Identification of a regulatory variant that binds FOXA1 and FOXA2 at the CDC123/CAMK1D type 2 diabetes GWAS locus

scientific article

Identification of a regulatory variant that binds FOXA1 and FOXA2 at the CDC123/CAMK1D type 2 diabetes GWAS locus is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1371/JOURNAL.PGEN.1004633
P932PMC publication ID4161327
P698PubMed publication ID25211022
P5875ResearchGate publication ID265560126

P50authorKaren L MohlkeQ59812940
P2093author name stringMarie P Fogarty
Swarooparani Vadlamudi
Maren E Cannon
Kyle J Gaulton
P2860cites workA user's guide to the encyclopedia of DNA elements (ENCODE)Q21092716
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Prominent expression and activity-dependent nuclear translocation of Ca2+/calmodulin-dependent protein kinase Idelta in hippocampal neuronsQ24297810
Characterization of the role of CaMKI-like kinase (CKLiK) in human granulocyte functionQ24300316
Cdc123 and checkpoint forkhead associated with RING proteins control the cell cycle by controlling eIF2gamma abundanceQ24301653
Foxa2 integrates the transcriptional response of the hepatocyte to fasting.Q51512450
Heritability of type II (non-insulin-dependent) diabetes mellitus and abnormal glucose tolerance--a population-based twin study.Q54103713
Dynamic regulation of Pdx1 enhancers by Foxa1 and Foxa2 is essential for pancreas development.Q34657904
RNAi screening in primary human hepatocytes of genes implicated in genome-wide association studies for roles in type 2 diabetes identifies roles for CAMK1D and CDKAL1, among others, in hepatic glucose regulationQ34804320
Insights into the molecular mechanism for type 2 diabetes susceptibility at the KCNQ1 locus from temporal changes in imprinting status in human islets.Q36635375
Allele-specific transcriptional activity at type 2 diabetes-associated single nucleotide polymorphisms in regions of pancreatic islet open chromatin at the JAZF1 locusQ36795945
Genetic and molecular insights into the role of PROX1 in glucose metabolismQ36796074
Maps of open chromatin highlight cell type-restricted patterns of regulatory sequence variation at hematological trait lociQ36973621
Cell-type, allelic, and genetic signatures in the human pancreatic beta cell transcriptomeQ37138688
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Identification and characterization of CKLiK, a novel granulocyte Ca(++)/calmodulin-dependent kinaseQ40846395
Isolation of INS-1-derived cell lines with robust ATP-sensitive K+ channel-dependent and -independent glucose-stimulated insulin secretionQ40871524
Establishment of a pancreatic beta cell line that retains glucose-inducible insulin secretion: special reference to expression of glucose transporter isoformsQ41729392
The P446L variant in GCKR associated with fasting plasma glucose and triglyceride levels exerts its effect through increased glucokinase activity in liverQ42096203
Using zebrafish transgenesis to test human genomic sequences for specific enhancer activityQ42436462
Twelve type 2 diabetes susceptibility loci identified through large-scale association analysisQ24609915
Five years of GWAS discoveryQ24610574
The UCSC Genome Browser database: update 2011Q24625811
Histone H3K27ac separates active from poised enhancers and predicts developmental stateQ24628758
Epigenetic switch involved in activation of pioneer factor FOXA1-dependent enhancersQ24630926
Nucleosome-binding affinity as a primary determinant of the nuclear mobility of the pioneer transcription factor FoxAQ24646046
JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 updateQ24650787
Intronic cis-regulatory modules mediate tissue-specific and microbial control of angptl4/fiaf transcriptionQ27334496
Translation initiation requires cell division cycle 123 (Cdc123) to facilitate biogenesis of the eukaryotic initiation factor 2 (eIF2).Q27937302
Histone modifications at human enhancers reflect global cell-type-specific gene expressionQ28238467
Insulin storage and glucose homeostasis in mice null for the granule zinc transporter ZnT8 and studies of the type 2 diabetes-associated variantsQ28249275
The Human Epigenome Browser at Washington UniversityQ28254288
Large-scale association analysis provides insights into the genetic architecture and pathophysiology of type 2 diabetesQ28272915
A statistical framework for joint eQTL analysis in multiple tissuesQ28397927
The Genotype-Tissue Expression (GTEx) projectQ28657968
Genome-wide association study in individuals of South Asian ancestry identifies six new type 2 diabetes susceptibility lociQ29417126
Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetesQ29417138
Opening of compacted chromatin by early developmental transcription factors HNF3 (FoxA) and GATA-4Q29618736
Bridging the gap between genetic associations and molecular mechanisms for type 2 diabetes.Q30354544
Genome-wide association and large-scale follow up identifies 16 new loci influencing lung function.Q30427183
Impact of type 2 diabetes susceptibility variants on quantitative glycemic traits reveals mechanistic heterogeneityQ33646698
A map of open chromatin in human pancreatic isletsQ33687905
Identification of new genetic risk variants for type 2 diabetesQ33700532
Maps of open chromatin guide the functional follow-up of genome-wide association signals: application to hematological traitsQ33954469
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identityQ34027627
Cellular characterisation of the GCKR P446L variant associated with type 2 diabetes risk.Q34061825
Foxa1 and Foxa2 maintain the metabolic and secretory features of the mature beta-cellQ34132210
Chromatin stretch enhancer states drive cell-specific gene regulation and harbor human disease risk variantsQ34377776
Pancreatic islet enhancer clusters enriched in type 2 diabetes risk-associated variantsQ34397259
Global epigenomic analysis of primary human pancreatic islets provides insights into type 2 diabetes susceptibility lociQ34518460
The initiation of liver development is dependent on Foxa transcription factorsQ34650705
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue9
P921main subjectgenome-wide association studyQ1098876
type 2 diabetesQ3025883
P304page(s)e1004633
P577publication date2014-09-11
P1433published inPLOS GeneticsQ1893441
P1476titleIdentification of a regulatory variant that binds FOXA1 and FOXA2 at the CDC123/CAMK1D type 2 diabetes GWAS locus
P478volume10

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