scholarly article | Q13442814 |
P818 | arXiv ID | cond-mat/0207510 |
P356 | DOI | 10.1016/S0006-3495(03)74867-X |
P932 | PMC publication ID | 1302628 |
P698 | PubMed publication ID | 12524300 |
P50 | author | Marek Cieplak | Q43023742 |
P2093 | author name string | Trinh Xuan Hoang | |
P2860 | cites work | The Protein Data Bank: a computer-based archival file for macromolecular structures | Q27860989 |
The packing density in proteins: standard radii and volumes. | Q30322192 | ||
A theoretical search for folding/unfolding nuclei in three-dimensional protein structures | Q30322988 | ||
A surprising simplicity to protein folding. | Q30326802 | ||
Go-ing for the prediction of protein folding mechanisms | Q33750611 | ||
Topology, stability, sequence, and length: defining the determinants of two-state protein folding kinetics | Q34031904 | ||
Contact order, transition state placement and the refolding rates of single domain proteins. | Q34464266 | ||
Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures | Q35647310 | ||
A simple model for calculating the kinetics of protein folding from three-dimensional structures | Q35647438 | ||
Investigation of routes and funnels in protein folding by free energy functional methods | Q35779502 | ||
Folding funnels and energy landscapes of larger proteins within the capillarity approximation | Q36180676 | ||
Analysis of multiple folding routes of proteins by a coarse-grained dynamics model | Q40198337 | ||
Folding pathways of prion and doppel | Q40220027 | ||
Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins | Q41734718 | ||
Scaling of folding properties in go models of proteins | Q42712206 | ||
Multiple time step diffusive Langevin dynamics for proteins | Q46356926 | ||
Roles of native topology and chain-length scaling in protein folding: a simulation study with a Go-like model. | Q52053541 | ||
Local interactions dominate folding in a simple protein model. | Q52303089 | ||
Noninteracting local‐structure model of folding and unfolding transition in globular proteins. II. Application to two‐dimensional lattice proteins | Q52738077 | ||
Role of secondary motifs in fast folding polymers: a dynamical variational principle. | Q53903762 | ||
Kinetics and thermodynamics of folding of a de novo designed four-helix bundle protein | Q71768491 | ||
Protein folding kinetics: timescales, pathways and energy landscapes in terms of sequence-dependent properties | Q73175501 | ||
Rate of protein folding near the point of thermodynamic equilibrium between the coil and the most stable chain fold | Q73308013 | ||
Kinetic nonoptimality and vibrational stability of proteins | Q73883517 | ||
Chain Length Scaling of Protein Folding Time | Q74575112 | ||
Thermal folding and mechanical unfolding pathways of protein secondary structures | Q74721944 | ||
Folding and stretching in a Go-like model of titin | Q74721951 | ||
P433 | issue | 1 | |
P407 | language of work or name | English | Q1860 |
P921 | main subject | protein folding | Q847556 |
P304 | page(s) | 475-488 | |
P577 | publication date | 2003-01-01 | |
P1433 | published in | Biophysical Journal | Q2032955 |
P1476 | title | Universality classes in folding times of proteins | |
P478 | volume | 84 |
Q21145342 | A Stevedore's protein knot |
Q43058001 | A critical assessment of the topomer search model of protein folding using a continuum explicit-chain model with extensive conformational sampling |
Q87071457 | A theoretical study of the unfolding pathway of reduced human serum albumin |
Q42057584 | A unification of the elastic network model and the Gaussian network model for optimal description of protein conformational motions and fluctuations |
Q35818532 | An Exploration of the Universe of Polyglutamine Structures |
Q41006098 | Anharmonic normal mode analysis of elastic network model improves the modeling of atomic fluctuations in protein crystal structures. |
Q24609710 | BSDB: the biomolecule stretching database |
Q39821415 | Basis for a neuronal version of Grover's quantum algorithm |
Q42090270 | Chevron behavior and isostable enthalpic barriers in protein folding: successes and limitations of simple Gō-like modeling. |
