The legacy of Carl Woese and Wolfram Zillig: from phylogeny to landmark discoveries

scientific article published in October 2013

The legacy of Carl Woese and Wolfram Zillig: from phylogeny to landmark discoveries is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1002433251
P356DOI10.1038/NRMICRO3124
P698PubMed publication ID24037452

P50authorChrista SchleperQ21256844
Sonja-Verena AlbersQ21264709
P2093author name stringPatrick Forterre
David Prangishvili
P2860cites workThe archaellum: an old motility structure with a new nameQ48636424
Pyrococcus furiosus sp. nov. represents a novel genus of marine heterotrophic archaebacteria growing optimally at 100�CQ56443239
A marine microbial consortium apparently mediating anaerobic oxidation of methaneQ56674976
Structural evolution of multisubunit RNA polymerasesQ56897839
The origin of eukaryotes and their relationship with the Archaea: are we at a phylogenomic impasse?Q58835264
Life at extremely low pHQ59066237
Positively supercoiled DNA in a virus-like particle of an archaebacteriumQ59087292
Reverse gyrase—a topoisomerase which introduces positive superhelical turns into DNAQ59088351
Bacterial Mode of Replication with Eukaryotic-Like Machinery in a Hyperthermophilic ArchaeonQ60134797
DNA-dependent RNA polymerase from Halobacterium halobiumQ67416168
Studies on the role of dam methylation at the Escherichia coli chromosome replication origin (oriC)Q70411656
[Molecular biology of archaebacteria]Q70435141
A hot story from comparative genomics: reverse gyrase is the only hyperthermophile-specific proteinQ74238221
Transcription and translation are coupled in ArchaeaQ79609849
A DNA topoisomerase IB in Thaumarchaeota testifies for the presence of this enzyme in the last common ancestor of Archaea and EucaryaQ21192724
The origins of phagocytosis and eukaryogenesisQ21203764
Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschiiQ22065564
Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and EucaryaQ22066209
Single-stranded DNA-binding protein hSSB1 is critical for genomic stabilityQ24336879
Archaea in coastal marine environmentsQ24564723
Phylogenetic structure of the prokaryotic domain: The primary kingdomsQ24564821
Nitrososphaera viennensis, an ammonia oxidizing archaeon from soilQ24631588
Hyperthermus butylicus, a hyperthermophilic sulfur-reducing archaebacterium that ferments peptidesQ24681760
Picrophilus gen. nov., fam. nov.: a novel aerobic, heterotrophic, thermoacidophilic genus and family comprising archaea capable of growth around pH 0Q24685126
A virocentric perspective on the evolution of lifeQ26864700
The X-ray crystal structure of RNA polymerase from ArchaeaQ27649741
A Role for the ESCRT System in Cell Division in ArchaeaQ27652900
Insights into FlaI Functions in Archaeal Motor Assembly and Motility from Structures, Conformations, and GeneticsQ27676405
Homologs of small nucleolar RNAs in ArchaeaQ28142559
A molecular view of microbial diversity and the biosphereQ28235782
Sulfolobus: A new genus of sulfur-oxidizing bacteria living at low pH and high temperatureQ28242698
Rhodopsin-like protein from the purple membrane of Halobacterium halobiumQ28248225
Comparative biochemistry of Archaea and BacteriaQ28266085
Isolation of an autotrophic ammonia-oxidizing marine archaeonQ28273549
Thermoproteales--a third order of thermoacidophilic archaebacteriaQ28273787
The mechanism of DNA transfer in the mating system of an archaebacteriumQ28280325
Frequent recombination in a saltern population of HalorubrumQ28297790
Transmission of Creutzfeldt-Jakob disease from man to the guinea pigQ28315735
Phylogeny and beyond: Scientific, historical, and conceptual significance of the first tree of lifeQ28732353
Classification of methanogenic bacteria by 16S ribosomal RNA characterizationQ28775756
The Archaebacterium Thermococcus celer Represents, a Novel Genus within the Thermophilic Branch of the ArchaebacteriaQ29012981
