Genomic insights into the evolutionary origin of Xanthomonas axonopodis pv. citri and its ecological relatives

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Genomic insights into the evolutionary origin of Xanthomonas axonopodis pv. citri and its ecological relatives is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/AEM.01654-14
P932PMC publication ID4178650
P698PubMed publication ID25085494
P5875ResearchGate publication ID264463732

P50authorSamriti MidhaQ61805313
Prabhu B PatilQ35821611
P2093author name stringPrabhu B Patil
Samriti Midha
P2860cites workIn silico analysis of nonribosomal peptide synthetases of Xanthomonas axonopodis pv. citri: identification of putative siderophore and lipopeptide biosynthetic genesQ38515416
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Albicidin pathotoxin produced by Xanthomonas albilineans is encoded by three large PKS and NRPS genes present in a gene cluster also containing several putative modifying, regulatory, and resistance genesQ42624604
Novel genomic locus with atypical G+C content that is required for extracellular polysaccharide production and virulence in Xanthomonas oryzae pv. oryzaeQ42666267
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A new bacterial disease of Mangifera indica L.Q44742095
Phylogenetic structure of Xanthomonas determined by comparison of gyrB sequences.Q45318876
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Xanthomonas citri: breaking the surfaceQ48723776
The new IS1595 family, its relation to IS1 and the frontier between insertion sequences and transposons.Q51848539
The repetitive DNA elements called CRISPRs and their associated genes: evidence of horizontal transfer among prokaryotes.Q52422256
WebACT--an online companion for the Artemis Comparison ToolQ57518126
Emended classification of xanthomonad pathogens on citrusQ79446076
Reclassification of Xanthomonas campestris pv. citri (ex Hasse 1915) Dye 1978 forms A, B/C/D, and E as X. smithii subsp. citri (ex Hasse) sp. nov. nom. rev. comb. nov., X. fuscans subsp. aurantifolii (ex Gabriel 1989) sp. nov. nom. rev. comb. nov.,Q81070416
A simple, fast, and accurate method of phylogenomic inferenceQ21184110
Variation suggestive of horizontal gene transfer at a lipopolysaccharide (lps) biosynthetic locus in Xanthomonas oryzae pv. oryzae, the bacterial leaf blight pathogen of riceQ21263090
The RAST Server: rapid annotations using subsystems technologyQ21263157
Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patternsQ22066341
Comparison of the genomes of two Xanthomonas pathogens with differing host specificitiesQ22122346
Integrons in Xanthomonas: a source of species genome diversityQ24555753
RNAmmer: consistent and rapid annotation of ribosomal RNA genesQ24675768
Structural Basis of the Interaction of MbtH-like Proteins, Putative Regulators of Nonribosomal Peptide Biosynthesis, with Adenylating EnzymesQ27675322
Structure and function of 59-base element recombination sites associated with mobile gene cassettesQ28258818
A hybrid NRPS-PKS gene cluster related to the bleomycin family of antitumor antibiotics in Alteromonas macleodii strainsQ28533649
Polyphasic characterization of xanthomonads pathogenic to members of the Anacardiaceae and their relatedness to species of XanthomonasQ29038363
Mauve: multiple alignment of conserved genomic sequence with rearrangementsQ29547292
Shifting the genomic gold standard for the prokaryotic species definitionQ29616599
CRISPR interference: RNA-directed adaptive immunity in bacteria and archaeaQ29617488
MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequencesQ29617490
Inference of bacterial microevolution using multilocus sequence dataQ31083111
Genome mining reveals the genus Xanthomonas to be a promising reservoir for new bioactive non-ribosomally synthesized peptidesQ31140206
The role of horizontal transfer in the evolution of a highly variable lipopolysaccharide biosynthesis locus in xanthomonads that infect rice, citrus and crucifersQ33308349
Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A.Q33331470
Evolutionary pathway to increased virulence and epidemic group A Streptococcus disease derived from 3,615 genome sequencesQ33674247
Genomic insights that advance the species definition for prokaryotesQ33850939
SBSPKS: structure based sequence analysis of polyketide synthasesQ33957606
Genetic Contributions to Understanding Polyketide SynthasesQ34114722
Cryptic polyketide synthase genes in non-pathogenic Clostridium SPPQ34123755
The natural product domain seeker NaPDoS: a phylogeny based bioinformatic tool to classify secondary metabolite gene diversityQ34222047
Genomic insights into strategies used by Xanthomonas albilineans with its reduced artillery to spread within sugarcane xylem vesselsQ34484330
Evolutionary history of the plant pathogenic bacterium Xanthomonas axonopodisQ34625838
Comparative genomic and transcriptome analyses of pathotypes of Xanthomonas citri subsp. citri provide insights into mechanisms of bacterial virulence and host rangeQ34939103
Genomic survey of pathogenicity determinants and VNTR markers in the cassava bacterial pathogen Xanthomonas axonopodis pv. Manihotis strain CIO151.Q35053206
BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisonsQ35185871
PGAP: pan-genomes analysis pipelineQ35708459
Xanthomonas axonopodis pv. citri: factors affecting successful eradication of citrus cankerQ37766635
P433issue20
P407language of work or nameEnglishQ1860
P921main subjectCitrus cankerQ2955986
P6104maintained by WikiProjectWikiProject EcologyQ10818384
P304page(s)6266-6279
P577publication date2014-08-01
P1433published inApplied and Environmental MicrobiologyQ4781593
P1476titleGenomic insights into the evolutionary origin of Xanthomonas axonopodis pv. citri and its ecological relatives
P478volume80

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cites work (P2860)
Q57802942Complete genome sequence reveals evolutionary dynamics of an emerging and variant pathovar of Xanthomonas euvesicatoria
Q40309314Ecological and Evolutionary Insights into Xanthomonas citri Pathovar Diversity.
Q58101207Genomic analysis of the Phalaenopsis pathogen Dickeya sp. PA1, representing the emerging species Dickeya fangzhongdai
Q35675951Phylogenomics of Xanthomonas field strains infecting pepper and tomato reveals diversity in effector repertoires and identifies determinants of host specificity
Q38810972SBSPKSv2: structure-based sequence analysis of polyketide synthases and non-ribosomal peptide synthetases.
Q48149616The Xanthomonas euvesicatoria type III effector XopAU is an active protein kinase that manipulates plant MAP kinase signaling
Q91659026Variation and inheritance of the Xanthomonas raxX-raxSTAB gene cluster required for activation of XA21-mediated immunity
Q38972168Xanthomonas citri pv. citri Pathotypes: LPS Structure and Function as Microbe-Associated Molecular Patterns
Q94452500Xanthomonas diversity, virulence and plant-pathogen interactions
Q64102550pv. Affecting Grapevine in Brazil: Emergence of a Successful Monomorphic Pathogen

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