Expression variability of co-regulated genes differentiates Saccharomyces cerevisiae strains

scientific article

Expression variability of co-regulated genes differentiates Saccharomyces cerevisiae strains is …
instance of (P31):
scholarly articleQ13442814

External links are
P6179Dimensions Publication ID1027757804
P356DOI10.1186/1471-2164-12-201
P932PMC publication ID3094312
P698PubMed publication ID21507216
P5875ResearchGate publication ID51064717

P2093author name stringGabriela R Moura
Laura Carreto
Manuel A S Santos
Dorit Schuller
Inês Domingues
Maria F Eiriz
P2860cites workMicroarray karyotyping of commercial wine yeast strains reveals shared, as well as unique, genomic signaturesQ21266591
Population genomics of domestic and wild yeastsQ22122208
Noise in gene expression: origins, consequences, and controlQ24537307
The beetle gut: a hyperdiverse source of novel yeastsQ24602587
Significance analysis of microarrays applied to the ionizing radiation responseQ24606608
Metabolism of sulfur amino acids in Saccharomyces cerevisiaeQ24643503
The Ehrlich pathway for fusel alcohol production: a century of research on Saccharomyces cerevisiae metabolismQ24655293
Population genetic variation in gene expression is associated with phenotypic variation in Saccharomyces cerevisiaeQ24791620
An evolutionary and functional assessment of regulatory network motifsQ24797864
Characterization of the metabolic shift between oxidative and fermentative growth in Saccharomyces cerevisiae by comparative 13C flux analysisQ24812093
Local regulatory variation in Saccharomyces cerevisiaeQ24815011
Telomere length as a quantitative trait: genome-wide survey and genetic mapping of telomere length-control genes in yeast.Q25257733
Complex genetic interactions in a quantitative trait locusQ25257864
Exploring the metabolic and genetic control of gene expression on a genomic scaleQ27860705
Genomic expression programs in the response of yeast cells to environmental changesQ27860823
Cadmium-inducible expression of the yeast GSH1 gene requires a functional sulfur-amino acid regulatory networkQ27931271
Remodeling of yeast genome expression in response to environmental changesQ27933130
Analysis of Spt7 function in the Saccharomyces cerevisiae SAGA coactivator complex.Q27934769
Yeast Gcn5 functions in two multisubunit complexes to acetylate nucleosomal histones: characterization of an Ada complex and the SAGA (Spt/Ada) complexQ27934812
Nutrient regulation of oligopeptide transport in Saccharomyces cerevisiaeQ27936687
A general topoisomerase I-dependent transcriptional repression in the stationary phase in yeastQ27936906
Single QTL mapping and nucleotide-level resolution of a physiologic trait in wine Saccharomyces cerevisiae strainsQ27939830
Structure, function, and control of phosphoinositide-specific phospholipase CQ28646117
TM4: a free, open-source system for microarray data management and analysisQ29547339
Proteotoxic stress and inducible chaperone networks in neurodegenerative disease and agingQ29614783
Control of stochasticity in eukaryotic gene expressionQ29615955
Genetic dissection of transcriptional regulation in budding yeastQ29618883
CLICK and EXPANDER: a system for clustering and visualizing gene expression dataQ30881196
Combined global localization analysis and transcriptome data identify genes that are directly coregulated by Adr1 and Cat8.Q30983980
Genomic analysis of stationary-phase and exit in Saccharomyces cerevisiae: gene expression and identification of novel essential genes.Q33207493
Genetic complexity and quantitative trait loci mapping of yeast morphological traitsQ33275300
Genetic basis of proteome variation in yeastQ33303371
Cell-to-cell stochastic variation in gene expression is a complex genetic trait.Q33327696
Variations in stress sensitivity and genomic expression in diverse S. cerevisiae isolatesQ33377460
Comparative genomics of wild type yeast strains unveils important genome diversityQ33382530
On the origins of wine yeastQ33860804
Empirical establishment of oligonucleotide probe design criteriaQ33884644
Evolution and variation of the yeast (Saccharomyces) genomeQ33898276
Genealogy of principal strains of the yeast genetic stock centerQ33951962
The regulator of the yeast proline utilization pathway is differentially phosphorylated in response to the quality of the nitrogen sourceQ33961732
Monitoring global messenger RNA changes in externally controlled microarray experiments.Q34236555
Genome-wide analysis of the biology of stress responses through heat shock transcription factorQ34347448
Characteristic genome rearrangements in experimental evolution of Saccharomyces cerevisiaeQ34415662
Invasive Saccharomyces infection: a comprehensive reviewQ34464992
Genetic interactions between polymorphisms that affect gene expression in yeastQ34468390
Saccharomyces cerevisiae virulence phenotype as determined with CD-1 mice is associated with the ability to grow at 42 degrees C and form pseudohyphae.Q34548031
Phenotypic consequences of promoter-mediated transcriptional noiseQ34594662
