonorrhoeaeQ39936371
Characterization of plasmids in halobacteriaQ39974808
Evidence for two restriction-modification systems in Halobacterium cutirubrumQ39981114
Evidence for a plasmid in a methanogenic bacteriumQ39988567
Virus receptors: binding, adhesion strengthening, and changes in viral structure.Q40037677
Transcription of the rod-shaped viruses SIRV1 and SIRV2 of the hyperthermophilic archaeon sulfolobusQ40271445
Transfer RNA genes frequently serve as integration sites for prokaryotic genetic elements.Q40447816
Nucleotide sequence of ISH11, a new Halobacterium halobium insertion element isolated from the plasmid pGRB1.Q40526286
T(lys), a newly identified Sulfolobus spindle-shaped virus 1 transcript expressed in the lysogenic state, encodes a DNA-binding protein interacting at the promoters of the early genesQ40527927
Identification of the CTAG-recognizing restriction-modification systems MthZI and MthFI from Methanobacterium thermoformicicum and characterization of the plasmid-encoded mthZIM geneQ40534533
Analysis of transcription in the archaebacterium Sulfolobus indicates that archaebacterial promoters are homologous to eukaryotic pol II promotersQ40536345
DNA sequence of a small plasmid from Halobacterium strain GN101.Q40540245
The complete nucleotide sequence of the arcaebacterial plasmid pHSB from Halobacterium, strain SB3.Q40545850
A restriction enzyme Tha I from the thermophilic mycoplasma Thermoplasma acidophilumQ40573305
Haloarchaeal viruses: how diverse are they?Q40582388
P433issue1
P304page(s)117-152
P577publication date2015-03-01
P1433published inMicrobiology and Molecular Biology ReviewsQ6839270
P1476titleArchaeal extrachromosomal genetic elements
P478volume79

Reverse relations

cites work (P2860)
Q93047953A New View of the T-Loop Junction: Implications for Self-Primed Telomere Extension, Expansion of Disease-Related Nucleotide Repeat Blocks, and Telomere Evolution
Q40235591A Novel Type of Polyhedral Viruses Infecting Hyperthermophilic Archaea
Q45323697A novel Sulfolobus virus with an exceptional capsid architecture
Q40076026A plasmid from an Antarctic haloarchaeon uses specialized membrane vesicles to disseminate and infect plasmid-free cells
Q40420402A type III-B CRISPR-Cas effector complex mediating massive target DNA destruction
Q36083521An engineered bacterium auxotrophic for an unnatural amino acid: a novel biological containment system
Q35334222CRISPR-Cas Adaptive Immune Systems of the Sulfolobales: Unravelling Their Complexity and Diversity
Q90209240Co-evolution in the Jungle: From Leafcutter Ant Colonies to Chromosomal Ends
Q37700092Construction of Expression Shuttle Vectors for the Haloarchaeon Natrinema sp. J7 Based on Its Chromosomal Origins of Replication.
Q36914654DNA motifs determining the accuracy of repeat duplication during CRISPR adaptation in Haloarcula hispanica
Q40118746DNA-Interacting Characteristics of the Archaeal Rudiviral Protein SIRV2_Gp1.
Q41862584Diverse CRISPR-Cas responses and dramatic cellular DNA changes and cell death in pKEF9-conjugated Sulfolobus species
Q26741936Driving Apart and Segregating Genomes in Archaea
Q52580362Evolution of Genome Architecture in Archaea: Spontaneous Generation of a New Chromosome in Haloferax volcanii.
Q39157444Genetic technologies for extremely thermophilic microorganisms of Sulfolobus, the only genetically tractable genus of crenarchaea
Q28818327Genome Sequencing of Sulfolobus sp. A20 from Costa Rica and Comparative Analyses of the Putative Pathways of Carbon, Nitrogen, and Sulfur Metabolism in Various Sulfolobus Strains
Q64884955Integrated mobile genetic elements in Thaumarchaeota.
Q39305543Mechanisms of gene flow in archaea
Q40054958Methanosarcina Spherical Virus, a Novel Archaeal Lytic Virus Targeting Methanosarcina Strains.
Q93163685New virus isolates from Italian hydrothermal environments underscore the biogeographic pattern in archaeal virus communities
Q36208186Site-Specific Recombination by SSV2 Integrase: Substrate Requirement and Domain Functions
Q59353850Stable maintenance of the rudivirus SIRV3 in a carrier state in Sulfolobus islandicus despite activation of the CRISPR-Cas immune response by a second virus SMV1
Q90019471The global distribution and evolutionary history of the pT26-2 archaeal plasmid family
Q33636101The spacer size of I-B CRISPR is modulated by the terminal sequence of the protospacer
Q52431398Tolerance of Sulfolobus SMV1 virus to the immunity of I-A and III-B CRISPR-Cas systems in Sulfolobus islandicus.
Q42148320Unravelling the Role of the F55 Regulator in the Transition from Lysogeny to UV Induction of Sulfolobus Spindle-Shaped Virus 1.
Q47365497Viruses of archaea: Structural, functional, environmental and evolutionary genomics.

Search more.