| scholarly article | Q13442814 |
| P6179 | Dimensions Publication ID | 1044979850 |
| P356 | DOI | 10.1186/1471-2148-11-63 |
| P932 | PMC publication ID | 3063831 |
| P698 | PubMed publication ID | 21388541 |
| P5875 | ResearchGate publication ID | 50350609 |
| P2093 | author name string | Hong Ma | |
| Xinyu Zhu | |||
| Zhiduan Chen | |||
| P2860 | cites work | Translating the Histone Code | Q22065840 |
| The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools | Q24248165 | ||
| The Arabidopsis thaliana genome contains at least 29 active genes encoding SET domain proteins that can be assigned to four evolutionarily conserved classes | Q24555125 | ||
| The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes | Q24558584 | ||
| Organization, inducible-expression and chromosome localization of the human HMG-I(Y) nonhistone protein gene | Q24631920 | ||
| Conservation, diversification and expansion of C2H2 zinc finger proteins in the Arabidopsis thaliana genome | Q24793492 | ||
| SMART 5: domains in the context of genomes and networks | Q25255440 | ||
| Pfam: clans, web tools and services | Q25257103 | ||
| The neighbor-joining method: a new method for reconstructing phylogenetic trees | Q25939010 | ||
| A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach | Q27860716 | ||
| MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment | Q27860726 | ||
| ProtTest: selection of best-fit models of protein evolution | Q27860845 | ||
| Evolutionary trees from DNA sequences: A maximum likelihood approach | Q27860898 | ||
| A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood | Q27861000 | ||
| The evolutionary fate and consequences of duplicate genes | Q27861065 | ||
| Evolutionary analyses of the human genome | Q28203271 | ||
| The A.T-DNA-binding domain of mammalian high mobility group I chromosomal proteins. A novel peptide motif for recognizing DNA structure | Q28259556 | ||
| Genomic organization of plant terpene synthases and molecular evolutionary implications | Q28366747 | ||
| DNA recognition by Cys2His2 zinc finger proteins | Q29616391 | ||
| Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase | Q29617298 | ||
| PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments | Q29617502 | ||
| Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites | Q29618512 | ||
| A combined analysis of genomic and primary protein structure defines the phylogenetic relationship of new members if the T-box family | Q30429839 | ||
| Spidey: a tool for mRNA-to-genomic alignments | Q31028386 | ||
| The role of lineage-specific gene family expansion in the evolution of eukaryotes | Q31093428 | ||
| The origin of prokaryotic C2H2 zinc finger regulators | Q33832105 | ||
| Pivotal role of AtSUVH2 in heterochromatic histone methylation and gene silencing in Arabidopsis | Q33841703 | ||
| The protein encoded by the Drosophila position-effect variegation suppressor gene Su(var)3-9 combines domains of antagonistic regulators of homeotic gene complexes | Q34059541 | ||
| Systematic identification of novel protein domain families associated with nuclear functions | Q34108188 | ||
| H3 lysine 9 methylation is maintained on a transcribed inverted repeat by combined action of SUVH6 and SUVH4 methyltransferases | Q34150883 | ||
| The enhancer of position-effect variegation of Drosophila, E(var)3-93D, codes for a chromatin protein containing a conserved domain common to several transcriptional regulators | Q34345474 | ||
| Evolution of intron/exon structure of DEAD helicase family genes in Arabidopsis, Caenorhabditis, and Drosophila | Q35038116 | ||
| The Arabidopsis SUVR4 protein is a nucleolar histone methyltransferase with preference for monomethylated H3K9. | Q35130578 | ||
| Intron gain and loss in segmentally duplicated genes in rice | Q35605929 | ||
| Analysis of evolution of exon-intron structure of eukaryotic genes | Q36173290 | ||
| Heterochromatin proteins and the control of heterochromatic gene silencing in Arabidopsis | Q36356292 | ||
| The Drosophila Polycomb-group gene Enhancer of zeste contains a region with sequence similarity to trithorax | Q36823894 | ||