A giant virus in amoebaeQ29206558
Mesophilic Crenarchaeota: proposal for a third archaeal phylum, the ThaumarchaeotaQ29618150
An atypical topoisomerase II from Archaea with implications for meiotic recombinationQ29618230
Evolutionary relationship of archaebacteria, eubacteria, and eukaryotes inferred from phylogenetic trees of duplicated genesQ30004701
Pyrodictium gen. nov., a New Genus of Submarine Disc-Shaped Sulphur Reducing Archaebacteria Growing Optimally at 105°C.Q30579063
Genomic studies of uncultivated archaeaQ33216318
Archaea predominate among ammonia-oxidizing prokaryotes in soilsQ33254300
Viruses of the Archaea: a unifying viewQ33260443
From archaeon to eukaryote: the evolutionary dark ages of the eukaryotic cellQ33355183
Evolution of diverse cell division and vesicle formation systems in ArchaeaQ33684783
In vitro transcription of two rRNA genes of the archaebacterium Sulfolobus sp. B12 indicates a factor requirement for specific initiationQ33721686
Phylogenetic and phyletic studies of informational genes in genomes highlight existence of a 4 domain of life including giant virusesQ33769577
Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group.Q33775208
Archaebacterial DNA-dependent RNA polymerases testify to the evolution of the eukaryotic nuclear genomeQ33862709
Two new families of the FtsZ-tubulin protein superfamily implicated in membrane remodeling in diverse bacteria and archaeaQ33872097
Interpreting the universal phylogenetic treeQ33910024
Mutational analysis of an archaebacterial promoter: essential role of a TATA box for transcription efficiency and start-site selection in vitroQ33921470
The phylogenetic relationships of three sulfur dependent archaebacteriaQ33954485
Pandoraviruses: amoeba viruses with genomes up to 2.5 Mb reaching that of parasitic eukaryotes.Q34037519
Transcription in archaea: similarity to that in eucaryaQ34058138
A crucial role for the putative Arabidopsis topoisomerase VI in plant growth and developmentQ34099632
Giant viruses: conflicts in revisiting the virus conceptQ34121026
Evolution of the vacuolar H+-ATPase: implications for the origin of eukaryotesQ34161454
The archaeal cell envelopeQ34185088
Archaeal origin of tubulinQ34212767
The relationship between gut microbiota and weight gain in humansQ34242302
A brief history of the discovery of hyperthermophilic lifeQ34324779
A novel DNA polymerase family found in ArchaeaQ34465210
The SOSS1 single-stranded DNA binding complex promotes DNA end resection in concert with Exo1.Q34487643
Archaea on human skin.Q34775693
Archaeal nitrification in the oceanQ34944414
Aphidicolin inhibits growth and DNA synthesis in halophilic arachaebacteriaQ36303160
Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of lifeQ36407108
Lipids of Thermoplasma acidophilum.Q36835961
The particle SSV1 from the extremely thermophilic archaeon Sulfolobus is a virus: demonstration of infectivity and of transfection with viral DNA.Q37158180
Widespread distribution of archaeal reverse gyrase in thermophilic bacteria suggests a complex history of vertical inheritance and lateral gene transfersQ37202309
Particle assembly and ultrastructural features associated with replication of the lytic archaeal virus sulfolobus turreted icosahedral virusQ37204652
A unique virus release mechanism in the ArchaeaQ37256984
INTS3 controls the hSSB1-mediated DNA damage responseQ37387865
Archaeal type IV pilus-like structures--evolutionarily conserved prokaryotic surface organellesQ37863882
The archeovirusesQ37875200
Diversity, assembly and regulation of archaeal type IV pili-like and non-type-IV pili-like surface structuresQ38059325
Archaea in biogeochemical cyclesQ38117611
The major role of viruses in cellular evolution: facts and hypothesesQ38122830
The wonderful world of archaeal virusesQ38136268
