rpoB-based microbial community analysis avoids limitations inherent in 16S rRNA gene intraspecies heterogeneity.

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rpoB-based microbial community analysis avoids limitations inherent in 16S rRNA gene intraspecies heterogeneity. is …
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scholarly articleQ13442814

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P356DOI10.1128/AEM.66.8.3376-3380.2000
P932PMC publication ID92158
P698PubMed publication ID10919794

P50authorStaffan KjellebergQ38361689
Ingela DahllöfQ56530556
P2093author name stringH Baillie
P2860cites workChanges in bacterial and eukaryotic community structure after mass lysis of filamentous cyanobacteria associated with virusesQ24550579
Bias in template-to-product ratios in multitemplate PCRQ33716936
Detritus-dependent development of the microbial community in an experimental system: qualitative analysis by denaturing gradient gel electrophoresisQ33863455
Identification of mycobacterial species by comparative sequence analysis of the RNA polymerase gene (rpoB).Q33960731
Quantifying microbial diversity: morphotypes, 16S rRNA genes, and carotenoids of oxygenic phototrophs in microbial matsQ33984188
Effect of phenylurea herbicides on soil microbial communities estimated by analysis of 16S rRNA gene fingerprints and community-level physiological profilesQ33984392
Identification of a novel group of bacteria in sludge from a deteriorated biological phosphorus removal reactorQ33984473
Intraspecific variation in small-subunit rRNA sequences in GenBank: why single sequences may not adequately represent prokaryotic taxaQ34374131
Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCRQ35188832
Seasonal distributions of dominant 16S rRNA-defined populations in a hot spring microbial mat examined by denaturing gradient gel electrophoresisQ35199465
Frequency of formation of chimeric molecules as a consequence of PCR coamplification of 16S rRNA genes from mixed bacterial genomes.Q35206175
Polymerase evolution and organism evolutionQ35653466
Recognition of chimeric small-subunit ribosomal DNAs composed of genes from uncultivated microorganisms.Q36052420
Effect of genome size and rrn gene copy number on PCR amplification of 16S rRNA genes from a mixture of bacterial speciesQ36688062
rpoB sequence analysis as a novel basis for bacterial identificationQ38554209
Spatial heterogeneity of bacterial populations along an environmental gradient at a shallow submarine hydrothermal vent near Milos Island (Greece).Q39527602
Two distinct mechanisms cause heterogeneity of 16S rRNA.Q39547112
Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresisQ39842874
Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysisQ41694742
Analysis of the beta' subunit of DNA-dependent RNA polymerase does not support the hypothesis inferred from 16S rRNA analysis that Oenococcus oeni (formerly Leuconostoc oenos) is a tachytelic (fast-evolving) bacteriumQ45312695
Application of temperature-gradient gel electrophoresis in taxonomy of coryneform bacteriaQ45313183
Patterns of sequence variation in two regions of the 16S rRNA multigene family of Escherichia coliQ45313287
Prokaryotic Genome Size and SSU rDNA Copy Number: Estimation of Microbial Relative Abundance from a Mixed PopulationQ47259750
Analysis of bacterial communities on historical glass by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA.Q47959183
Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology.Q51206912
Assessment of bacterial community structure in soil by polymerase chain reaction and denaturing gradient gel electrophoresisQ73081231
Novel techniques for analysing microbial diversity in natural and perturbed environmentsQ77584104
P433issue8
P407language of work or nameEnglishQ1860
P921main subjectheterogeneityQ928498
P304page(s)3376-3380
P577publication date2000-08-01
P1433published inApplied and Environmental MicrobiologyQ4781593
P1476titlerpoB-based microbial community analysis avoids limitations inherent in 16S rRNA gene intraspecies heterogeneity
P478volume66

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