Transcriptional regulation and spatial interactions of head-to-head genes

scientific article

Transcriptional regulation and spatial interactions of head-to-head genes is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1029824863
P356DOI10.1186/1471-2164-15-519
P932PMC publication ID4089025
P698PubMed publication ID24962804
P5875ResearchGate publication ID263394767

P2093author name stringYixue Li
Jia Wei
Yuan-Yuan Li
Yunqin Chen
P2860cites workComprehensive annotation of bidirectional promoters identifies co-regulation among breast and ovarian cancer genesQ21145667
ZNF274 recruits the histone methyltransferase SETDB1 to the 3' ends of ZNF genesQ24318366
Quantifying the relationship between co-expression, co-regulation and gene functionQ24802748
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resourcesQ27860739
High-resolution profiling of histone methylations in the human genomeQ27860906
Chromatin modifications and their functionQ27861067
Comprehensive mapping of long-range interactions reveals folding principles of the human genomeQ28131819
BRFU, a TFIIB-like factor, is directly recruited to the TATA-box of polymerase III small nuclear RNA gene promoters through its interaction with TATA-binding proteinQ28216622
Genome-wide Studies of CCCTC-binding Factor (CTCF) and Cohesin Provide Insight into Chromatin Structure and RegulationQ28274367
CTCF mediates long-range chromatin looping and local histone modification in the beta-globin locusQ28590210
Cytoscape 2.8: new features for data integration and network visualizationQ29547471
COXPRESdb: a database of comparative gene coexpression networks of eleven species for mammals.Q30579745
Systematic analysis of head-to-head gene organization: evolutionary conservation and potential biological relevanceQ33250078
The ets-related transcription factor GABP directs bidirectional transcriptionQ33306113
Long-range enhancer associated with chromatin looping allows AP-1 regulation of the peptidylarginine deiminase 3 gene in differentiated keratinocyteQ33377028
W-ChIPeaks: a comprehensive web application tool for processing ChIP-chip and ChIP-seq dataQ33765389
Sorting out inherent features of head-to-head gene pairs by evolutionary conservationQ33776321
Recent highlights of RNA-polymerase-II-mediated transcriptionQ33844508
c-Myc target genes involved in cell growth, apoptosis, and metabolismQ33956988
An abundance of bidirectional promoters in the human genomeQ34287972
Integration of Hi-C and ChIP-seq data reveals distinct types of chromatin linkagesQ34295341
In the loop: long range chromatin interactions and gene regulationQ34580688
Transcription factor binding and modified histones in human bidirectional promotersQ34637346
E2F and cell cycle control: a double-edged swordQ35095456
Spatial organization of transcription by RNA polymerase III.Q35128056
Combinatorial control of gene expression.Q35872728
BRG1 requirement for long-range interaction of a locus control region with a downstream promoter.Q37114798
DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levelsQ37465265
Serum response factor is required for immediate-early gene activation yet is dispensable for proliferation of embryonic stem cellsQ38302355
Members of the AP-1 family, c-Jun and c-Fos, functionally interact with JC virus early regulatory protein large T antigenQ39748678
Rank of correlation coefficient as a comparable measure for biological significance of gene coexpressionQ41790382
P4510describes a project that usesCytoscapeQ3699942
P407language of work or nameEnglishQ1860
P304page(s)519
P577publication date2014-06-24
P1433published inBMC GenomicsQ15765854
P1476titleTranscriptional regulation and spatial interactions of head-to-head genes
P478volume15

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cites work (P2860)
Q37667845Analysis of Co-Associated Transcription Factors via Ordered Adjacency Differences on Motif Distribution
Q33878875Genetic variability of the activity of bidirectional promoters: a pilot study in bovine muscle.
Q50034338Genome-Wide STAT3 Binding Analysis after Histone Deacetylase Inhibition Reveals Novel Target Genes in Dendritic Cells
Q37448898Global gene regulation during activation of immunoglobulin class switching in human B cells.
Q58799978Pan-Cancer Analysis Reveals Differential Susceptibility of Bidirectional Gene Promoters to DNA Methylation, Somatic Mutations, and Copy Number Alterations
Q55361998Tissue-specific impact of FADS cluster variants on FADS1 and FADS2 gene expression.