Bread, beer and wine: Saccharomyces cerevisiae diversity reflects human historyQ34627793
Natural populations of Saccharomyces kudriavzevii in Portugal are associated with oak bark and are sympatric with S. cerevisiae and S. paradoxus.Q34751334
Global gene expression analysis of yeast cells during sake brewingQ35130058
ER-to-Golgi transport: COP I and COP II function (Review).Q35189821
The population biology and evolutionary significance of Ty elements in Saccharomyces cerevisiaeQ35236991
Manifold anomalies in gene expression in a vineyard isolate of Saccharomyces cerevisiae revealed by DNA microarray analysisQ35436640
Genetic dissection of ethanol tolerance in the budding yeast Saccharomyces cerevisiaeQ35730161
Protein synthesis in long-term stationary-phase cultures of Saccharomyces cerevisiaeQ35975291
Genome evolution mediated by Ty elements in SaccharomycesQ36225272
Genetic variation in the cysteine biosynthesis pathway causes sensitivity to pharmacological compoundsQ36288606
Yeasts illustrate the molecular mechanisms of eukaryotic genome evolutionQ36491049
Regulation of nuclear processes by inositol polyphosphatesQ36510091
Proline as a stress protectant in yeast: physiological functions, metabolic regulations, and biotechnological applicationsQ37273344
Eukaryote-to-eukaryote gene transfer events revealed by the genome sequence of the wine yeast Saccharomyces cerevisiae EC1118.Q37339735
Dynamics of the yeast transcriptome during wine fermentation reveals a novel fermentation stress responseQ37341549
Genetics of yeast impacting wine qualityQ37963035
Genetic properties influencing the evolvability of gene expressionQ38301418
Multiple pathways are co-regulated by the protein kinase Snf1 and the transcription factors Adr1 and Cat8.Q38355889
Natural isolates of Saccharomyces cerevisiae display complex genetic variation in sporulation efficiencyQ38583359
Functional genomic analysis of a commercial wine strain of Saccharomyces cerevisiae under differing nitrogen conditionsQ39395801
Comparative genomic hybridization provides new insights into the molecular taxonomy of the Saccharomyces sensu stricto complexQ40901293
Genetic diversity in yeast assessed with whole-genome oligonucleotide arraysQ41822025
Genetic interactions between transcription factors cause natural variation in yeastQ42036505
Role of nitrogen and carbon transport, regulation, and metabolism genes for Saccharomyces cerevisiae survival in vivoQ42582639
Comprehensive polymorphism survey elucidates population structure of Saccharomyces cerevisiaeQ42666175
Conserved processes and lineage-specific proteins in fungal cell wall evolution.Q42909540
Computational approaches for the genetic and phenotypic characterization of a Saccharomyces cerevisiae wine yeast collectionQ43247317
Relationship between varietal amino acid profile of grapes and wine aromatic composition. Experiments with model solutions and chemometric study.Q43975171
Saccharomyces cerevisiae and Saccharomyces paradoxus coexist in a natural woodland site in North America and display different levels of reproductive isolation from European conspecificsQ44408152
Genome-wide monitoring of wine yeast gene expression during alcoholic fermentationQ44685528
Integrating naive Bayes models and external knowledge to examine copper and iron homeostasis in S. cerevisiaeQ46129622
Quantitative trait loci mapped to single-nucleotide resolution in yeastQ46250459
Screening for candidate genes involved in tolerance to organic solvents in yeastQ46956699
Identification and distinct regulation of yeast TATA box-containing genesQ47987647
Population genetic variation in genome-wide gene expression.Q53863331
Cascading transcriptional effects of a naturally occurring frameshift mutation in Saccharomyces cerevisiaeQ57202952
Genome-wide scan reveals that genetic variation for transcriptional plasticity in yeast is biased towards multi-copy and dispensable genesQ57202958
Genetic basis of individual differences in the response to small-molecule drugs in yeastQ57910750
Quantitative analysis of wine yeast gene expression profiles under winemaking conditionsQ57977722
Chromosomal evolution in SaccharomycesQ58377074
Glucose starvation induces a drastic reduction in the rates of both transcription and degradation of mRNA in yeastQ73666167
Trans-acting regulatory variation in Saccharomyces cerevisiae and the role of transcription factorsQ73747425
An oligopeptide transporter gene family in ArabidopsisQ77481729
Ploidy regulation of gene expressionQ77978027
Fermentative lifestyle in yeasts belonging to the Saccharomyces complexQ79613638
A genetic signature of interspecies variations in gene expressionQ79749665
Metabolism of sulfur amino acids in Saccharomyces cerevisiaeQ126946738
P407language of work or nameEnglishQ1860
P921main subjectSaccharomyces cerevisiaeQ719725
P304page(s)201
P577publication date2011-04-20
P1433published inBMC GenomicsQ15765854
P1476titleExpression variability of co-regulated genes differentiates Saccharomyces cerevisiae strains
P478volume12