Q43023667 | Citrate synthase proteins in extremophilic organisms: studies within a structure-based model |
Q40078821 | Coarse-grained molecular dynamics simulations of nanopatterning with multivalent inks |
Q34354299 | Confinement effects on the thermodynamics of protein folding: Monte Carlo simulations |
Q30357288 | Contour length and refolding rate of a small protein controlled by engineered disulfide bonds. |
Q47751780 | Cooperativity and contact order in protein folding |
Q53099413 | Criteria for folding in structure-based models of proteins. |
Q30486306 | Dodging the crisis of folding proteins with knots |
Q27330899 | Dynamic prestress in a globular protein |
Q41885666 | Evidence for the principle of minimal frustration in the evolution of protein folding landscapes |
Q51742999 | Hydrodynamic interactions in protein folding. |
Q35067284 | Inferring the rate-length law of protein folding |
Q37462223 | Insights from coarse-grained Gō models for protein folding and dynamics |
Q33480691 | Large-scale evaluation of dynamically important residues in proteins predicted by the perturbation analysis of a coarse-grained elastic model |
Q53629462 | Lattice tube model of proteins. |
Q33513957 | Mechanical strength of 17,134 model proteins and cysteine slipknots |
Q46830191 | Mechanical unfolding of ubiquitin molecules |
Q54299087 | Mechanostability of cohesin-dockerin complexes in a structure-based model: anisotropy and lack of universality in the force profiles. |
Q47424792 | Multiple molecule effects on the cooperativity of protein folding transitions in simulations |
Q34778579 | Nanoindentation of 35 virus capsids in a molecular model: relating mechanical properties to structure |
Q41696692 | New views on phototransduction from atomic force microscopy and single molecule force spectroscopy on native rods. |
Q42598463 | On the role of thermal backbone fluctuations in myoglobin ligand gate dynamics |
Q30384466 | Optimal modeling of atomic fluctuations in protein crystal structures for weak crystal contact interactions. |
Q51226738 | Optimum folding pathways of proteins: their determination and properties. |
Q42153432 | Predicting the order in which contacts are broken during single molecule protein stretching experiments |
Q34310114 | Protein unfolding by biological unfoldases: insights from modeling |
Q46941181 | Proteins in a shear flow |
Q42771246 | Selection of optimal variants of Gō-like models of proteins through studies of stretching |
Q51421152 | Stiffness of the C-terminal disordered linker affects the geometry of the active site in endoglucanase Cel8A. |
Q58879043 | Stretching of proteins in a uniform flow |
Q48011885 | Stretching of proteins in the entropic limit |
Q31121979 | Stretching to understand proteins - a survey of the protein data bank |
Q47373699 | Structural entanglements in protein complexes |
Q42256964 | Structure-based analysis of thermodynamic and mechanical properties of cavity-containing proteins--case study of plant pathogenesis-related proteins of class 10. |
Q51374828 | Temperature dependence and counter effect of the correlations of folding rate with chain length and with native topology. |
Q38652200 | The length but not the sequence of peptide linker modules exerts the primary influence on the conformations of protein domains in cellulosome multi-enzyme complexes. |
Q51777291 | Theoretical tests of the mechanical protection strategy in protein nanomechanics. |
Q51890441 | Tightening of knots in proteins. |
Q38091470 | Topological features in stretching of proteins |
Q37554500 | Topological transformations in proteins: effects of heating and proximity of an interface |
Q53026162 | Unbinding and unfolding of adhesion protein complexes through stretching: interplay between shear and tensile mechanical clamps. |
Q50608781 | Unfolding knots by proteasome-like systems: simulations of the behaviour of folded and neurotoxic proteins. |
Q53629521 | Unified perspective on proteins: a physics approach. |
Q41899145 | What have we learned from the studies of two-state folders, and what are the unanswered questions about two-state protein folding? |
Search more.