| scholarly article | Q13442814 |
| P50 | author | Angel E. García | Q89238894 |
| P2093 | author name string | Shekhar Garde | |
| Tuhin Ghosh | |||
| P2860 | cites work | Comparison of simple potential functions for simulating liquid water | Q26778447 |
| Designing a 20-residue protein | Q27638909 | ||
| Conformational strain in the hydrophobic core and its implications for protein folding and design | Q27638976 | ||
| Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes | Q29397708 | ||
| Helix propensities of short peptides: molecular dynamics versus bioinformatics. | Q30332484 | ||
| Helix formation via conformation diffusion search | Q30819952 | ||
| Helix nucleation kinetics from molecular simulations in explicit solvent | Q30969625 | ||
| Alpha-helical stabilization by side chain shielding of backbone hydrogen bonds | Q34014321 | ||
| Unusually stable helix formation in short alanine-based peptides | Q34289699 | ||
| Helix stabilization by Glu-...Lys+ salt bridges in short peptides of de novo design | Q34376818 | ||
| Urea unfolding of peptide helices as a model for interpreting protein unfolding | Q34825588 | ||
| The mechanism of alpha-helix formation by peptides | Q35836992 | ||
| Electrostatic screening of charge and dipole interactions with the helix backbone | Q36780118 | ||
| Fast events in protein folding: helix melting and formation in a small peptide. | Q36789506 | ||
| The intrinsic helix-forming tendency of L-alanine | Q37165839 | ||
| Physical reasons for the unusual alpha-helix stabilization afforded by charged or neutral polar residues in alanine-rich peptides | Q37281519 | ||
| Nature of the charged-group effect on the stability of the C-peptide helix | Q37684326 | ||
| Stability of proteins. Proteins which do not present a single cooperative system | Q40252820 | ||
| Effect of a single aspartate on helix stability at different positions in a neutral alanine-based peptide | Q42129666 | ||
| Helix propensities of the amino acids measured in alanine-based peptides without helix-stabilizing side-chain interactions. | Q42244726 | ||
| Structure of Met-enkephalin in explicit aqueous solution using replica exchange molecular dynamics | Q43864571 | ||
| Solubilized, spaced polyalanines: a context-free system for determining amino acid alpha-helix propensities | Q43878007 | ||
| A hierarchic approach to the design of hexameric helical barrels | Q44019168 | ||
| Determination of free energies of N-capping in alpha-helices by modification of the Lifson-Roig helix-coil therapy to include N- and C-capping. | Q44705720 | ||
| Rapidly recovering hydrogel scaffolds from self-assembling diblock copolypeptide amphiphiles | Q46094790 | ||
| Reversible hydrogels from self-assembling artificial proteins | Q47837823 | ||
| Conformational studies of poly-L-alanine in water. | Q54602751 | ||
| Replica-exchange molecular dynamics method for protein folding | Q55879366 | ||
| A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules | Q55918670 | ||
| Theory of the Phase Transition between Helix and Random Coil in Polypeptide Chains | Q56522033 | ||
| Molecular dynamics with coupling to an external bath | Q57569060 | ||
| Conformational Diffusion and Helix Formation Kinetics | Q57875246 | ||
| Computer simulation of aqueous Na-Cl electrolytes | Q57875620 | ||
| Simulated Tempering: A New Monte Carlo Scheme | Q64357627 | ||
| Exploring the energy landscape of a beta hairpin in explicit solvent | Q73379963 | ||
| Folding-unfolding thermodynamics of a beta-heptapeptide from equilibrium simulations | Q74452346 | ||
| P433 | issue | 5 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | molecular model | Q2196961 |
| chemical model | Q25109595 | ||
| biophysics | Q7100 | ||
| P304 | page(s) | 3187-3193 | |
| P577 | publication date | 2003-11-01 | |
| P1433 | published in | Biophysical Journal | Q2032955 |
| P1476 | title | Role of backbone hydration and salt-bridge formation in stability of alpha-helix in solution | |
| Role of Backbone Hydration and Salt-Bridge Formation in Stability of α-Helix in Solution | |||
| P478 | volume | 85 |
| Q41829181 | Circular dichroism and ultraviolet resonance Raman indicate little Arg-Glu side chain α-helix peptide stabilization |
| Q46099566 | Contribution of arginine-glutamate salt bridges to helix stability |
| Q35022251 | Direct assessment of the α-helix nucleation time |
| Q36869856 | Dynamic charge interactions create surprising rigidity in the ER/K alpha-helical protein motif |
| Q61821271 | Dynamic ion pair behavior stabilizes single alpha helices in proteins |
| Q34984717 | Effects of solvent on the structure of the Alzheimer amyloid-beta(25-35) peptide |
| Q33818377 | Enthalpy of helix-coil transition: missing link in rationalizing the thermodynamics of helix-forming propensities of the amino acid residues |
| Q64239170 | Exposing the Nucleation Site in α-Helix Folding: A Joint Experimental and Simulation Study |
| Q43900019 | How the diffusivity profile reduces the arbitrariness of protein folding free energies. |
| Q35121335 | Impact of the mutation A21G (Flemish variant) on Alzheimer's beta-amyloid dimers by molecular dynamics simulations |
| Q51637089 | In silico approach to explore the disruption in the molecular mechanism of human hyaluronidase 1 by mutant E268K that directs Natowicz syndrome. |
| Q36207942 | Inclusion of many-body effects in the additive CHARMM protein CMAP potential results in enhanced cooperativity of α-helix and β-hairpin formation |
| Q41812654 | Influence of Glu/Arg, Asp/Arg, and Glu/Lys Salt Bridges on α-Helical Stability and Folding Kinetics |
| Q48048113 | Microscopic nucleation and propagation rates of an alanine-based α-helix. |
| Q42697889 | Mixed-salt effects on the conformation of a short salt-bridge-forming α helix: a simulation study. |
| Q51061591 | Molecular dynamics study of an insertion/duplication mutant of bacteriophage T4 lysozyme reveals the nature of α→β transition in full protein context. |
| Q48255419 | N-terminal diproline and charge group effects on the stabilization of helical conformation in alanine-based short peptides: CD studies with water and methanol as solvent |
| Q35315878 | Nature of structural inhomogeneities on folding a helix and their influence on spectral measurements |
| Q42411748 | Salt dependence of an alpha-helical peptide folding energy landscapes |
| Q45848655 | Salt effects on hydrophobic-core formation in folding of a helical miniprotein studied by molecular dynamics simulations. |
| Q33856497 | Small and Random Peptides: An Unexplored Reservoir of Potentially Functional Primitive Organocatalysts. The Case of Seryl-Histidine |
| Q42037889 | Solvent effects on the conformational transition of a model polyalanine peptide |
| Q36250093 | Temperature dependence of water interactions with the amide carbonyls of α-helices |
| Q33294390 | The effect of charge-charge interactions on the kinetics of alpha-helix formation |
| Q50627238 | The solvent-dependent shift of the amide I band of a fully solvated peptide as a local probe for the solvent composition in the peptide/solvent interface. |
| Q28248224 | The unfolded state of the villin headpiece helical subdomain: computational studies of the role of locally stabilized structure |
Search more.