The euryarchaeota, nature's medium for engineering of single-stranded DNA-binding proteins.Q38331412
Transformation of members of the genus Haloarcula with shuttle vectors based on Halobacterium halobium and Haloferax volcanii plasmid repliconsQ39935105
Genetic transformation in the methanogen Methanococcus voltae PS.Q39957058
Putative promoter elements for the ribosomal RNA genes of the thermoacidophilic archaebacterium Sulfolobus sp. strain B12.Q40389136
Analysis of transcription in the archaebacterium Sulfolobus indicates that archaebacterial promoters are homologous to eukaryotic pol II promotersQ40536345
An archaebacterial promoter element for stable RNA genes with homology to the TATA box of higher eukaryotesQ40536399
Transcription termination in the archaebacterium Sulfolobus: signal structures and linkage to transcription initiationQ40544753
A DNA polymerase from the archaeon Sulfolobus solfataricus shows sequence similarity to family B DNA polymerasesQ40547747
Ubiquitin-like small archaeal modifier proteins (SAMPs) in Haloferax volcaniiQ40620950
Reverse gyrase binding to DNA alters the double helix structure and produces single-strand cleavage in the absence of ATP.Q40819671
Chemical composition of the peptidoglycan-free cell walls of methanogenic bacteriaQ41042835
DNA-Dependent RNA Polymerase from the Archaebacterium Sulfolobus acidocaldariusQ41078781
A plasmid in the archaebacterium Sulfolobus acidocaldariusQ41311986
High positive supercoiling in vitro catalyzed by an ATP and polyethylene glycol-stimulated topoisomerase from Sulfolobus acidocaldariusQ41410812
Archaebacteria and eukaryotes possess DNA-dependent RNA polymerases of a common typeQ41459065
SAV 1, a temperate u.v.-inducible DNA virus-like particle from the archaebacterium Sulfolobus acidocaldarius isolate B12.Q41580323
Crystallography of halophilic ribosome: the isolation of an internal ribonucleoprotein complexQ41634779
Gene expression in archaebacteria: physical mapping of constitutive and UV-inducible transcripts from the Sulfolobus virus-like particle SSV1.Q42607515
The Archaebacterium Thermofilum pendens Represents, a Novel Genus of the Thermophilic, Anaerobic Sulfur Respiring ThermoprotealesQ43017121
Genetic elements in the extremely thermophilic archaeon SulfolobusQ43025837
A reporter gene system for the hyperthermophilic archaeon Sulfolobus solfataricus based on a selectable and integrative shuttle vectorQ44465855
Flagellar rotation in the archaeon Halobacterium salinarum depends on ATP.Q46373303
Identification of two origins of replication in the single chromosome of the archaeon Sulfolobus solfataricusQ47270717
P433issue10
P407language of work or nameEnglishQ1860
P921main subjectphylogeneticsQ171184
P304page(s)713-719
P577publication date2013-10-01
P1433published inNature Reviews MicrobiologyQ1071797
P1476titleThe legacy of Carl Woese and Wolfram Zillig: from phylogeny to landmark discoveries
P478volume11

Reverse relations

cites work (P2860)
Q89203002A flourishing field: going back to the roots of the Archaea
Q35482661Archaeal extrachromosomal genetic elements
Q33560358Carl Woese's vision of cellular evolution and the domains of life
Q33560399Casting a long shadow in the classroom: an educator's perspective of the contributions of Carl Woese
Q35766085Diversity and Distribution of Archaea in the Mangrove Sediment of Sundarbans
Q37590790Genome-Scale Metabolic Modeling of Archaea Lends Insight into Diversity of Metabolic Function.
Q42552138Introduction to special Carl Woese issue in RNA Biology.
Q38190447Molecular biology of fuselloviruses and their satellites.
Q26315280Nothing in Evolution Makes Sense Except in the Light of Genomics: Read-Write Genome Evolution as an Active Biological Process
Q26800168The universal tree of life: an update

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