Hyperthermophilic DNA methyltransferase M.PabI from the archaeon Pyrococcus abyssi

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Hyperthermophilic DNA methyltransferase M.PabI from the archaeon Pyrococcus abyssi is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/AEM.00433-06
P932PMC publication ID1538712
P698PubMed publication ID16885288

P2093author name stringIchizo Kobayashi
Naofumi Handa
Miki Watanabe
Harumi Yuzawa
P2860cites workComplete Genome Sequence of an Aerobic Hyper-thermophilic Crenarchaeon, Aeropyrum pernix K1Q22066070
Complete Sequence and Gene Organization of the Genome of a Hyper-thermophilic Archaebacterium, Pyrococcus horikoshii OT3Q22066073
Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pyloriQ22122443
Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolutionQ24555229
Three-dimensional structure of the adenine-specific DNA methyltransferase M.Taq I in complex with the cofactor S-adenosylmethionineQ24562671
Predicting DNA duplex stability from the base sequenceQ24629471
Purification and characterisation of a novel DNA methyltransferase, M.AhdIQ24671538
A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genesQ24684053
REBASE--restriction enzymes and DNA methyltransferasesQ24793693
Discovery of a novel restriction endonuclease by genome comparison and application of a wheat-germ-based cell-free translation assay: PabI (5'-GTA/C) from the hyperthermophilic archaeon Pyrococcus abyssiQ24813907
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye bindingQ25938984
Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectorsQ26778475
Structures along the Catalytic Pathway of PrmC/HemK, an N5-Glutamine AdoMet-Dependent MethyltransferaseQ27641215
HhaI methyltransferase flips its target base out of the DNA helixQ27731553
Differential binding of S-adenosylmethionine S-adenosylhomocysteine and Sinefungin to the adenine-specific DNA methyltransferase M.TaqIQ27734381
Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genesQ27860623
Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoterQ27860697
Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostabilityQ28203641
Analysis of gene control signals by DNA fusion and cloning in Escherichia coliQ29615300
Vectors for selective expression of cloned DNAs by T7 RNA polymeraseQ29620230
Cellular responses to postsegregational killing by restriction-modification genesQ33789255
Shaping the genome--restriction-modification systems as mobile genetic elements.Q33801564
Crystal structure of DNA sequence specificity subunit of a type I restriction-modification enzyme and its functional implicationsQ33858629
AdoMet-dependent methylation, DNA methyltransferases and base flippingQ33941847
Stability of EcoRI restriction-modification enzymes in vivo differentiates the EcoRI restriction-modification system from other postsegregational cell killing systems.Q34077198
An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssiQ34182074
Selfish behavior of restriction-modification systemsQ34317932
Horizontal gene transfer contributes to the wide distribution and evolution of type II restriction-modification systemsQ34407489
Understanding the evolution of restriction-modification systems: clues from sequence and structure comparisons.Q34627894
Structure, function, and mechanism of HhaI DNA methyltransferasesQ34760487
REBASE: restriction enzymes and methyltransferasesQ35158752
Purification and characterization of two new modification methylases; MClal from Caryophanon latum L and MTaqI from Thermus aquaticus YTIQ35747622
The mechanism of DNA cytosine-5 methylation. Kinetic and mutational dissection of Hhai methyltransferaseQ38302392
Kinetic mechanism of the EcoRI DNA methyltransferaseQ38336068
Phage T4 DNA [N6-adenine] methyltransferase: kinetic studies using oligonucleotides containing native or modified recognition sitesQ38336588
Characterization of an extremely thermostable restriction enzyme, PspGI, from a Pyrococcus strain and cloning of the PspGI restriction-modification system in Escherichia coli.Q39562182
PI-PfuI and PI-PfuII, intein-coded homing endonucleases from Pyrococcus furiosus. I. Purification and identification of the homing-type endonuclease activitiesQ39729371
The cleavage site of the RsaI isoschizomer, CviII, is G decreases TAC.Q40392195
EcoRI methylase. Physical and catalytic properties of the homogeneous enzymeQ40810553
Structural features responsible for kinetic thermal stability of a carboxypeptidase from the archaebacterium Sulfolobus solfataricus.Q41817777
Isolation and characterization of site-specific DNA-methyltransferases from Bacillus coagulans K.Q43015274
Purification and characterization of D-glyceraldehyde-3-phosphate dehydrogenase from the thermophilic archaebacterium Methanothermus fervidusQ43019155
Protection of DNA by salts against thermodegradation at temperatures typical for hyperthermophilesQ43025458
Kinetic and catalytic properties of dimeric KpnI DNA methyltransferaseQ44265593
Heat effect on the structure and activity of the recombinant glutamate dehydrogenase from a hyperthermophilic archaeon Pyrococcus horikoshiiQ44318688
DNA (cytosine-N4-)- and -(adenine-N6-)-methyltransferases have different kinetic mechanisms but the same reaction route. A comparison of M.BamHI and T4 Dam.Q44323352
Characterization of the LlaCI methyltransferase from Lactococcus lactis subsp. cremoris W15 provides new insights into the biology of type II restriction–modification systemsQ44643993
Protein splicing of a Pyrococcus abyssi intein with a C-terminal glutamineQ44801445
Ion effects on ligand-nucleic acid interactionsQ46833485
The RadA protein from a hyperthermophilic archaeon Pyrobaculum islandicum is a DNA-dependent ATPase that exhibits two disparate catalytic modes, with a transition temperature at 75 degrees C.Q47885347
Structure-guided analysis reveals nine sequence motifs conserved among DNA amino-methyltransferases, and suggests a catalytic mechanism for these enzymesQ48069333
Diversity of restriction-modification gene homologues in Helicobacter pylori.Q52927779
Multiplication of a restriction-modification gene complex.Q53935059
Purification and characterization of carbamoyl-phosphate synthetase from the deep-sea hyperthermophilic archaebacterium Pyrococcus abyssiQ57088301
Insertion with long target duplication: a mechanism for gene mobility suggested from comparison of two related bacterial genomesQ73408431
Comparison between Pyrococcus horikoshii and Pyrococcus abyssi genome sequences reveals linkage of restriction-modification genes with large genome polymorphismsQ73408438
Experimental genome evolution: large-scale genome rearrangements associated with resistance to replacement of a chromosomal restriction-modification gene complexQ74008676
The stability and hydrolysis of S-adenosylmethionine; isolation of S-ribosylmethionineQ74785349
Microdetermination of purines and pyrimidines in biological materialsQ75721895
Functional roles of the conserved aromatic amino acid residues at position 108 (motif IV) and position 196 (motif VIII) in base flipping and catalysis by the N6-adenine DNA methyltransferase from Thermus aquaticusQ77945248
Crystal structure of a putative type I restriction-modification S subunit from Mycoplasma genitaliumQ80415317
P433issue8
P407language of work or nameEnglishQ1860
P921main subjectPyrococcus abyssiQ16988919
P304page(s)5367-5375
P577publication date2006-08-01
P1433published inApplied and Environmental MicrobiologyQ4781593
P1476titleHyperthermophilic DNA methyltransferase M.PabI from the archaeon Pyrococcus abyssi
P478volume72

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cites work (P2860)
Q64056384A new type of DNA phosphorothioation-based antiviral system in archaea
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Q27643963Novel protein fold discovered in the PabI family of restriction enzymes
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Q92033437The Phylogenetic Relationships of a 4mC/6mA DNA Methyltransferase in Prokaryotes
Q35813422Transmission of the PabI family of restriction DNA glycosylase genes: mobility and long-term inheritance
Q33843093Type II restriction endonucleases--a historical perspective and more

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