Diverse CRISPR-Cas responses and dramatic cellular DNA changes and cell death in pKEF9-conjugated Sulfolobus species

scientific article published on 20 April 2016

Diverse CRISPR-Cas responses and dramatic cellular DNA changes and cell death in pKEF9-conjugated Sulfolobus species is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/NAR/GKW286
P932PMC publication ID4872121
P698PubMed publication ID27098036

P50authorQunxin SheQ30439305
P2093author name stringRoger A Garrett
Guannan Liu
P2860cites workGenome Analyses of Icelandic Strains of Sulfolobus islandicus, Model Organisms for Genetic and Virus-Host Interaction StudiesQ22065480
The complete genome of the crenarchaeon Sulfolobus solfataricus P2Q22066249
Genomic analysis of Acidianus hospitalis W1 a host for studying crenarchaeal virus and plasmid life cyclesQ24609337
A rapid alkaline extraction procedure for screening recombinant plasmid DNAQ24614998
A multicopy plasmid of the extremely thermophilic archaeon Sulfolobus effects its transfer to recipients by matingQ24671302
Artemis: sequence visualization and annotationQ27861024
CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNAQ29615786
Fast algorithms for large-scale genome alignment and comparisonQ29618357
Identification of novel non-coding RNAs as potential antisense regulators in the archaeon Sulfolobus solfataricusQ31142371
Mutations and rearrangements in the genome of Sulfolobus solfataricus P2.Q33245451
pING family of conjugative plasmids from the extremely thermophilic archaeon Sulfolobus islandicus: insights into recombination and conjugation in CrenarchaeotaQ33995069
A putative viral defence mechanism in archaeal cellsQ33998177
Dynamic properties of the Sulfolobus CRISPR/Cas and CRISPR/Cmr systems when challenged with vector-borne viral and plasmid genes and protospacersQ34155448
Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity systemQ34287113
Selective and hyperactive uptake of foreign DNA by adaptive immune systems of an archaeon via two distinct mechanisms.Q34290429
A novel interference mechanism by a type IIIB CRISPR-Cmr module in Sulfolobus.Q34322670
Mobile elements in archaeal genomesQ34508375
Distribution of CRISPR spacer matches in viruses and plasmids of crenarchaeal acidothermophiles and implications for their inhibitory mechanism.Q34921482
CRISPR families of the crenarchaeal genus Sulfolobus: bidirectional transcription and dynamic propertiesQ34951113
Transcriptional regulator-mediated activation of adaptation genes triggers CRISPR de novo spacer acquisitionQ35098083
CRISPR-Cas Adaptive Immune Systems of the Sulfolobales: Unravelling Their Complexity and DiversityQ35334222
Archaeal extrachromosomal genetic elementsQ35482661
Virus-induced dormancy in the archaeon Sulfolobus islandicusQ35677508
CRISPR interference and priming varies with individual spacer sequencesQ36370849
Foreign DNA acquisition by the I-F CRISPR-Cas system requires all components of the interference machineryQ36370853
Responses of hyperthermophilic crenarchaea to UV irradiationQ36465637
Cell cycle characteristics of thermophilic archaeaQ36876824
SMV1 virus-induced CRISPR spacer acquisition from the conjugative plasmid pMGB1 in Sulfolobus solfataricus P2.Q37341024
Adaptation of the Haloarcula hispanica CRISPR-Cas system to a purified virus strictly requires a priming processQ37606958
CRISPR adaptive immune systems of ArchaeaQ38597506
Transcriptome changes in STSV2-infected Sulfolobus islandicus REY15A undergoing continuous CRISPR spacer acquisition.Q40378937
CRISPR-Cas systems preferentially target the leading regions of MOBF conjugative plasmids.Q41958555
Genetic determinants of PAM-dependent DNA targeting and pre-crRNA processing in Sulfolobus islandicus.Q41968713
Priming in the Type I-F CRISPR-Cas system triggers strand-independent spacer acquisition, bi-directionally from the primed protospacer.Q42092486
Genomic comparison of archaeal conjugative plasmids from SulfolobusQ42134029
CRISPR adaptation biases explain preference for acquisition of foreign DNAQ42148640
Inter-viral conflicts that exploit host CRISPR immune systems of SulfolobusQ42242892
Genetic profile of pNOB8 from Sulfolobus: the first conjugative plasmid from an archaeonQ42686824
Two novel conjugative plasmids from a single strain of SulfolobusQ42689642
Genetic elements in the extremely thermophilic archaeon SulfolobusQ43025837
Conjugation in archaea: frequent occurrence of conjugative plasmids in SulfolobusQ43025976
Unmarked gene deletion and host-vector system for the hyperthermophilic crenarchaeon Sulfolobus islandicusQ43026895
Relationships between fuselloviruses infecting the extremely thermophilic archaeon Sulfolobus: SSV1 and SSV2.Q43033575
An archaeal CRISPR type III-B system exhibiting distinctive RNA targeting features and mediating dual RNA and DNA interference.Q43097718
CRISPR/Cas and Cmr modules, mobility and evolution of adaptive immune systems.Q52422353
P433issue9
P921main subjectCRISPRQ412563
P304page(s)4233-4242
P577publication date2016-04-20
P1433published inNucleic Acids ResearchQ135122
P1476titleDiverse CRISPR-Cas responses and dramatic cellular DNA changes and cell death in pKEF9-conjugated Sulfolobus species
P478volume44

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cites work (P2860)
Q57014790Comparative genetic and genomic analysis of the novel fusellovirus Sulfolobus spindle-shaped virus 10
Q40349829Extreme Mutation Tolerance: Nearly Half of the Archaeal Fusellovirus Sulfolobus Spindle-Shaped Virus 1 Genes Are Not Required for Virus Function, Including the Minor Capsid Protein Gene vp3.
Q91711528Game-Theoretical Modeling of Interviral Conflicts Mediated by Mini-CRISPR Arrays
Q39157444Genetic technologies for extremely thermophilic microorganisms of Sulfolobus, the only genetically tractable genus of crenarchaea
Q40277695High tolerance to self-targeting of the genome by the endogenous CRISPR-Cas system in an archaeon.
Q42086166Major and minor crRNA annealing sites facilitate low stringency DNA protospacer binding prior to Type I-A CRISPR-Cas interference in Sulfolobus
Q39305543Mechanisms of gene flow in archaea
Q36239956Role of Recombinant DNA Technology to Improve Life
Q47894799Role of free DNA ends and protospacer adjacent motifs for CRISPR DNA uptake in Pyrococcus furiosus
Q52323301The nuts and bolts of the Haloferax CRISPR-Cas system I-B.
Q52431398Tolerance of Sulfolobus SMV1 virus to the immunity of I-A and III-B CRISPR-Cas systems in Sulfolobus islandicus.

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