Unambiguous identification of miRNA:target site interactions by different types of ligation reactions

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Unambiguous identification of miRNA:target site interactions by different types of ligation reactions is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/J.MOLCEL.2014.03.049
P932PMC publication ID4181535
P698PubMed publication ID24857550
P5875ResearchGate publication ID262609407

P50authorNikolaus RajewskyQ1991647
Eva GottweinQ19866898
Marcel SchillingQ56988227
Mark ManzanoQ124261938
P2093author name stringStefanie Grosswendt
Filippos Klironomos
Andrei Filipchyk
Margareta Herzog
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RNA 3'-terminal phosphate cyclase activity and RNA ligation in HeLa cell extractQ24609578
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miRTarBase: a database curates experimentally validated microRNA-target interactionsQ24613026
The C. elegans microRNA let-7 binds to imperfect let-7 complementary sites from the lin-41 3'UTRQ24623931
Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammalsQ24630840
Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIPQ24630900
Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegansQ24632455
Weak seed-pairing stability and high target-site abundance decrease the proficiency of lsy-6 and other microRNAsQ24635151
Argonaute HITS-CLIP decodes microRNA-mRNA interaction mapsQ24645826
Kaposi's sarcoma-associated herpesvirus encodes a mimic of cellular miR-23Q37252707
Biological basis for restriction of microRNA targets to the 3' untranslated region in mammalian mRNAsQ37269849
MicroRNA target site identification by integrating sequence and binding informationQ37283636
Isolation and characterization of an RNA ligase from HeLa cells.Q37676319
Transcriptome-wide miR-155 binding map reveals widespread noncanonical microRNA targetingQ38320111
The impact of miRNA target sites in coding sequences and in 3'UTRsQ38336299
A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteinsQ45169446
Transcriptome-wide analysis of regulatory interactions of the RNA-binding protein HuR.Q52894285
A biophysical miRNA-mRNA interaction model infers canonical and noncanonical targetsQ56270401
Perfect seed pairing is not a generally reliable predictor for miRNA-target interactionsQ80143454
A viral microRNA functions as an orthologue of cellular miR-155Q24652947
The impact of microRNAs on protein outputQ24653549
miR-24 Inhibits cell proliferation by targeting E2F2, MYC, and other cell-cycle genes via binding to "seedless" 3'UTR microRNA recognition elementsQ24656666
Kaposi's sarcoma-associated herpesvirus encodes an ortholog of miR-155Q24681400
Enhancement of the Seed-Target Recognition Step in RNA Silencing by a PIWI/MID Domain ProteinQ27653626
The Structure of Human Argonaute-2 in Complex with miR-20aQ27681032
Combinatorial microRNA target predictionsQ27860510
Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targetsQ27860792
Widespread changes in protein synthesis induced by microRNAsQ27860886
MicroRNA-directed cleavage of HOXB8 mRNAQ28131834
Single-stranded antisense siRNAs guide target RNA cleavage in RNAiQ28201784
Identification of virus-encoded microRNAsQ28259309
Regulation by let-7 and lin-4 miRNAs results in target mRNA degradationQ28268899
Regulation of mRNA translation and stability by microRNAsQ29547304
microRNA target predictions in animalsQ29616081
Micro RNAs are complementary to 3' UTR sequence motifs that mediate negative post-transcriptional regulationQ29618303
Identification of microRNAs of the herpesvirus familyQ29618671
Circular RNAs are a large class of animal RNAs with regulatory potencyQ29620042
PARma: identification of microRNA target sites in AGO-PAR-CLIP dataQ30657908
Critical role of the virus-encoded microRNA-155 ortholog in the induction of Marek's disease lymphomasQ33839462
Cloning and identification of a microRNA cluster within the latency-associated region of Kaposi's sarcoma-associated herpesvirusQ33883910
Expanding the microRNA targeting code: functional sites with centered pairingQ34125341
Kaposi's Sarcoma-Associated Herpesvirus microRNAsQ34273195
Transcriptional origin of Kaposi's sarcoma-associated herpesvirus microRNAsQ34434808
A microRNA encoded by Kaposi sarcoma-associated herpesvirus promotes B-cell expansion in vivoQ34490029
Virus-encoded microRNAs: an overview and a look to the futureQ34544400
A combined computational and microarray-based approach identifies novel microRNAs encoded by human gamma-herpesvirusesQ34547697
A Kaposi's sarcoma-associated herpesvirus-encoded ortholog of microRNA miR-155 induces human splenic B-cell expansion in NOD/LtSz-scid IL2Rγnull miceQ35382266
Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP responseQ35494003
In vivo and transcriptome-wide identification of RNA binding protein target sitesQ35659976
microRNA-independent recruitment of Argonaute 1 to nanos mRNA through the Smaug RNA-binding proteinQ36509095
An alternative mode of microRNA target recognitionQ36522819
Argonaute divides its RNA guide into domains with distinct functions and RNA-binding propertiesQ36678555
Mapping the human miRNA interactome by CLASH reveals frequent noncanonical bindingQ36833119
CLIP-based prediction of mammalian microRNA binding sitesQ37080363
P433issue6
P304page(s)1042-1054
P577publication date2014-05-22
P1433published inMolecular CellQ3319468
P1476titleUnambiguous identification of miRNA:target site interactions by different types of ligation reactions
P478volume54

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