| Plant SET domain-containing proteins: structure, function and regulation | Q36826687 | ||
| Origin of the bacterial SET domain genes: vertical or horizontal? | Q37860785 | ||
| Genome cluster database. A sequence family analysis platform for Arabidopsis and rice | Q38520446 | ||
| Phylogenetic relationships among eutherian orders estimated from inferred sequences of mitochondrial proteins: instability of a tree based on a single gene | Q38572439 | ||
| High-level tuber expression and sucrose inducibility of a potato Sus4 sucrose synthase gene require 5' and 3' flanking sequences and the leader intron | Q42515267 | ||
| Highly heterogeneous rates of evolution in the SKP1 gene family in plants and animals: functional and evolutionary implications | Q42612381 | ||
| Gene structure dynamics and divergence of the polygalacturonase gene family of plants and fungus | Q43817993 | ||
| Dimethylation of histone H3 lysine 9 is a critical mark for DNA methylation and gene silencing in Arabidopsis thaliana. | Q44258646 | ||
| Histone modifications in Arabidopsis- high methylation of H3 lysine 9 is dispensable for constitutive heterochromatin | Q44311756 | ||
| Plants contain a high number of proteins showing sequence similarity to the animal SUV39H family of histone methyltransferases | Q45230841 | ||
| The Drosophila trithorax proteins contain a novel variant of the nuclear receptor type DNA binding domain and an ancient conserved motif found in other chromosomal proteins | Q47197423 | ||
| Patterns of gene duplication in the plant SKP1 gene family in angiosperms: evidence for multiple mechanisms of rapid gene birth | Q47790845 | ||
| Rubisco small and large subunit N-methyltransferases. Bi- and mono-functional methyltransferases that methylate the small and large subunits of Rubisco | Q47902034 | ||
| High rate of chimeric gene origination by retroposition in plant genomes | Q48086162 | ||
| NtSET1, a member of a newly identified subgroup of plant SET-domain-containing proteins, is chromatin-associated and its ectopic overexpression inhibits tobacco plant growth. | Q48329782 | ||
| Comparative analysis of SET domain proteins in maize and Arabidopsis reveals multiple duplications preceding the divergence of monocots and dicots. | Q54768088 | ||
| On Information and Sufficiency | Q56286611 | ||
| Locus-specific control of DNA methylation by the Arabidopsis SUVH5 histone methyltransferase | Q83043263 | ||
| Processed pseudogenes, processed genes, and spontaneous mutations in the Arabidopsis genome | Q83150954 | ||
| P921 | main subject | Embryophyte | Q192154 |
| phylogenetics | Q171184 | ||
| P304 | page(s) | 63 | |
| P577 | publication date | 2011-03-09 | |
| P1433 | published in | BMC Evolutionary Biology | Q13418959 |
| P1476 | title | Phylogenetics and evolution of Su(var)3-9 SET genes in land plants: rapid diversification in structure and function | |
| P478 | volume | 11 |
| Q51792944 | Complex evolutionary history and diverse domain organization of SET proteins suggest divergent regulatory interactions. |
| Q30062103 | Diversification and evolution of the SDG gene family in Brassica rapa after the whole genome triplication |
| Q34231006 | Expansion and diversification of the SET domain gene family following whole-genome duplications in Populus trichocarpa |
| Q46295491 | Genome-wide analysis of SU(VAR)3-9 distribution in chromosomes of Drosophila melanogaster |
| Q36769084 | Identification and characterization of histone lysine methylation modifiers in Fragaria vesca |
| Q47146784 | Phylogenetic relationship and domain organisation of SET domain proteins of Archaeplastida |
| Q50500835 | Phylogenetics and evolution of Trx SET genes in fully sequenced land plants. |
| Q50642024 | Pollen-specific activation of Arabidopsis retrogenes is associated with global transcriptional reprogramming. |
| Q55327645 | The Rice Rolled Fine Striped (RFS) CHD3/Mi-2 Chromatin Remodeling Factor Epigenetically Regulates Genes Involved in Oxidative Stress Responses During Leaf Development. |
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