JAGUC--a software package for environmental diversity analyses.

scientific article

JAGUC--a software package for environmental diversity analyses. is …
instance of (P31):
scholarly articleQ13442814

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P8978DBLP publication IDjournals/jbcb/NebelWHHRSS11
P356DOI10.1142/S0219720011005781
P698PubMed publication ID22084012

P50authorSebastian WildQ61761250
Thorsten StoeckQ88852328
P2093author name stringMarkus E Nebel
Matthias Sperber
Raphael Reitzig
Michael Holzhauser
Lars Hüttenberger
P2860cites workMUSCLE: a multiple sequence alignment method with reduced time and space complexityQ21284290
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QIIME allows analysis of high-throughput community sequencing dataQ24616873
Microbial diversity in the deep sea and the underexplored "rare biosphere"Q24685531
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequencesQ29547172
A greedy algorithm for aligning DNA sequencesQ29547622
Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richnessQ29614293
Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimatesQ29616592
Mapping of picoeucaryotes in marine ecosystems with quantitative PCR of the 18S rRNA geneQ33228592
Ecology. Dipping into the rare biosphere.Q33268998
ESPRIT: estimating species richness using large collections of 16S rRNA pyrosequencesQ33439384
Massively parallel tag sequencing reveals the complexity of anaerobic marine protistan communitiesQ33514749
Mapping the protistan 'rare biosphere'.Q33523381
PANGEA: pipeline for analysis of next generation ampliconsQ33534158
Ironing out the wrinkles in the rare biosphere through improved OTU clusteringQ33541671
Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic waterQ33544843
Ecology of the rare microbial biosphere of the Arctic OceanQ33552250
Depicting more accurate pictures of protistan community complexity using pyrosequencing of hypervariable SSU rRNA gene regions.Q33807721
The correlation between rDNA copy number and genome size in eukaryotesQ48000583
P433issue6
P921main subjectsoftware packageQ1995545
softwareQ7397
P304page(s)749-773
P577publication date2011-12-01
P1433published inJournal of Bioinformatics and Computational BiologyQ6294841
P1476titleJAGUC--a software package for environmental diversity analyses
P478volume9